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Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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2003 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
MED28
ENSSSCG00000029989
ENSG00000118579
Mediator of RNA polymerase II transcription subunit 28
Low tissue specificity
Detected in all
MED31
ENSSSCG00000027100
ENSG00000108590
Mediator complex subunit 31
Low tissue specificity
Detected in all
MED4
ENSSSCG00000035098
ENSG00000136146
Mediator complex subunit 4
Low tissue specificity
Detected in all
MED7
ENSSSCG00000017058
ENSG00000155868
Mediator of RNA polymerase II transcription subunit 7
Low tissue specificity
Detected in all
MEMO1
ENSSSCG00000008515
ENSG00000162959
Protein MEMO1
Low tissue specificity
Detected in all
METAP2
ENSSSCG00000030608
ENSG00000111142
Methionyl aminopeptidase 2
Low tissue specificity
Detected in all
METTL14
ENSSSCG00000009113
ENSG00000145388
Methyltransferase like 14
Low tissue specificity
Detected in all
METTL16
ENSSSCG00000017832
ENSG00000127804
Methyltransferase like 16
Low tissue specificity
Detected in all
METTL18
ENSSSCG00000006285
ENSG00000171806
Methyltransferase like 18
Low tissue specificity
Detected in all
MFAP3
ENSSSCG00000034706
ENSG00000037749
Microfibril associated protein 3
Low tissue specificity
Detected in all
MFF
ENSSSCG00000031572
Mitochondrial fission factor
Low tissue specificity
Detected in all
MFN1
ENSSSCG00000039285
ENSG00000171109
Mitofusin-1
Low tissue specificity
Detected in all
MFSD1
ENSSSCG00000026018
ENSG00000118855
Major facilitator superfamily domain containing 1
Low tissue specificity
Detected in all
MFSD11
ENSSSCG00000029343
ENSG00000092931
Major facilitator superfamily domain containing 11
Low tissue specificity
Detected in all
MFSD14B
ENSSSCG00000026552
ENSG00000148110
Hippocampus abundant transcript-like protein 1
Low tissue specificity
Detected in all
MFSD8
ENSSSCG00000009075
ENSG00000164073
Major facilitator superfamily domain containing 8
Low tissue specificity
Detected in all
MGEA5
ENSSSCG00000010569
ENSG00000198408
Meningioma expressed antigen 5 (hyaluronidase)
Low tissue specificity
Detected in all
MIB1
ENSSSCG00000025478
ENSG00000101752
Mindbomb E3 ubiquitin protein ligase 1
Low tissue specificity
Detected in all
MICU2
ENSSSCG00000024667
ENSG00000165487
Mitochondrial calcium uptake 2
Low tissue specificity
Detected in all
MIEN1
ENSSSCG00000017496
ENSG00000141741
Migration and invasion enhancer 1
Low tissue specificity
Detected in all
MIF
ENSSSCG00000010067
ENSG00000240972
Macrophage migration inhibitory factor
Low tissue specificity
Detected in all
MIGA1
ENSSSCG00000003770
ENSG00000180488
Mitoguardin 1
Low tissue specificity
Detected in all
MINDY3
ENSSSCG00000011045
ENSG00000148481
MINDY lysine 48 deubiquitinase 3
Tissue enhanced
Detected in all
lens:
86.6
MINPP1
ENSSSCG00000010435
ENSG00000107789
Multiple inositol-polyphosphate phosphatase 1
Tissue enriched
Detected in all
lens:
60.4
MIS12
ENSSSCG00000034958
ENSG00000167842
MIS12, kinetochore complex component
Low tissue specificity
Detected in all
MITD1
ENSSSCG00000008185
ENSG00000158411
Microtubule interacting and trafficking domain containing 1
Low tissue specificity
Detected in all
MKKS
ENSSSCG00000007064
ENSG00000125863
McKusick-Kaufman syndrome
Low tissue specificity
Detected in all
MKLN1
ENSSSCG00000016549
ENSG00000128585
Muskelin 1
Low tissue specificity
Detected in all
MKRN1
ENSSSCG00000016498
ENSG00000133606
Makorin ring finger protein 1
Tissue enhanced
Detected in all
testis:
96.3
MLF2
ENSSSCG00000000690
ENSG00000089693
Myeloid leukemia factor 2
Low tissue specificity
Detected in all
MLH1
ENSSSCG00000024222
ENSG00000076242
DNA mismatch repair protein Mlh1
Low tissue specificity
Detected in all
MMADHC
ENSSSCG00000028646
ENSG00000168288
Methylmalonic aciduria and homocystinuria, cblD type
Tissue enhanced
Detected in all
lens:
37.7
MMGT1
ENSSSCG00000025854
ENSG00000169446
Membrane magnesium transporter 1 precursor
Low tissue specificity
Detected in all
MNAT1
ENSSSCG00000005090
ENSG00000020426
CDK-activating kinase assembly factor MAT1
Low tissue specificity
Detected in all
MOBKL3
ENSSSCG00000016079
Mps one binder kinase activator-like 3
Low tissue specificity
Detected in all
MOCS2
ENSSSCG00000016888
ENSG00000164172
Molybdenum cofactor synthesis 2
Low tissue specificity
Detected in all
MOCS3
ENSSSCG00000007475
ENSG00000124217
Adenylyltransferase and sulfurtransferase MOCS3
Low tissue specificity
Detected in all
MON1B
ENSSSCG00000002701
ENSG00000103111
MON1 homolog B, secretory trafficking associated
Low tissue specificity
Detected in all
MON2
ENSSSCG00000000458
ENSG00000061987
MON2 homolog, regulator of endosome-to-Golgi trafficking
Low tissue specificity
Detected in all
MORC3
ENSSSCG00000012055
ENSG00000159256
MORC family CW-type zinc finger 3
Low tissue specificity
Detected in all
MORF4L1
ENSSSCG00000001769
ENSG00000185787
Mortality factor 4 like 1
Low tissue specificity
Detected in all
MORF4L2
ENSSSCG00000012534
ENSG00000123562
Mortality factor 4 like 2
Low tissue specificity
Detected in all
MOSMO
ENSSSCG00000031629
ENSG00000185716
Modulator of smoothened
Low tissue specificity
Detected in all
MOSPD2
ENSSSCG00000012131
ENSG00000130150
Motile sperm domain-containing protein 2
Tissue enhanced
Detected in all
lens:
33.6
MPDU1
ENSSSCG00000017955
ENSG00000129255
Mannose-P-dolichol utilization defect 1 protein
Low tissue specificity
Detected in all
MPHOSPH10
ENSSSCG00000004847
ENSG00000124383
M-phase phosphoprotein 10
Low tissue specificity
Detected in all
MPHOSPH6
ENSSSCG00000034572
ENSG00000135698
M-phase phosphoprotein 6
Low tissue specificity
Detected in all
MPI
ENSSSCG00000024990
ENSG00000178802
Mannose-6-phosphate isomerase
Low tissue specificity
Detected in all
MPP5
ENSSSCG00000002287
ENSG00000072415
Membrane palmitoylated protein 5
Tissue enhanced
Detected in all
thyroid gland:
80.8
MRAP2
ENSSSCG00000026943
ENSG00000135324
Melanocortin 2 receptor accessory protein 2
Tissue enhanced
Detected in many
cervix:
61.1
endometrium:
22.3
male glands:
25.1
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