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Gene name
Human disease related genes
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Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
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Cancers
Cardiovascular diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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912 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000039037
ENSG00000165588
Tissue enhanced
Detected in many
testis:
10.3
na
ENSSSCG00000039139
ENSG00000142208
RAC-alpha serine/threonine-protein kinase
Low tissue specificity
Detected in all
na
ENSSSCG00000039364
ENSG00000183098
Tissue enriched
Detected in many
cartilage:
185.3
na
ENSSSCG00000040438
ENSG00000131174
Low tissue specificity
Detected in all
na
ENSSSCG00000040461
ENSG00000129757
Low tissue specificity
Detected in many
na
ENSSSCG00000040554
ENSG00000092758
Tissue enriched
Detected in some
cartilage:
366.1
na
ENSSSCG00000040857
ENSG00000125835
Low tissue specificity
Detected in all
na
ENSSSCG00000040958
ENSG00000213281
Low tissue specificity
Detected in all
NAA10
ENSSSCG00000012791
ENSG00000102030
N(alpha)-acetyltransferase 10, NatA catalytic subunit
Low tissue specificity
Detected in all
NALCN
ENSSSCG00000038949
ENSG00000102452
Sodium leak channel, non-selective
Tissue enhanced
Detected in many
brain:
15.2
pineal gland:
14.9
NANS
ENSSSCG00000005373
ENSG00000095380
Sialic acid synthase
Low tissue specificity
Detected in all
NCAPD2
ENSSSCG00000000693
ENSG00000010292
Non-SMC condensin I complex subunit D2
Low tissue specificity
Detected in all
NCAPD3
ENSSSCG00000022192
ENSG00000151503
Non-SMC condensin II complex subunit D3
Low tissue specificity
Detected in all
NCAPH
ENSSSCG00000008125
ENSG00000121152
Non-SMC condensin I complex subunit H
Low tissue specificity
Detected in all
NDE1
ENSSSCG00000040479
ENSG00000072864
NudE neurodevelopment protein 1
Low tissue specificity
Detected in all
NDP
ENSSSCG00000029656
ENSG00000124479
Norrin precursor
Tissue enhanced
Detected in many
brain:
31.8
pineal gland:
14.7
NDUFB11
ENSSSCG00000034487
ENSG00000147123
NADH:ubiquinone oxidoreductase subunit B11
Low tissue specificity
Detected in all
NECTIN1
ENSSSCG00000015125
ENSG00000110400
Nectin-1 precursor
Tissue enhanced
Detected in many
skin:
34.6
urinary bladder:
38.1
NECTIN4
ENSSSCG00000026861
ENSG00000143217
Nectin cell adhesion molecule 4
Tissue enhanced
Detected in many
cornea:
28.9
male glands:
19.1
mouth:
24.0
skin:
19.1
urinary bladder:
17.6
NEDD4L
ENSSSCG00000004919
ENSG00000049759
Neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
Low tissue specificity
Detected in all
NEK1
ENSSSCG00000009714
ENSG00000137601
NIMA related kinase 1
Tissue enhanced
Detected in all
lens:
79.8
NEK8
ENSSSCG00000017766
ENSG00000160602
NIMA related kinase 8
Low tissue specificity
Detected in all
NEK9
ENSSSCG00000002381
ENSG00000119638
NIMA related kinase 9
Low tissue specificity
Detected in all
NF1
ENSSSCG00000017748
ENSG00000196712
Neurofibromin 1
Low tissue specificity
Detected in all
NF2
ENSSSCG00000028707
ENSG00000186575
Neurofibromin 2
Low tissue specificity
Detected in all
NFIX
ENSSSCG00000013742
ENSG00000008441
Nuclear factor I X
Low tissue specificity
Detected in all
NHS
ENSSSCG00000012151
ENSG00000188158
NHS actin remodeling regulator
Tissue enhanced
Detected in all
lens:
30.7
NIN
ENSSSCG00000005022
ENSG00000100503
Ninein
Low tissue specificity
Detected in all
NIPAL4
ENSSSCG00000017053
ENSG00000172548
NIPA like domain containing 4
Tissue enhanced
Detected in many
brain:
16.9
skin:
29.1
NIPBL
ENSSSCG00000016842
ENSG00000164190
NIPBL, cohesin loading factor
Low tissue specificity
Detected in all
NKX2-5
ENSSSCG00000036285
ENSG00000183072
NK2 homeobox 5
Tissue enriched
Detected in some
heart:
34.6
NKX3-2
ENSSSCG00000034181
ENSG00000109705
NK3 homeobox 2
Tissue enhanced
Detected in many
cartilage:
34.0
smooth muscle:
20.8
NODAL
ENSSSCG00000039399
ENSG00000156574
Nodal growth differentiation factor
Tissue enhanced
Detected in many
cartilage:
7.2
NOG
ENSSSCG00000036437
ENSG00000183691
Noggin precursor
Tissue enhanced
Detected in many
brain:
23.0
NOTCH1
ENSSSCG00000038509
ENSG00000148400
Notch 1
Low tissue specificity
Detected in all
NOTCH2
ENSSSCG00000006709
ENSG00000134250
Notch 2
Low tissue specificity
Detected in all
NOTCH3
ENSSSCG00000025176
ENSG00000074181
Notch 3
Low tissue specificity
Detected in all
NPHP1
ENSSSCG00000008111
ENSG00000144061
Nephrocystin 1
Tissue enhanced
Detected in all
testis:
55.1
NPHP4
ENSSSCG00000029843
ENSG00000131697
Nephrocystin 4
Low tissue specificity
Detected in all
NPR2
ENSSSCG00000005322
ENSG00000159899
Atrial natriuretic peptide receptor 2 precursor
Low tissue specificity
Detected in all
NR2F2
ENSSSCG00000002254
ENSG00000185551
COUP transcription factor 2 isoform 2
Low tissue specificity
Detected in all
NRIP1
ENSSSCG00000021038
ENSG00000180530
Nuclear receptor interacting protein 1
Tissue enhanced
Detected in all
cervix:
95.1
NRXN1
ENSSSCG00000008419
ENSG00000179915
Neurexin 1
Tissue enhanced
Detected in many
bone marrow:
25.5
brain:
62.7
pituitary gland:
24.4
NSD1
ENSSSCG00000014044
ENSG00000165671
Nuclear receptor binding SET domain protein 1
Low tissue specificity
Detected in all
NSDHL
ENSSSCG00000012758
ENSG00000147383
Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating
Tissue enhanced
Detected in all
testis:
52.1
NSMCE2
ENSSSCG00000037755
ENSG00000156831
NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase
Low tissue specificity
Detected in all
NUP107
ENSSSCG00000000486
ENSG00000111581
Nucleoporin 107
Low tissue specificity
Detected in all
NUP133
ENSSSCG00000010189
ENSG00000069248
Nucleoporin 133
Low tissue specificity
Detected in all
NUP37
ENSSSCG00000000860
ENSG00000075188
Nucleoporin 37
Low tissue specificity
Detected in all
OBSL1
ENSSSCG00000028052
ENSG00000124006
Obscurin like 1
Low tissue specificity
Detected in all
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