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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Other congenital disorders
Other diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
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1175 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
HOXB1
ENSSSCG00000017532
ENSG00000120094
Homeobox B1
Tissue enriched
Detected in single
epididymis:
4.7
HRASLS5
ENSSSCG00000021482
ENSG00000168004
HRAS like suppressor family member 5
Tissue enriched
Detected in many
testis:
64.4
HSD17B3
ENSSSCG00000010937
ENSG00000130948
Testosterone 17-beta-dehydrogenase 3
Tissue enriched
Detected in some
testis:
32.9
HSF5
ENSSSCG00000017641
ENSG00000176160
Heat shock transcription factor 5
Tissue enriched
Detected in some
testis:
101.9
HSPA1L
ENSSSCG00000030368
ENSG00000204390
Heat shock 70 kDa protein 1-like
Tissue enriched
Detected in many
testis:
71.8
HSPA4L
ENSSSCG00000009077
ENSG00000164070
Heat shock protein family A (Hsp70) member 4 like
Tissue enriched
Detected in all
testis:
101.7
HSPB9
ENSSSCG00000017413
ENSG00000260325
Heat shock protein family B (small) member 9
Tissue enriched
Detected in single
testis:
169.4
HTR3B
ENSSSCG00000015053
ENSG00000149305
5-hydroxytryptamine receptor 3B
Tissue enriched
Detected in some
testis:
52.3
IL1B2
ENSSSCG00000008087
Interleukin 1, beta
Tissue enriched
Detected in single
testis:
1.7
IL4I1
ENSSSCG00000003192
ENSG00000104951
Interleukin 4 induced 1
Tissue enriched
Detected in many
testis:
91.7
INSL3
ENSSSCG00000013887
ENSG00000248099
Insulin-like 3 Insulin-like 3 B chain Insulin-like 3 A chain
Tissue enriched
Detected in some
testis:
468.6
INSL6
ENSSSCG00000005214
ENSG00000120210
Insulin like 6
Tissue enriched
Detected in some
testis:
58.1
IQCA1L
ENSSSCG00000025737
ENSG00000278685
IQ motif containing with AAA domain 1 like
Tissue enriched
Detected in some
testis:
19.0
IQCF1
ENSSSCG00000029827
ENSG00000173389
IQ motif containing F1
Tissue enriched
Detected in many
testis:
75.6
IQCF2
ENSSSCG00000023824
ENSG00000184345
IQ motif containing F2
Tissue enriched
Detected in some
testis:
57.9
IRGC
ENSSSCG00000003066
ENSG00000124449
Interferon-inducible GTPase 5
Tissue enriched
Detected in some
testis:
130.9
ISG20L2
ENSSSCG00000006471
ENSG00000143319
Interferon stimulated exonuclease gene 20 like 2
Tissue enriched
Detected in all
testis:
88.7
ITM2B
ENSSSCG00000009403
ENSG00000136156
Integral membrane protein 2B
Tissue enriched
Detected in all
epididymis:
329.8
IZUMO3
ENSSSCG00000005129
ENSG00000205442
IZUMO family member 3
Tissue enriched
Detected in single
testis:
37.5
IZUMO4
ENSSSCG00000013455
ENSG00000099840
IZUMO family member 4
Tissue enriched
Detected in many
testis:
165.6
KCTD19
ENSSSCG00000002781
ENSG00000168676
Potassium channel tetramerization domain containing 19
Tissue enriched
Detected in single
testis:
72.2
KIAA1211
ENSSSCG00000008903
ENSG00000109265
KIAA1211
Tissue enriched
Detected in many
epididymis:
89.8
KIF17
ENSSSCG00000003508
ENSG00000117245
Kinesin family member 17
Tissue enriched
Detected in some
testis:
88.9
KIF25
ENSSSCG00000004016
ENSG00000125337
Kinesin family member 25
Tissue enriched
Detected in many
testis:
40.1
KIF2B
ENSSSCG00000017599
ENSG00000141200
Kinesin family member 2B
Tissue enriched
Detected in single
testis:
58.7
KIF2C
ENSSSCG00000003931
ENSG00000142945
Kinesin family member 2C
Tissue enriched
Detected in many
testis:
45.6
KLHL10
ENSSSCG00000033629
ENSG00000161594
Kelch like family member 10
Tissue enriched
Detected in single
testis:
75.7
KPNA2
ENSSSCG00000029005
ENSG00000182481
Importin subunit alpha-1
Tissue enriched
Detected in many
testis:
108.3
LCA5L
ENSSSCG00000028122
ENSG00000157578
LCA5L, lebercilin like
Tissue enriched
Detected in many
testis:
49.8
LCN10
ENSSSCG00000005836
ENSG00000187922
Lipocalin 10
Tissue enriched
Detected in some
epididymis:
55.4
LCN8
ENSSSCG00000021963
ENSG00000204001
Lipocalin 8
Tissue enriched
Detected in some
epididymis:
42.6
LDHC
ENSSSCG00000013363
ENSG00000166796
L-lactate dehydrogenase C chain
Tissue enriched
Detected in some
testis:
76.1
LHFPL1
ENSSSCG00000012590
ENSG00000182508
LHFPL tetraspan subfamily member 1
Tissue enriched
Detected in some
male glands:
32.8
LKAAEAR1
ENSSSCG00000033548
ENSG00000171695
LKAAEAR motif containing 1
Tissue enriched
Detected in some
testis:
38.8
LRRC26
ENSSSCG00000032509
ENSG00000184709
Leucine rich repeat containing 26
Tissue enriched
Detected in many
male glands:
160.2
LRRC51
ENSSSCG00000014803
ENSG00000284922
Leucine-rich repeat-containing protein 51
Tissue enriched
Detected in many
testis:
72.5
LRRC72
ENSSSCG00000015361
ENSG00000205858
Leucine rich repeat containing 72
Tissue enriched
Detected in many
testis:
43.7
LRRC74A
ENSSSCG00000002391
ENSG00000100565
Leucine rich repeat containing 74A
Tissue enriched
Detected in single
testis:
18.5
LRRIQ4
ENSSSCG00000023679
ENSG00000188306
Leucine rich repeats and IQ motif containing 4
Tissue enriched
Detected in some
testis:
19.2
LYAR
ENSSSCG00000008729
ENSG00000145220
Ly1 antibody reactive
Tissue enriched
Detected in all
testis:
65.7
LYPD4
ENSSSCG00000003044
ENSG00000273111
Ly6/PLAUR domain-containing protein 4 precursor
Tissue enriched
Detected in some
testis:
84.3
LYZL4
ENSSSCG00000011279
ENSG00000157093
Lysozyme like 4
Tissue enriched
Detected in single
testis:
46.3
LYZL6
ENSSSCG00000017321
ENSG00000275722
Lysozyme like 6
Tissue enriched
Detected in single
testis:
48.5
MAEL
ENSSSCG00000006316
ENSG00000143194
Protein maelstrom homolog
Tissue enriched
Detected in some
testis:
56.6
MAGEB10
ENSSSCG00000012193
ENSG00000177689
MAGE family member B10
Tissue enriched
Detected in single
testis:
13.8
MAGEB3
ENSSSCG00000012198
ENSG00000198798
MAGE family member B3
Tissue enriched
Detected in some
testis:
10.7
MAJIN
ENSSSCG00000040674
ENSG00000168070
Membrane anchored junction protein
Tissue enriched
Detected in some
testis:
30.2
MAN2B2
ENSSSCG00000027178
ENSG00000013288
Epididymis-specific alpha-mannosidase precursor
Tissue enriched
Detected in single
epididymis:
415.8
MARCH10
ENSSSCG00000017299
ENSG00000173838
Membrane associated ring-CH-type finger 10
Tissue enriched
Detected in many
testis:
52.9
MARCH11
ENSSSCG00000031525
ENSG00000183654
Membrane associated ring-CH-type finger 11
Tissue enriched
Detected in all
testis:
40.2
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