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Gene name
Human disease related genes
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Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Term
Gene name
Class
Cancers
Cardiovascular diseases
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Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
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Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
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THE PROJECT
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RELEASE HISTORY
1175 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
MAT2A
ENSSSCG00000022300
ENSG00000168906
S-adenosylmethionine synthase
Tissue enriched
Detected in all
epididymis:
268.1
MEIG1
ENSSSCG00000034119
ENSG00000197889
Meiosis/spermiogenesis associated 1
Tissue enriched
Detected in many
testis:
49.3
MEIOC
ENSSSCG00000017351
ENSG00000180336
Meiosis specific with coiled-coil domain
Tissue enriched
Detected in single
testis:
59.6
MEX3D
ENSSSCG00000021750
ENSG00000181588
Mex-3 RNA binding family member D
Tissue enriched
Detected in all
testis:
69.4
MGAT4C
ENSSSCG00000032321
ENSG00000182050
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C
Tissue enriched
Detected in some
epididymis:
102.3
MGAT4D
ENSSSCG00000038236
ENSG00000205301
MGAT4 family member D
Tissue enriched
Detected in some
testis:
37.8
MMEL1
ENSSSCG00000003356
ENSG00000142606
Membrane metalloendopeptidase like 1
Tissue enriched
Detected in some
testis:
31.2
MOV10L1
ENSSSCG00000000976
ENSG00000073146
Mov10 RISC complex RNA helicase like 1
Tissue enriched
Detected in some
testis:
46.7
MPC1L
ENSSSCG00000012248
ENSG00000238205
Mitochondrial pyruvate carrier 1 like
Tissue enriched
Detected in single
testis:
35.4
MRGBP
ENSSSCG00000035353
ENSG00000101189
MRG domain binding protein
Tissue enriched
Detected in all
testis:
69.8
MROH2A
ENSSSCG00000016305
ENSG00000185038
Maestro heat like repeat family member 2A
Tissue enriched
Detected in single
testis:
24.0
MROH2B
ENSSSCG00000021645
ENSG00000171495
Maestro heat like repeat family member 2B
Tissue enriched
Detected in single
testis:
64.1
MROH9
ENSSSCG00000026160
ENSG00000117501
Maestro heat like repeat family member 9
Tissue enriched
Detected in single
testis:
11.3
MS4A5
ENSSSCG00000026796
ENSG00000166930
Membrane spanning 4-domains A5
Tissue enriched
Detected in some
testis:
67.4
MSMB
ENSSSCG00000010400
ENSG00000263639
Beta-microseminoprotein precursor
Tissue enriched
Detected in some
male glands:
2458.8
MTHFR
ENSSSCG00000003428
ENSG00000177000
Methylenetetrahydrofolate reductase
Tissue enriched
Detected in all
epididymis:
94.0
MUC15
ENSSSCG00000013340
ENSG00000169550
Mucin 15, cell surface associated
Tissue enriched
Detected in some
epididymis:
114.0
MYBPHL
ENSSSCG00000006834
ENSG00000221986
Myosin binding protein H like
Tissue enriched
Detected in all
epididymis:
41.7
MYCBPAP
ENSSSCG00000017563
ENSG00000136449
MYCBP associated protein
Tissue enriched
Detected in many
testis:
56.2
MYH3
ENSSSCG00000018007
ENSG00000109063
Myosin heavy chain 3
Tissue enriched
Detected in many
male glands:
85.8
na
ENSSSCG00000000312
Tissue enriched
Detected in single
testis:
9.9
na
ENSSSCG00000000782
ENSG00000180116
Tissue enriched
Detected in some
testis:
22.3
na
ENSSSCG00000001001
ENSG00000185689
Tissue enriched
Detected in some
testis:
39.7
na
ENSSSCG00000001083
ENSG00000112273
Tissue enriched
Detected in many
testis:
67.0
na
ENSSSCG00000001105
Tissue enriched
Detected in some
testis:
63.2
na
ENSSSCG00000001232
Tissue enriched
Detected in some
testis:
52.9
na
ENSSSCG00000001431
ENSG00000204315
FK506-binding protein-like
Tissue enriched
Detected in many
testis:
43.3
na
ENSSSCG00000001444
ENSG00000204296
Tissue enriched
Detected in single
testis:
58.6
na
ENSSSCG00000001574
Tissue enriched
Detected in single
testis:
21.3
na
ENSSSCG00000001633
ENSG00000214732
Tissue enriched
Detected in some
testis:
140.1
na
ENSSSCG00000001655
ENSG00000124733
Male-enhanced antigen 1
Tissue enriched
Detected in all
testis:
230.8
na
ENSSSCG00000001855
Tissue enriched
Detected in some
testis:
16.2
na
ENSSSCG00000001926
ENSG00000187806
Tissue enriched
Detected in some
testis:
58.6
na
ENSSSCG00000002251
Tissue enriched
Detected in single
testis:
41.9
na
ENSSSCG00000002261
Tissue enriched
Detected in single
testis:
13.5
na
ENSSSCG00000002270
Tissue enriched
Detected in single
testis:
41.7
na
ENSSSCG00000002284
ENSG00000196553
Tissue enriched
Detected in some
testis:
58.9
na
ENSSSCG00000002321
Tissue enriched
Detected in some
testis:
19.3
na
ENSSSCG00000002326
Tissue enriched
Detected in single
testis:
48.9
na
ENSSSCG00000002536
Tissue enriched
Detected in some
testis:
86.0
na
ENSSSCG00000002903
Tissue enriched
Detected in many
testis:
73.3
na
ENSSSCG00000002944
Tissue enriched
Detected in single
testis:
35.0
na
ENSSSCG00000002980
Tissue enriched
Detected in some
male glands:
2217.0
na
ENSSSCG00000003043
Tissue enriched
Detected in some
testis:
43.2
na
ENSSSCG00000003052
ENSG00000131126
Tissue enriched
Detected in many
testis:
72.6
na
ENSSSCG00000003234
Tissue enriched
Detected in some
testis:
90.0
na
ENSSSCG00000003243
ENSG00000256087
Tissue enriched
Detected in many
testis:
55.2
na
ENSSSCG00000003448
Tissue enriched
Detected in some
epididymis:
5.8
na
ENSSSCG00000003476
ENSG00000187144
Tissue enriched
Detected in some
testis:
41.5
na
ENSSSCG00000003623
ENSG00000142698
Tissue enriched
Detected in some
testis:
69.5
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