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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
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16
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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2003 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
ITFG1
ENSSSCG00000033527
ENSG00000129636
Integrin alpha FG-GAP repeat containing 1
Low tissue specificity
Detected in all
ITM2C
ENSSSCG00000016267
ENSG00000135916
Integral membrane protein 2C CT-BRI3
Low tissue specificity
Detected in all
ITPA
ENSSSCG00000035995
ENSG00000125877
Inosine triphosphatase
Low tissue specificity
Detected in all
JAGN1
ENSSSCG00000032623
ENSG00000171135
Jagunal homolog 1
Low tissue specificity
Detected in all
JKAMP
ENSSSCG00000034798
ENSG00000050130
JNK1/MAPK8 associated membrane protein
Low tissue specificity
Detected in all
KATNBL1
ENSSSCG00000002245
ENSG00000134152
Katanin regulatory subunit B1 like 1
Low tissue specificity
Detected in all
KBTBD2
ENSSSCG00000022464
ENSG00000170852
Kelch repeat and BTB domain containing 2
Low tissue specificity
Detected in all
KBTBD3
ENSSSCG00000014999
ENSG00000182359
Kelch repeat and BTB domain containing 3
Tissue enhanced
Detected in all
brain:
35.2
KBTBD8
ENSSSCG00000011500
ENSG00000163376
Kelch repeat and BTB domain containing 8
Low tissue specificity
Detected in all
KCMF1
ENSSSCG00000008242
ENSG00000176407
Potassium channel modulatory factor 1
Low tissue specificity
Detected in all
KIAA1468
ENSSSCG00000004899
ENSG00000134444
KIAA1468
Low tissue specificity
Detected in all
KIAA2026
ENSSSCG00000005205
ENSG00000183354
KIAA2026
Low tissue specificity
Detected in all
KIF1BP
ENSSSCG00000010248
ENSG00000198954
KIF1 binding protein
Tissue enhanced
Detected in all
brain:
31.2
KIF2A
ENSSSCG00000030186
ENSG00000068796
Kinesin-like protein KIF2A
Low tissue specificity
Detected in all
KIF5B
ENSSSCG00000011027
ENSG00000170759
Kinesin family member 5B
Low tissue specificity
Detected in all
KLHDC1
ENSSSCG00000032489
ENSG00000197776
Kelch domain containing 1
Low tissue specificity
Detected in all
KLHDC10
ENSSSCG00000027131
ENSG00000128607
Kelch domain containing 10
Tissue enhanced
Detected in all
pituitary gland:
56.6
KLHDC2
ENSSSCG00000005009
ENSG00000165516
Kelch domain containing 2
Low tissue specificity
Detected in all
KLHL11
ENSSSCG00000032404
ENSG00000178502
Kelch like family member 11
Low tissue specificity
Detected in all
KLHL20
ENSSSCG00000015497
ENSG00000076321
Kelch like family member 20
Low tissue specificity
Detected in all
KLHL28
ENSSSCG00000004996
ENSG00000179454
Kelch like family member 28
Low tissue specificity
Detected in all
KLHL8
ENSSSCG00000009226
ENSG00000145332
Kelch like family member 8
Tissue enhanced
Detected in all
choroid plexus:
34.7
KLHL9
ENSSSCG00000005150
ENSG00000198642
Kelch like family member 9
Low tissue specificity
Detected in all
KPNA1
ENSSSCG00000028475
ENSG00000114030
Importin subunit alpha-5
Tissue enhanced
Detected in all
lens:
81.4
KPNA3
ENSSSCG00000024125
ENSG00000102753
Importin subunit alpha-4
Tissue enhanced
Detected in all
lens:
95.6
KPNA4
ENSSSCG00000031077
ENSG00000186432
Karyopherin subunit alpha 4
Tissue enhanced
Detected in all
lens:
105.1
KPNA5
ENSSSCG00000004262
ENSG00000196911
Karyopherin subunit alpha 5
Low tissue specificity
Detected in all
KPNA6
ENSSSCG00000034017
ENSG00000025800
Karyopherin subunit alpha 6
Tissue enhanced
Detected in all
cornea:
64.4
KPNB1
ENSSSCG00000017514
ENSG00000108424
Karyopherin subunit beta 1
Tissue enhanced
Detected in all
lens:
100.8
KRAS
ENSSSCG00000026969
ENSG00000133703
KRAS proto-oncogene, GTPase
Low tissue specificity
Detected in all
KRIT1
ENSSSCG00000015313
ENSG00000001631
KRIT1, ankyrin repeat containing
Low tissue specificity
Detected in all
KRR1
ENSSSCG00000033524
ENSG00000111615
KRR1, small subunit processome component homolog
Low tissue specificity
Detected in all
LAMP2
ENSSSCG00000012604
ENSG00000005893
Lysosome-associated membrane glycoprotein 2 isoform 1 precursor
Low tissue specificity
Detected in all
LAMTOR2
ENSSSCG00000006499
ENSG00000116586
Ragulator complex protein LAMTOR2
Low tissue specificity
Detected in all
LAMTOR3
ENSSSCG00000009176
ENSG00000109270
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3
Low tissue specificity
Detected in all
LANCL1
ENSSSCG00000016158
ENSG00000115365
LanC like 1
Tissue enhanced
Detected in all
brain:
39.9
LARP4
ENSSSCG00000028516
ENSG00000161813
La ribonucleoprotein domain family member 4
Tissue enhanced
Detected in all
lens:
74.1
LARS
ENSSSCG00000014411
ENSG00000133706
Leucyl-tRNA synthetase
Low tissue specificity
Detected in all
LCMT2
ENSSSCG00000004711
ENSG00000168806
Leucine carboxyl methyltransferase 2
Low tissue specificity
Detected in all
LDAH
ENSSSCG00000025357
ENSG00000118961
Lipid droplet associated hydrolase
Low tissue specificity
Detected in all
LEAP2
ENSSSCG00000032490
ENSG00000164406
Liver-expressed antimicrobial peptide 2 precursor
Tissue enhanced
Detected in all
liver:
45.0
LEO1
ENSSSCG00000004625
ENSG00000166477
LEO1 homolog, Paf1/RNA polymerase II complex component
Low tissue specificity
Detected in all
LEPROTL1
ENSSSCG00000038085
ENSG00000104660
Leptin receptor overlapping transcript like 1
Low tissue specificity
Detected in all
LETMD1
ENSSSCG00000032096
ENSG00000050426
LETM1 domain containing 1
Low tissue specificity
Detected in all
LIAS
ENSSSCG00000029385
ENSG00000121897
Lipoyl synthase, mitochondrial
Low tissue specificity
Detected in all
LIN52
ENSSSCG00000027564
ENSG00000205659
Protein lin-52 homolog
Low tissue specificity
Detected in all
LIN7C
ENSSSCG00000022806
ENSG00000148943
Lin-7 homolog C, crumbs cell polarity complex component
Low tissue specificity
Detected in all
LINS1
ENSSSCG00000004820
ENSG00000140471
Lines homolog 1
Tissue enhanced
Detected in all
lens:
41.4
LIPM
ENSSSCG00000010444
ENSG00000173239
Lipase family member M
Group enriched
Detected in some
lens:
6.5
skin:
24.1
LMBR1
ENSSSCG00000016412
ENSG00000105983
Limb development membrane protein 1
Low tissue specificity
Detected in all
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