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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Other congenital disorders
Other diseases
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Subclass
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Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
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14
15
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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2003 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
FIP1L1
ENSSSCG00000031636
ENSG00000145216
Factor interacting with PAPOLA and CPSF1
Low tissue specificity
Detected in all
FKBP2
ENSSSCG00000033757
ENSG00000173486
FK506 binding protein 2
Low tissue specificity
Detected in all
FKBP3
ENSSSCG00000021217
ENSG00000100442
Peptidyl-prolyl cis-trans isomerase FKBP3
Tissue enhanced
Detected in all
lens:
67.7
skeletal muscle:
60.0
FKBP4
ENSSSCG00000000743
ENSG00000004478
Peptidyl-prolyl cis-trans isomerase FKBP4
Tissue enhanced
Detected in all
testis:
114.9
FKTN
ENSSSCG00000005427
ENSG00000106692
Fukutin
Low tissue specificity
Detected in all
FLVCR1
ENSSSCG00000015590
ENSG00000162769
Feline leukemia virus subgroup C receptor-related protein 1
Low tissue specificity
Detected in all
FMR1
ENSSSCG00000012727
ENSG00000102081
Fragile X mental retardation 1
Low tissue specificity
Detected in all
FNIP1
ENSSSCG00000014269
ENSG00000217128
Folliculin interacting protein 1
Low tissue specificity
Detected in all
FNTA
ENSSSCG00000037221
ENSG00000168522
Farnesyltransferase, CAAX box, alpha
Tissue enhanced
Detected in all
brain:
57.4
FOCAD
ENSSSCG00000028406
ENSG00000188352
Focadhesin
Tissue enhanced
Detected in all
choroid plexus:
66.6
FOPNL
ENSSSCG00000033377
ENSG00000133393
FGFR1OP N-terminal like
Low tissue specificity
Detected in all
FPGT
ENSSSCG00000003783
ENSG00000254685
Fucose-1-phosphate guanylyltransferase
Low tissue specificity
Detected in all
FRA10AC1
ENSSSCG00000024359
ENSG00000148690
Protein FRA10AC1
Low tissue specificity
Detected in all
FSD1L
ENSSSCG00000005426
ENSG00000106701
Fibronectin type III and SPRY domain containing 1 like
Tissue enhanced
Detected in all
choroid plexus:
46.0
FUCA2
ENSSSCG00000004133
ENSG00000001036
Alpha-L-fucosidase 2
Low tissue specificity
Detected in all
FUNDC1
ENSSSCG00000012258
ENSG00000069509
FUN14 domain containing 1
Low tissue specificity
Detected in all
FUT11
ENSSSCG00000035523
ENSG00000196968
Fucosyltransferase 11
Low tissue specificity
Detected in all
FXR1
ENSSSCG00000011769
ENSG00000114416
FMR1 autosomal homolog 1
Tissue enhanced
Detected in all
skeletal muscle:
113.4
FYTTD1
ENSSSCG00000027139
ENSG00000122068
Forty-two-three domain containing 1
Low tissue specificity
Detected in all
G2E3
ENSSSCG00000001974
ENSG00000092140
G2/M-phase specific E3 ubiquitin protein ligase
Low tissue specificity
Detected in all
G3BP2
ENSSSCG00000022940
ENSG00000138757
G3BP stress granule assembly factor 2
Low tissue specificity
Detected in all
G6PC3
ENSSSCG00000017365
ENSG00000141349
Glucose-6-phosphatase catalytic subunit 3
Low tissue specificity
Detected in all
GABARAPL2
ENSSSCG00000002707
ENSG00000034713
GABA type A receptor associated protein like 2
Tissue enhanced
Detected in all
brain:
60.7
lens:
74.1
pineal gland:
52.4
GALNT1
ENSSSCG00000003743
ENSG00000141429
Polypeptide N-acetylgalactosaminyltransferase 1
Low tissue specificity
Detected in all
GALNT11
ENSSSCG00000016430
ENSG00000178234
Polypeptide N-acetylgalactosaminyltransferase 11
Low tissue specificity
Detected in all
GAR1
ENSSSCG00000009137
ENSG00000109534
GAR1 ribonucleoprotein
Low tissue specificity
Detected in all
GARS
ENSSSCG00000016677
ENSG00000106105
Glycyl-tRNA synthetase
Low tissue specificity
Detected in all
GATAD1
ENSSSCG00000031835
ENSG00000157259
GATA zinc finger domain containing 1
Low tissue specificity
Detected in all
GCA
ENSSSCG00000027472
ENSG00000115271
Grancalcin
Tissue enhanced
Detected in many
brain:
37.0
GCLM
ENSSSCG00000037549
ENSG00000023909
Glutamate-cysteine ligase modifier subunit
Tissue enhanced
Detected in all
lens:
63.3
GDAP2
ENSSSCG00000006728
ENSG00000196505
Ganglioside induced differentiation associated protein 2
Low tissue specificity
Detected in all
GDE1
ENSSSCG00000029212
ENSG00000006007
Glycerophosphodiester phosphodiesterase 1
Low tissue specificity
Detected in all
GDF9
ENSSSCG00000014288
ENSG00000164404
Growth/differentiation factor 9 precursor
Low tissue specificity
Detected in all
GEMIN2
ENSSSCG00000004985
ENSG00000092208
Gem nuclear organelle associated protein 2
Low tissue specificity
Detected in all
GEMIN6
ENSSSCG00000008482
ENSG00000152147
Gem nuclear organelle associated protein 6
Low tissue specificity
Detected in all
GGPS1
ENSSSCG00000031680
ENSG00000152904
Geranylgeranyl diphosphate synthase 1
Low tissue specificity
Detected in all
GHITM
ENSSSCG00000010345
ENSG00000165678
Growth hormone-inducible transmembrane protein
Tissue enhanced
Detected in all
pineal gland:
59.4
GIN1
ENSSSCG00000025287
ENSG00000145723
Gypsy retrotransposon integrase 1
Low tissue specificity
Detected in all
GKAP1
ENSSSCG00000026087
ENSG00000165113
G kinase anchoring protein 1
Tissue enhanced
Detected in all
testis:
49.4
GLG1
ENSSSCG00000030420
ENSG00000090863
Golgi glycoprotein 1
Low tissue specificity
Detected in all
GLMN
ENSSSCG00000006904
ENSG00000174842
Glomulin, FKBP associated protein
Tissue enhanced
Detected in all
pineal gland:
32.9
retina:
37.6
GLRX2
ENSSSCG00000031991
ENSG00000023572
Glutaredoxin 2
Low tissue specificity
Detected in all
GLRX3
ENSSSCG00000010759
ENSG00000108010
Glutaredoxin-3
Tissue enhanced
Detected in all
lens:
86.6
GLS
ENSSSCG00000016056
ENSG00000115419
Glutaminase
Low tissue specificity
Detected in all
GMCL1
ENSSSCG00000008335
ENSG00000087338
Germ cell-less, spermatogenesis associated 1
Tissue enhanced
Detected in all
testis:
80.9
GMFB
ENSSSCG00000026294
ENSG00000197045
Glia maturation factor beta
Tissue enhanced
Detected in all
brain:
40.7
GMNN
ENSSSCG00000001095
ENSG00000112312
Geminin, DNA replication inhibitor
Low tissue specificity
Detected in all
GMPS
ENSSSCG00000028855
ENSG00000163655
Guanine monophosphate synthase
Low tissue specificity
Detected in all
GNA13
ENSSSCG00000039336
ENSG00000120063
G protein subunit alpha 13
Low tissue specificity
Detected in all
GNAI1
ENSSSCG00000015407
ENSG00000127955
G protein subunit alpha i1
Tissue enhanced
Detected in many
brain:
40.3
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