We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
910 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 19 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
CDIP1
ENSSSCG00000007941
ENSG00000089486
Cell death-inducing p53-target protein 1
Low tissue specificity
Detected in all
CDK5
ENSSSCG00000024070
ENSG00000164885
Cyclin-dependent-like kinase 5
Low tissue specificity
Detected in all
CDK5R1
ENSSSCG00000017730
ENSG00000176749
Cyclin dependent kinase 5 regulatory subunit 1
Group enriched
Detected in many
brain:
59.5
lens:
37.3
CDK5R2
ENSSSCG00000021584
ENSG00000171450
Cyclin dependent kinase 5 regulatory subunit 2
Tissue enriched
Detected in some
brain:
49.8
CDKL5
ENSSSCG00000012156
ENSG00000008086
Cyclin dependent kinase like 5
Tissue enhanced
Detected in all
brain:
34.8
CDR1
ENSSSCG00000036655
ENSG00000184258
Cerebellar degeneration related protein 1
Group enriched
Detected in many
brain:
791.0
choroid plexus:
541.4
pineal gland:
560.1
CELF3
ENSSSCG00000006618
ENSG00000159409
CUGBP Elav-like family member 3
Group enriched
Detected in some
adrenal gland:
11.1
brain:
37.0
pineal gland:
29.5
pituitary gland:
30.6
retina:
32.8
CELF4
ENSSSCG00000003748
ENSG00000101489
CUGBP Elav-like family member 4
Tissue enhanced
Detected in many
brain:
31.3
pineal gland:
18.6
retina:
12.7
CELSR2
ENSSSCG00000034360
ENSG00000143126
Cadherin EGF LAG seven-pass G-type receptor 2
Tissue enhanced
Detected in many
brain:
32.1
CELSR3
ENSSSCG00000011360
ENSG00000008300
Cadherin EGF LAG seven-pass G-type receptor 3
Tissue enhanced
Detected in some
brain:
16.7
pituitary gland:
9.2
retina:
9.7
testis:
16.2
CEND1
ENSSSCG00000012845
ENSG00000184524
Cell cycle exit and neuronal differentiation protein 1
Tissue enhanced
Detected in some
brain:
53.1
pineal gland:
20.0
retina:
11.6
CHD5
ENSSSCG00000003366
ENSG00000116254
Chromodomain helicase DNA binding protein 5
Tissue enhanced
Detected in many
brain:
26.9
testis:
27.0
CHGA
ENSSSCG00000002456
ENSG00000100604
Chromogranin-A precursor
Tissue enriched
Detected in some
adrenal gland:
301.0
CHGB
ENSSSCG00000039779
ENSG00000089199
Secretogranin-1 precursor
Group enriched
Detected in some
adrenal gland:
150.2
pituitary gland:
276.8
CHL1
ENSSSCG00000011524
ENSG00000134121
Cell adhesion molecule L1 like
Tissue enhanced
Detected in many
brain:
47.4
pineal gland:
36.4
vagus nerve:
36.8
CHRM5
ENSSSCG00000036662
ENSG00000184984
Cholinergic receptor muscarinic 5
Tissue enriched
Detected in some
brain:
18.9
CHRNA4
ENSSSCG00000039677
ENSG00000101204
Cholinergic receptor nicotinic alpha 4 subunit
Group enriched
Detected in some
adipose tissue:
6.7
brain:
24.4
kidney:
14.7
retina:
12.2
CHRNB2
ENSSSCG00000006545
ENSG00000160716
Cholinergic receptor nicotinic beta 2 subunit
Group enriched
Detected in some
brain:
23.2
retina:
11.7
CHST2
ENSSSCG00000022031
ENSG00000175040
Carbohydrate sulfotransferase 2
Tissue enhanced
Detected in many
brain:
34.6
thyroid gland:
23.3
CHST8
ENSSSCG00000035222
ENSG00000124302
Carbohydrate sulfotransferase 8
Tissue enhanced
Detected in some
brain:
11.1
lymphoid tissue:
12.5
pituitary gland:
16.7
testis:
10.1
CKB
ENSSSCG00000021220
ENSG00000166165
Creatine kinase B-type
Tissue enhanced
Detected in many
brain:
121.7
pineal gland:
104.9
retina:
70.4
smooth muscle:
65.9
CLEC2L
ENSSSCG00000038147
ENSG00000236279
C-type lectin domain family 2 member L
Group enriched
Detected in some
brain:
30.5
choroid plexus:
8.1
heart:
26.3
retina:
8.6
CLSTN3
ENSSSCG00000000672
ENSG00000139182
Calsyntenin 3
Group enriched
Detected in many
brain:
58.8
pineal gland:
44.5
CLVS2
ENSSSCG00000004232
ENSG00000146352
Clavesin 2
Tissue enhanced
Detected in many
brain:
26.9
retina:
12.3
vagus nerve:
11.9
CNIH3
ENSSSCG00000034972
ENSG00000143786
Cornichon family AMPA receptor auxiliary protein 3
Tissue enhanced
Detected in many
adipose tissue:
19.9
brain:
20.2
pituitary gland:
21.4
CNKSR2
ENSSSCG00000012164
ENSG00000149970
Connector enhancer of kinase suppressor of Ras 2
Tissue enhanced
Detected in many
brain:
46.2
lens:
24.9
vagus nerve:
15.1
CNNM1
ENSSSCG00000010536
ENSG00000119946
Cyclin and CBS domain divalent metal cation transport mediator 1
Tissue enhanced
Detected in many
brain:
28.9
endometrium:
9.9
CNR1
ENSSSCG00000004309
ENSG00000118432
Cannabinoid receptor 1
Tissue enriched
Detected in some
brain:
49.8
CNTN4
ENSSSCG00000011527
ENSG00000144619
Contactin 4
Tissue enriched
Detected in many
pineal gland:
89.6
CNTN6
ENSSSCG00000038152
ENSG00000134115
Contactin 6
Tissue enriched
Detected in some
brain:
15.8
CNTNAP1
ENSSSCG00000017393
ENSG00000108797
Contactin associated protein 1
Tissue enhanced
Detected in many
brain:
35.3
pineal gland:
17.0
CNTNAP2
ENSSSCG00000037981
ENSG00000174469
Contactin associated protein like 2
Tissue enhanced
Detected in many
brain:
24.4
cervix:
19.4
pituitary gland:
25.1
thyroid gland:
18.3
CNTNAP4
ENSSSCG00000023125
ENSG00000152910
Contactin associated protein like 4
Group enriched
Detected in some
brain:
25.8
fallopian tube:
6.5
male glands:
22.4
pituitary gland:
11.4
CNTNAP5
ENSSSCG00000015726
ENSG00000155052
Contactin associated protein like 5
Tissue enhanced
Detected in some
brain:
22.6
ductus deferens:
7.4
pineal gland:
16.9
CPLX1
ENSSSCG00000037527
ENSG00000168993
Complexin 1
Tissue enhanced
Detected in some
brain:
72.4
kidney:
15.6
retina:
24.1
CPLX2
ENSSSCG00000033682
ENSG00000145920
Complexin 2
Tissue enriched
Detected in some
brain:
95.7
CPSF4L
ENSSSCG00000040611
ENSG00000187959
Cleavage and polyadenylation specific factor 4 like
Tissue enhanced
Detected in many
male glands:
23.9
retina:
20.1
salivary gland:
18.8
CPT1C
ENSSSCG00000024872
ENSG00000169169
Carnitine palmitoyltransferase 1C
Tissue enhanced
Detected in many
brain:
21.3
pineal gland:
14.5
CREG2
ENSSSCG00000008166
ENSG00000175874
Cellular repressor of E1A stimulated genes 2
Tissue enhanced
Detected in some
brain:
13.7
pineal gland:
2.5
pituitary gland:
3.5
CRMP1
ENSSSCG00000022896
ENSG00000072832
Collapsin response mediator protein 1
Tissue enhanced
Detected in some
brain:
46.6
pineal gland:
17.7
retina:
18.9
CRYM
ENSSSCG00000007849
ENSG00000103316
Crystallin mu
Tissue enhanced
Detected in many
brain:
56.3
male glands:
91.5
pituitary gland:
88.5
CSMD1
ENSSSCG00000015748
ENSG00000183117
CUB and Sushi multiple domains 1
Group enriched
Detected in some
brain:
15.9
smooth muscle:
4.9
testis:
4.6
CSMD2
ENSSSCG00000003622
ENSG00000121904
CUB and Sushi multiple domains 2
Tissue enhanced
Detected in many
brain:
11.1
male glands:
13.9
vagus nerve:
21.5
CSMD3
ENSSSCG00000031031
ENSG00000164796
CUB and Sushi multiple domains 3
Tissue enhanced
Detected in some
brain:
19.5
pineal gland:
7.5
CSPG5
ENSSSCG00000039224
ENSG00000114646
Chondroitin sulfate proteoglycan 5
Tissue enhanced
Detected in all
brain:
32.3
thyroid gland:
18.5
CSRNP3
ENSSSCG00000015906
ENSG00000178662
Cysteine and serine rich nuclear protein 3
Tissue enhanced
Detected in many
brain:
27.4
retina:
21.7
CTNND2
ENSSSCG00000016780
ENSG00000169862
Catenin delta 2
Tissue enhanced
Detected in many
brain:
57.2
pineal gland:
25.0
CTXN2
ENSSSCG00000040204
ENSG00000233932
Cortexin 2
Group enriched
Detected in some
brain:
11.1
pituitary gland:
4.7
CX3CL1
ENSSSCG00000024759
ENSG00000006210
C-X3-C motif chemokine ligand 1
Tissue enhanced
Detected in many
brain:
43.8
CYB5B
ENSSSCG00000033944
ENSG00000103018
Cytochrome b5 type B
Tissue enriched
Detected in all
adrenal gland:
111.6
« prev
| Page
of 19 |
next »