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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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2003 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
HMGB1
ENSSSCG00000009327
ENSG00000189403
High mobility group protein B1
Low tissue specificity
Detected in all
HMGN4
ENSSSCG00000020696
ENSG00000182952
High mobility group nucleosomal binding domain 4
Low tissue specificity
Detected in all
HNMT
ENSSSCG00000035195
ENSG00000150540
Histamine N-methyltransferase
Low tissue specificity
Detected in all
HNRNPD
ENSSSCG00000009249
ENSG00000138668
Heterogeneous nuclear ribonucleoprotein D
Low tissue specificity
Detected in all
HNRNPDL
ENSSSCG00000037245
ENSG00000152795
Heterogeneous nuclear ribonucleoprotein D like
Low tissue specificity
Detected in all
HNRNPH2
ENSSSCG00000033161
ENSG00000126945
Heterogeneous nuclear ribonucleoprotein H2
Low tissue specificity
Detected in all
HNRNPR
ENSSSCG00000023761
ENSG00000125944
Heterogeneous nuclear ribonucleoprotein R
Low tissue specificity
Detected in all
HP1BP3
ENSSSCG00000003511
ENSG00000127483
Heterochromatin protein 1 binding protein 3
Low tissue specificity
Detected in all
HPF1
ENSSSCG00000009711
ENSG00000056050
Histone PARylation factor 1
Low tissue specificity
Detected in all
HPS3
ENSSSCG00000011699
ENSG00000163755
Hermansky-Pudlak syndrome 3 protein
Low tissue specificity
Detected in all
HSBP1
ENSSSCG00000031892
Heat shock factor-binding protein 1
Low tissue specificity
Detected in all
HSD17B12
ENSSSCG00000021739
ENSG00000149084
Hydroxysteroid 17-beta dehydrogenase 12
Low tissue specificity
Detected in all
HSDL1
ENSSSCG00000002681
ENSG00000103160
Hydroxysteroid dehydrogenase like 1
Low tissue specificity
Detected in all
HSF2
ENSSSCG00000004238
ENSG00000025156
Heat shock transcription factor 2
Low tissue specificity
Detected in all
HSP90AA1
ENSSSCG00000002535
ENSG00000080824
Heat shock protein HSP 90-alpha
Low tissue specificity
Detected in all
HSP90AB1
ENSSSCG00000001701
ENSG00000096384
Heat shock protein HSP 90-beta
Low tissue specificity
Detected in all
HSPA13
ENSSSCG00000012007
ENSG00000155304
Heat shock protein family A (Hsp70) member 13
Tissue enhanced
Detected in all
pineal gland:
31.8
pituitary gland:
58.8
HSPA14
ENSSSCG00000011051
ENSG00000187522
Heat shock 70 kDa protein 14
Low tissue specificity
Detected in all
HSPA4
ENSSSCG00000014292
ENSG00000170606
Heat shock protein family A (Hsp70) member 4
Low tissue specificity
Detected in all
HSPA4L
ENSSSCG00000009077
ENSG00000164070
Heat shock protein family A (Hsp70) member 4 like
Tissue enriched
Detected in all
testis:
101.7
HSPA8
ENSSSCG00000015140
ENSG00000109971
Heat shock cognate 71 kDa protein
Low tissue specificity
Detected in all
HSPB11
ENSSSCG00000026264
ENSG00000081870
Heat shock protein family B (small) member 11
Tissue enriched
Detected in all
lens:
77.9
HSPBP1
ENSSSCG00000003288
ENSG00000133265
HSPA (Hsp70) binding protein 1
Low tissue specificity
Detected in all
HSPH1
ENSSSCG00000009334
ENSG00000120694
Heat shock protein 105 kDa
Tissue enhanced
Detected in all
brain:
54.3
HTATIP2
ENSSSCG00000013349
ENSG00000109854
HIV-1 Tat interactive protein 2
Tissue enhanced
Detected in many
stomach:
73.6
HTATSF1
ENSSSCG00000023062
ENSG00000102241
HIV-1 Tat specific factor 1
Low tissue specificity
Detected in all
HTD2
ENSSSCG00000035452
ENSG00000255154
Hydroxyacyl-thioester dehydratase type 2
Low tissue specificity
Detected in all
IARS
ENSSSCG00000008068
ENSG00000196305
Isoleucyl-tRNA synthetase
Low tissue specificity
Detected in all
IBTK
ENSSSCG00000004460
ENSG00000005700
Inhibitor of Bruton tyrosine kinase
Low tissue specificity
Detected in all
IDE
ENSSSCG00000010470
ENSG00000119912
Insulin degrading enzyme
Low tissue specificity
Detected in all
IL6ST
ENSSSCG00000016916
ENSG00000134352
Interleukin-6 receptor subunit beta precursor
Low tissue specificity
Detected in all
ILF2
ENSSSCG00000028553
ENSG00000143621
Interleukin enhancer binding factor 2
Low tissue specificity
Detected in all
IMP4
ENSSSCG00000015734
ENSG00000136718
IMP4, U3 small nucleolar ribonucleoprotein
Low tissue specificity
Detected in all
IMPA1
ENSSSCG00000033791
ENSG00000133731
Inositol monophosphatase 1
Low tissue specificity
Detected in all
IMPACT
ENSSSCG00000003713
ENSG00000154059
Impact RWD domain protein
Low tissue specificity
Detected in all
IMPAD1
ENSSSCG00000032846
ENSG00000104331
Inositol monophosphatase 3
Low tissue specificity
Detected in all
ING2
ENSSSCG00000024555
ENSG00000168556
Inhibitor of growth family member 2
Tissue enhanced
Detected in all
lens:
35.3
ING3
ENSSSCG00000016619
ENSG00000071243
Inhibitor of growth protein 3
Low tissue specificity
Detected in all
INIP
ENSSSCG00000026194
ENSG00000148153
SOSS complex subunit C
Low tissue specificity
Detected in all
INTS2
ENSSSCG00000017673
ENSG00000108506
Integrator complex subunit 2
Low tissue specificity
Detected in all
IP6K2
ENSSSCG00000040922
ENSG00000068745
Inositol hexakisphosphate kinase 2
Low tissue specificity
Detected in all
IPMK
ENSSSCG00000040863
ENSG00000151151
Inositol polyphosphate multikinase
Tissue enhanced
Detected in all
testis:
36.3
IPO11
ENSSSCG00000016938
ENSG00000086200
Importin 11
Low tissue specificity
Detected in all
IPO5
ENSSSCG00000009509
ENSG00000065150
Importin-5
Tissue enhanced
Detected in all
lens:
96.8
testis:
62.7
IPO7
ENSSSCG00000028886
ENSG00000205339
Importin 7
Low tissue specificity
Detected in all
IPO8
ENSSSCG00000000534
ENSG00000133704
Importin 8
Tissue enriched
Detected in all
lens:
78.3
IPP
ENSSSCG00000040796
ENSG00000197429
Intracisternal A particle-promoted polypeptide
Low tissue specificity
Detected in all
IREB2
ENSSSCG00000001756
ENSG00000136381
Iron-responsive element-binding protein 2
Low tissue specificity
Detected in all
ISOC1
ENSSSCG00000014258
ENSG00000066583
Isochorismatase domain containing 1
Tissue enhanced
Detected in all
male glands:
35.7
ITCH
ENSSSCG00000007280
ENSG00000078747
Itchy E3 ubiquitin protein ligase
Low tissue specificity
Detected in all
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