We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
910 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 19 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
HECW1
ENSSSCG00000036443
ENSG00000002746
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
Group enriched
Detected in some
brain:
17.4
kidney:
27.3
pineal gland:
14.3
retina:
9.4
HES3
ENSSSCG00000003370
ENSG00000173673
Hes family bHLH transcription factor 3
Tissue enhanced
Detected in some
brain:
7.0
retina:
5.2
HIST3H2A
ENSSSCG00000040622
ENSG00000181218
Histone cluster 3 H2A
Tissue enhanced
Detected in many
brain:
23.1
pituitary gland:
23.2
HMG20A
ENSSSCG00000001871
ENSG00000140382
High mobility group 20A
Low tissue specificity
Detected in all
HMGCLL1
ENSSSCG00000001479
ENSG00000146151
3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1
Tissue enhanced
Detected in many
brain:
20.2
HPCAL1
ENSSSCG00000003663
ENSG00000115756
Hippocalcin-like protein 1
Tissue enhanced
Detected in all
brain:
70.4
HRH3
ENSSSCG00000038578
ENSG00000101180
Histamine receptor H3
Tissue enriched
Detected in some
brain:
24.0
HSD17B6
ENSSSCG00000027854
ENSG00000025423
Hydroxysteroid 17-beta dehydrogenase 6
Group enriched
Detected in some
brain:
22.5
liver:
82.6
male glands:
22.4
HSPA12A
ENSSSCG00000036758
ENSG00000165868
Heat shock protein family A (Hsp70) member 12A
Tissue enhanced
Detected in many
brain:
48.2
vagus nerve:
36.5
HTR1A
ENSSSCG00000016940
ENSG00000178394
5-hydroxytryptamine receptor 1A
Group enriched
Detected in some
brain:
23.9
testis:
6.3
HTR2C
ENSSSCG00000012593
ENSG00000147246
5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled
Tissue enriched
Detected in some
choroid plexus:
103.0
ICA1L
ENSSSCG00000016115
ENSG00000163596
Islet cell autoantigen 1 like
Group enriched
Detected in many
brain:
16.6
testis:
52.6
IFITM10
ENSSSCG00000033809
ENSG00000244242
Interferon induced transmembrane protein 10
Tissue enriched
Detected in some
brain:
21.2
IGSF1
ENSSSCG00000012667
ENSG00000147255
Immunoglobulin superfamily member 1
Tissue enriched
Detected in some
pituitary gland:
94.6
ILDR2
ENSSSCG00000035124
ENSG00000143195
Immunoglobulin like domain containing receptor 2
Tissue enhanced
Detected in many
liver:
19.0
INA
ENSSSCG00000010595
ENSG00000148798
Internexin neuronal intermediate filament protein alpha
Group enriched
Detected in some
brain:
46.6
choroid plexus:
56.8
pineal gland:
49.5
pituitary gland:
33.9
retina:
22.2
INPP5F
ENSSSCG00000010687
ENSG00000198825
Inositol polyphosphate-5-phosphatase F
Tissue enriched
Detected in many
brain:
124.7
INSM1
ENSSSCG00000007106
ENSG00000173404
INSM transcriptional repressor 1
Group enriched
Detected in some
adrenal gland:
40.6
pituitary gland:
37.6
IQCJ
ENSSSCG00000011728
ENSG00000214216
IQ motif containing J
Tissue enriched
Detected in some
brain:
27.4
IQSEC3
ENSSSCG00000000748
ENSG00000120645
IQ motif and Sec7 domain 3
Group enriched
Detected in some
brain:
32.5
retina:
15.0
JPH3
ENSSSCG00000002653
ENSG00000154118
Junctophilin 3
Group enriched
Detected in some
brain:
36.0
mesothelial tissue:
9.7
JPH4
ENSSSCG00000002014
ENSG00000092051
Junctophilin 4
Group enriched
Detected in many
brain:
44.3
testis:
30.8
KCNA2
ENSSSCG00000037709
ENSG00000177301
Potassium voltage-gated channel subfamily A member 2
Tissue enhanced
Detected in some
brain:
39.7
choroid plexus:
13.6
retina:
7.8
KCNAB3
ENSSSCG00000037973
ENSG00000170049
Potassium voltage-gated channel subfamily A regulatory beta subunit 3
Tissue enhanced
Detected in all
brain:
22.0
KCNB2
ENSSSCG00000006185
ENSG00000182674
Potassium voltage-gated channel subfamily B member 2
Tissue enhanced
Detected in some
brain:
16.8
pineal gland:
23.1
retina:
32.8
KCNC1
ENSSSCG00000013374
ENSG00000129159
Potassium voltage-gated channel subfamily C member 1
Group enriched
Detected in many
brain:
46.6
retina:
12.5
KCNC2
ENSSSCG00000000516
ENSG00000166006
Potassium voltage-gated channel subfamily C member 2
Tissue enhanced
Detected in many
brain:
34.0
KCNC3
ENSSSCG00000003214
ENSG00000131398
Potassium voltage-gated channel subfamily C member 3
Group enriched
Detected in many
brain:
35.1
retina:
10.2
KCNC4
ENSSSCG00000006810
ENSG00000116396
Potassium voltage-gated channel subfamily C member 4
Tissue enhanced
Detected in many
adrenal gland:
17.9
brain:
25.4
skeletal muscle:
22.0
KCND2
ENSSSCG00000016621
ENSG00000184408
Potassium voltage-gated channel subfamily D member 2
Tissue enriched
Detected in many
brain:
79.7
KCNH5
ENSSSCG00000034726
ENSG00000140015
Potassium voltage-gated channel subfamily H member 5
Group enriched
Detected in some
brain:
29.4
pineal gland:
8.4
retina:
22.2
KCNIP4
ENSSSCG00000023934
ENSG00000185774
Potassium voltage-gated channel interacting protein 4
Tissue enhanced
Detected in some
brain:
24.7
retina:
11.3
small intestine:
12.2
smooth muscle:
10.4
KCNJ6
ENSSSCG00000012065
ENSG00000157542
Potassium voltage-gated channel subfamily J member 6
Group enriched
Detected in some
brain:
25.2
pituitary gland:
8.7
retina:
6.3
KCNJ9
ENSSSCG00000006393
ENSG00000162728
Potassium voltage-gated channel subfamily J member 9
Tissue enriched
Detected in some
brain:
24.1
KCNK12
ENSSSCG00000008427
ENSG00000184261
Potassium two pore domain channel subfamily K member 12
Tissue enhanced
Detected in some
adrenal gland:
6.1
brain:
18.1
KCNK2
ENSSSCG00000023451
ENSG00000082482
Potassium channel subfamily K member 2
Tissue enhanced
Detected in many
adrenal gland:
25.7
brain:
27.2
pituitary gland:
14.7
KCNN1
ENSSSCG00000013892
ENSG00000105642
Potassium calcium-activated channel subfamily N member 1
Tissue enriched
Detected in some
brain:
15.5
KCNQ2
ENSSSCG00000031746
ENSG00000075043
Potassium voltage-gated channel subfamily Q member 2
Tissue enriched
Detected in some
brain:
26.5
KCNT1
ENSSSCG00000005762
ENSG00000107147
Potassium sodium-activated channel subfamily T member 1
Tissue enriched
Detected in many
brain:
40.5
KCNT2
ENSSSCG00000010892
ENSG00000162687
Potassium sodium-activated channel subfamily T member 2
Tissue enhanced
Detected in many
brain:
24.0
heart:
12.7
pituitary gland:
17.4
KHDRBS3
ENSSSCG00000005941
ENSG00000131773
KH RNA binding domain containing, signal transduction associated 3
Group enriched
Detected in many
brain:
38.0
testis:
45.1
KIAA0319
ENSSSCG00000001091
ENSG00000137261
KIAA0319
Tissue enhanced
Detected in some
brain:
19.2
choroid plexus:
9.9
pituitary gland:
11.9
KIAA1549L
ENSSSCG00000013311
ENSG00000110427
KIAA1549 like
Group enriched
Detected in some
brain:
34.5
vagus nerve:
10.9
KIF5A
ENSSSCG00000000439
ENSG00000155980
Kinesin family member 5A
Tissue enriched
Detected in many
brain:
86.8
KIRREL3
ENSSSCG00000015234
ENSG00000149571
Kirre like nephrin family adhesion molecule 3
Tissue enhanced
Detected in many
brain:
19.4
retina:
11.7
KISS1R
ENSSSCG00000013420
ENSG00000116014
KiSS-1 receptor
Tissue enhanced
Detected in some
brain:
5.4
KLC2
ENSSSCG00000012955
ENSG00000174996
Kinesin light chain 2
Tissue enhanced
Detected in all
brain:
41.1
KLHDC8A
ENSSSCG00000023441
ENSG00000162873
Kelch domain containing 8A
Group enriched
Detected in some
brain:
32.8
pineal gland:
28.0
retina:
32.4
KLHL1
ENSSSCG00000009456
ENSG00000150361
Kelch like family member 1
Tissue enhanced
Detected in some
brain:
18.8
pituitary gland:
9.5
retina:
4.4
KLHL3
ENSSSCG00000014321
ENSG00000146021
Kelch like family member 3
Tissue enhanced
Detected in many
liver:
27.0
vagus nerve:
19.8
« prev
| Page
of 19 |
next »