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Human disease related genes
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Keyword
Chromosome
1
2
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7
8
9
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
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Stomach 1
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Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
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Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
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TECHNICAL DATA
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RELEASE HISTORY
1175 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
PAGE2B
ENSSSCG00000012346
ENSG00000238269
Putative G antigen family E member 3
Tissue enriched
Detected in some
testis:
58.4
PATE1
ENSSSCG00000040952
ENSG00000171053
Prostate and testis expressed 1
Tissue enriched
Detected in single
epididymis:
99.3
PATE2
ENSSSCG00000038721
ENSG00000196844
Prostate and testis expressed 2
Tissue enriched
Detected in some
epididymis:
64.2
PATE3
ENSSSCG00000015221
ENSG00000236027
Prostate and testis expressed 3
Tissue enriched
Detected in some
epididymis:
75.4
PCDHB1
ENSSSCG00000014377
ENSG00000171815
Protocadherin beta 1
Tissue enriched
Detected in some
testis:
21.1
PCSK4
ENSSSCG00000024379
ENSG00000115257
Proprotein convertase subtilisin/kexin type 4
Tissue enriched
Detected in some
testis:
77.8
PDCL2
ENSSSCG00000008908
ENSG00000163440
Phosducin like 2
Tissue enriched
Detected in some
testis:
56.9
PDHA2
ENSSSCG00000035705
ENSG00000163114
Pyruvate dehydrogenase E1 alpha 2 subunit
Tissue enriched
Detected in single
testis:
9.4
PDILT
ENSSSCG00000007860
ENSG00000169340
Protein disulfide isomerase like, testis expressed
Tissue enriched
Detected in many
testis:
58.5
PDZD9
ENSSSCG00000026686
ENSG00000155714
PDZ domain containing 9
Tissue enriched
Detected in all
testis:
91.7
PEMT
ENSSSCG00000018055
ENSG00000133027
Phosphatidylethanolamine N-methyltransferase
Tissue enriched
Detected in all
epididymis:
180.8
PFN4
ENSSSCG00000008585
ENSG00000176732
Profilin family member 4
Tissue enriched
Detected in some
testis:
50.6
PGK2
ENSSSCG00000001738
ENSG00000170950
Phosphoglycerate kinase 2
Tissue enriched
Detected in single
testis:
78.4
PHF7
ENSSSCG00000011439
ENSG00000010318
PHD finger protein 7
Tissue enriched
Detected in some
testis:
161.2
PHKG2
ENSSSCG00000007788
ENSG00000156873
Phosphorylase b kinase gamma catalytic chain, liver/testis isoform
Tissue enriched
Detected in all
testis:
113.5
PIWIL1
ENSSSCG00000009749
ENSG00000125207
Piwi-like protein 1
Tissue enriched
Detected in single
testis:
70.7
PKD2L1
ENSSSCG00000010552
ENSG00000107593
Polycystin 2 like 1, transient receptor potential cation channel
Tissue enriched
Detected in single
testis:
9.4
PKD2L2
ENSSSCG00000026421
ENSG00000078795
Polycystin 2 like 2, transient receptor potential cation channel
Tissue enriched
Detected in some
testis:
92.6
PKDREJ
ENSSSCG00000035583
ENSG00000130943
Polycystin family receptor for egg jelly
Tissue enriched
Detected in single
testis:
115.5
PKMYT1
ENSSSCG00000029264
ENSG00000127564
Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase
Tissue enriched
Detected in all
testis:
41.6
PLA2G2A
ENSSSCG00000003494
ENSG00000188257
Phospholipase A2 group IIA
Tissue enriched
Detected in single
testis:
22.5
PLAC1
ENSSSCG00000031207
ENSG00000170965
Placenta specific 1
Tissue enriched
Detected in some
testis:
34.1
PLAC8L1
ENSSSCG00000014408
ENSG00000173261
PLAC8 like 1
Tissue enriched
Detected in many
testis:
40.3
PLCZ1
ENSSSCG00000000590
ENSG00000139151
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase zeta-1
Tissue enriched
Detected in some
testis:
54.3
PLD6
ENSSSCG00000039878
ENSG00000179598
Phospholipase D family member 6
Tissue enriched
Detected in some
testis:
51.8
PNLDC1
ENSSSCG00000004046
ENSG00000146453
PARN like, ribonuclease domain containing 1
Tissue enriched
Detected in some
testis:
14.0
PNLIP
ENSSSCG00000010658
ENSG00000175535
Pancreatic triacylglycerol lipase precursor
Tissue enriched
Detected in some
testis:
11.0
PP2D1
ENSSSCG00000027327
ENSG00000183977
Protein phosphatase 2C like domain containing 1
Tissue enriched
Detected in all
testis:
46.1
PPP4R3C
ENSSSCG00000012191
ENSG00000224960
Protein phosphatase 4 regulatory subunit 3C
Tissue enriched
Detected in some
testis:
25.3
PRAME
ENSSSCG00000036408
ENSG00000185686
Preferentially expressed antigen in melanoma
Tissue enriched
Detected in some
testis:
6.6
PRDM14
ENSSSCG00000006195
ENSG00000147596
PR/SET domain 14
Tissue enriched
Detected in single
testis:
16.1
PRM1
ENSSSCG00000021337
Sperm protamine P1
Tissue enriched
Detected in some
testis:
1334.7
PRM2
ENSSSCG00000024307
Protamine-2 precursor
Tissue enriched
Detected in some
testis:
368.9
PRM3
ENSSSCG00000035607
ENSG00000178257
Protamine 3
Tissue enriched
Detected in some
testis:
187.8
PRND
ENSSSCG00000032923
ENSG00000171864
Prion like protein doppel
Tissue enriched
Detected in some
testis:
38.7
PROCA1
ENSSSCG00000017770
ENSG00000167525
Protein interacting with cyclin A1
Tissue enriched
Detected in some
testis:
77.5
PROKR1
ENSSSCG00000038148
ENSG00000169618
Prokineticin receptor 1
Tissue enriched
Detected in some
epididymis:
37.2
PRPS2
ENSSSCG00000012116
ENSG00000101911
Ribose-phosphate pyrophosphokinase 2
Tissue enriched
Detected in all
male glands:
139.6
PRR15
ENSSSCG00000016686
ENSG00000176532
Proline rich 15
Tissue enriched
Detected in many
male glands:
87.3
PRR30
ENSSSCG00000008552
ENSG00000186143
Proline rich 30
Tissue enriched
Detected in single
testis:
106.3
PRSS22
ENSSSCG00000035594
ENSG00000005001
Serine protease 22
Tissue enriched
Detected in all
male glands:
44.5
PRSS37
ENSSSCG00000029612
ENSG00000165076
Serine protease 37
Tissue enriched
Detected in single
testis:
138.3
PRSS54
ENSSSCG00000028587
ENSG00000103023
Serine protease 54
Tissue enriched
Detected in some
testis:
48.9
PRSS58
ENSSSCG00000016485
ENSG00000258223
Serine protease 58
Tissue enriched
Detected in single
testis:
78.9
PSMA8
ENSSSCG00000003717
ENSG00000154611
Proteasome subunit alpha 8
Tissue enriched
Detected in single
testis:
37.6
PSP-II
ENSSSCG00000002978
Major seminal plasma glycoprotein PSP-II precursor
Tissue enriched
Detected in some
male glands:
3633.2
QRICH2
ENSSSCG00000021342
ENSG00000129646
Glutamine rich 2
Tissue enriched
Detected in some
testis:
29.7
RAD51AP2
ENSSSCG00000038058
ENSG00000214842
RAD51 associated protein 2
Tissue enriched
Detected in some
testis:
18.2
RDH12
ENSSSCG00000002297
ENSG00000139988
Retinol dehydrogenase 12 precursor
Tissue enriched
Detected in some
testis:
191.0
REXO5
ENSSSCG00000007855
ENSG00000005189
RNA exonuclease 5
Tissue enriched
Detected in all
testis:
117.1
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