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Gene name
Human disease related genes
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External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
Class
Cancers
Cardiovascular diseases
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Endocrine and metabolic diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
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Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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912 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000006525
ENSG00000185499
Tissue enhanced
Detected in many
ductus deferens:
54.4
gallbladder:
54.0
kidney:
50.9
stomach:
70.9
na
ENSSSCG00000006665
ENSG00000143368
Low tissue specificity
Detected in all
na
ENSSSCG00000007527
ENSG00000124205
Endothelin-3
Tissue enhanced
Detected in all
cornea:
48.1
na
ENSSSCG00000007789
ENSG00000080603
Low tissue specificity
Detected in all
na
ENSSSCG00000008250
ENSG00000066032
Group enriched
Detected in many
brain:
27.9
lens:
85.1
pineal gland:
27.0
na
ENSSSCG00000009839
ENSG00000122966
Tissue enhanced
Detected in many
brain:
23.6
na
ENSSSCG00000010053
ENSG00000100014
Tissue enhanced
Detected in all
lens:
60.3
na
ENSSSCG00000011567
ENSG00000134086
Low tissue specificity
Detected in all
na
ENSSSCG00000011632
ENSG00000113971
Low tissue specificity
Detected in all
na
ENSSSCG00000011798
ENSG00000090520
DnaJ homolog subfamily B member 11 precursor
Low tissue specificity
Detected in all
na
ENSSSCG00000012125
ENSG00000046651
Low tissue specificity
Detected in all
na
ENSSSCG00000012241
ENSG00000183337
Low tissue specificity
Detected in all
na
ENSSSCG00000012382
ENSG00000089289,ENSG00000266826
Tissue enhanced
Detected in all
lens:
47.9
na
ENSSSCG00000013900
ENSG00000105647
Low tissue specificity
Detected in all
na
ENSSSCG00000013928
ENSG00000130283,ENSG00000223802
Tissue enhanced
Detected in many
brain:
43.4
vagus nerve:
18.8
na
ENSSSCG00000014161
ENSG00000185261
Tissue enhanced
Detected in all
fallopian tube:
32.3
na
ENSSSCG00000014165
ENSG00000198677
Low tissue specificity
Detected in all
na
ENSSSCG00000014895
ENSG00000218336
Tissue enhanced
Detected in many
adipose tissue:
46.8
skin:
47.3
na
ENSSSCG00000014949
ENSG00000042429,ENSG00000284057
Low tissue specificity
Detected in all
na
ENSSSCG00000014993
ENSG00000187240
Tissue enhanced
Detected in many
testis:
27.7
na
ENSSSCG00000016245
ENSG00000169031
Group enriched
Detected in some
cornea:
40.8
lens:
74.9
na
ENSSSCG00000016393
ENSG00000136698,ENSG00000152093
Tissue enhanced
Detected in some
brain:
7.6
lymphoid tissue:
4.0
pineal gland:
4.6
testis:
3.5
na
ENSSSCG00000020725
ENSG00000065361
Tissue enhanced
Detected in many
liver:
49.6
vagus nerve:
57.8
na
ENSSSCG00000023322
ENSG00000049089
Tissue enriched
Detected in many
cartilage:
148.3
na
ENSSSCG00000023611
ENSG00000168477
Tenascin-X precursor
Tissue enhanced
Detected in many
cartilage:
84.7
synovial tissue:
96.3
na
ENSSSCG00000024419
ENSG00000101773
Low tissue specificity
Detected in all
na
ENSSSCG00000024500
ENSG00000160226
Low tissue specificity
Detected in all
na
ENSSSCG00000026167
ENSG00000100934
Low tissue specificity
Detected in all
na
ENSSSCG00000026520
ENSG00000101846
Tissue enhanced
Detected in some
brain:
9.8
choroid plexus:
14.3
kidney:
27.7
na
ENSSSCG00000027098
ENSG00000162065,ENSG00000260272
Low tissue specificity
Detected in all
na
ENSSSCG00000027571
ENSG00000169379
Low tissue specificity
Detected in all
na
ENSSSCG00000028117
ENSG00000136861
Low tissue specificity
Detected in all
na
ENSSSCG00000028871
ENSG00000121552
Cystatin-A8
Tissue enhanced
Detected in all
bone marrow:
21.2
dura mater:
22.7
stomach:
30.6
na
ENSSSCG00000029393
ENSG00000151849
Tissue enriched
Detected in all
testis:
48.4
na
ENSSSCG00000029449
ENSG00000116690
Tissue enriched
Detected in some
cartilage:
708.5
na
ENSSSCG00000031086
ENSG00000104826
Lutropin subunit beta
Tissue enriched
Detected in some
pituitary gland:
196.2
na
ENSSSCG00000031933
ENSG00000185960
Tissue enhanced
Detected in some
brain:
6.4
cornea:
19.2
penis:
21.9
na
ENSSSCG00000032918
ENSG00000213123
Low tissue specificity
Detected in all
na
ENSSSCG00000032959
ENSG00000196976
Low tissue specificity
Detected in all
na
ENSSSCG00000033299
ENSG00000196924
Tissue enhanced
Detected in many
smooth muscle:
320.4
na
ENSSSCG00000033823
ENSG00000196236
Low tissue specificity
Detected in all
na
ENSSSCG00000033954
ENSG00000184056
Low tissue specificity
Detected in all
na
ENSSSCG00000034685
ENSG00000168028
Tissue enhanced
Detected in many
heart:
5.3
na
ENSSSCG00000034844
ENSG00000284770,ENSG00000285053
Low tissue specificity
Detected in all
na
ENSSSCG00000035293
ENSG00000167244
Insulin-like growth factor II Insulin-like growth factor II Preptin
Tissue enhanced
Detected in many
aorta:
166.6
mesothelial tissue:
215.3
na
ENSSSCG00000035497
ENSG00000122550
Low tissue specificity
Detected in all
na
ENSSSCG00000036741
ENSG00000069011
Pituitary homeobox 1
Tissue enhanced
Detected in many
cartilage:
30.2
male glands:
87.0
mouth:
33.4
salivary gland:
41.5
stomach:
37.4
na
ENSSSCG00000037145
ENSG00000171862
Tissue enriched
Detected in single
testis:
15.9
na
ENSSSCG00000038202
ENSG00000160299
Low tissue specificity
Detected in all
na
ENSSSCG00000039002
ENSG00000029993
Low tissue specificity
Detected in all
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