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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
Class
Cancers
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
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THE PROJECT
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RELEASE HISTORY
1175 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000040744
Tissue enriched
Detected in single
testis:
25.5
na
ENSSSCG00000040795
Tissue enriched
Detected in some
testis:
16.5
na
ENSSSCG00000040799
Tissue enriched
Detected in some
testis:
7.8
na
ENSSSCG00000040800
Tissue enriched
Detected in some
testis:
14.5
na
ENSSSCG00000040821
Tissue enriched
Detected in single
testis:
8.0
na
ENSSSCG00000040858
Tissue enriched
Detected in some
testis:
76.4
na
ENSSSCG00000040862
Tissue enriched
Detected in some
testis:
14.8
na
ENSSSCG00000040865
Tissue enriched
Detected in some
male glands:
5.5
na
ENSSSCG00000040877
Tissue enriched
Detected in single
testis:
3.8
na
ENSSSCG00000040894
ENSG00000184276
Tissue enriched
Detected in single
epididymis:
21.9
na
ENSSSCG00000040927
Tissue enriched
Detected in single
testis:
6.6
na
ENSSSCG00000040932
Tissue enriched
Detected in some
epididymis:
14.4
na
ENSSSCG00000040950
Tissue enriched
Detected in some
testis:
15.0
na
ENSSSCG00000040963
Tissue enriched
Detected in single
testis:
6.5
na
ENSSSCG00000040975
Tissue enriched
Detected in single
testis:
4.1
NAA11
ENSSSCG00000009258
ENSG00000156269
N(alpha)-acetyltransferase 11, NatA catalytic subunit
Tissue enriched
Detected in single
testis:
20.9
NCBP2L
ENSSSCG00000012562
ENSG00000170935
Nuclear cap binding protein subunit 2 like
Tissue enriched
Detected in single
testis:
32.9
NCOA4
ENSSSCG00000010399
ENSG00000266412
Nuclear receptor coactivator 4
Tissue enriched
Detected in all
male glands:
156.0
NEK2
ENSSSCG00000015604
ENSG00000117650
NIMA related kinase 2
Tissue enriched
Detected in many
testis:
54.1
NKAPL
ENSSSCG00000001205
ENSG00000189134
NFKB activating protein like
Tissue enriched
Detected in some
testis:
43.1
NKX3-1
ENSSSCG00000031924
ENSG00000167034
NK3 homeobox 1
Tissue enriched
Detected in some
male glands:
206.7
NME8
ENSSSCG00000015448
ENSG00000086288
NME/NM23 family member 8
Tissue enriched
Detected in some
testis:
51.9
NOX3
ENSSSCG00000004068
ENSG00000074771
NADPH oxidase 3
Tissue enriched
Detected in some
testis:
18.2
NPB
ENSSSCG00000035837
ENSG00000183979
Neuropeptide B
Tissue enriched
Detected in many
epididymis:
75.9
NPC2
ENSSSCG00000002366
ENSG00000119655
Epididymal secretory protein E1
Tissue enriched
Detected in many
epididymis:
615.2
NPPC
ENSSSCG00000026852
ENSG00000163273
C-type natriuretic peptide CNP-22 CNP-29 CNP-53
Tissue enriched
Detected in some
male glands:
300.0
NRM
ENSSSCG00000023639
ENSG00000137404
Nurim
Tissue enriched
Detected in many
testis:
74.2
NSUN4
ENSSSCG00000038280
ENSG00000117481
NOP2/Sun RNA methyltransferase family member 4
Tissue enriched
Detected in all
testis:
60.1
NUP210L
ENSSSCG00000038125
ENSG00000143552
Nucleoporin 210 like
Tissue enriched
Detected in some
testis:
50.6
NUPR2
ENSSSCG00000007741
ENSG00000185290
Nuclear protein 2, transcriptional regulator
Tissue enriched
Detected in some
testis:
79.8
NUTM1
ENSSSCG00000002241
ENSG00000184507
NUT midline carcinoma family member 1
Tissue enriched
Detected in some
testis:
25.2
OAZ3
ENSSSCG00000027091
ENSG00000143450
Sus scrofa ornithine decarboxylase antizyme 3 (OAZ3), transcript variant 2, mRNA.
Tissue enriched
Detected in some
testis:
243.9
ODF1
ENSSSCG00000006056
ENSG00000155087
Outer dense fiber protein 1
Tissue enriched
Detected in single
testis:
209.1
ODF2
ENSSSCG00000005651
ENSG00000136811
Outer dense fiber protein 2
Tissue enriched
Detected in all
testis:
133.6
ODF3
ENSSSCG00000014555
ENSG00000177947
Outer dense fiber of sperm tails 3
Tissue enriched
Detected in some
testis:
41.8
ODF3L1
ENSSSCG00000001879
ENSG00000182950
Outer dense fiber of sperm tails 3 like 1
Tissue enriched
Detected in some
testis:
27.7
ODF3L2
ENSSSCG00000032811
ENSG00000181781
Outer dense fiber of sperm tails 3 like 2
Tissue enriched
Detected in some
testis:
84.0
OLF42-1
ENSSSCG00000031213
Sus scrofa olfactory receptor-like protein 42-2 (OLF42-2), mRNA.
Tissue enriched
Detected in some
testis:
12.2
OR10C1
ENSSSCG00000033935
ENSG00000206474
Olfactory receptor family 10 subfamily C member 1 (gene/pseudogene)
Tissue enriched
Detected in some
testis:
11.9
OR10Q1
ENSSSCG00000037952
ENSG00000180475
Olfactory receptor family 10 subfamily Q member 1
Tissue enriched
Detected in single
testis:
4.3
OR14A16
ENSSSCG00000036754
ENSG00000196772
Olfactory receptor family 14 subfamily A member 16
Tissue enriched
Detected in single
testis:
8.0
OR2Z1
ENSSSCG00000013606
ENSG00000181733
Olfactory receptor family 2 subfamily Z member 1
Tissue enriched
Detected in single
testis:
5.3
OR4K5
ENSSSCG00000002594
ENSG00000176281
Olfactory receptor family 4 subfamily K member 5
Tissue enriched
Detected in some
testis:
5.2
OR5AP2
ENSSSCG00000036176
ENSG00000172464
Olfactory receptor family 5 subfamily AP member 2
Tissue enriched
Detected in single
testis:
4.0
OR8B12
ENSSSCG00000040102
ENSG00000170953
Olfactory receptor family 8 subfamily B member 12
Tissue enriched
Detected in single
testis:
9.9
OR8B4
ENSSSCG00000025064
ENSG00000280090
Olfactory receptor family 8 subfamily B member 4 (gene/pseudogene)
Tissue enriched
Detected in single
testis:
11.8
OR8B8
ENSSSCG00000031457
ENSG00000197125
Olfactory receptor family 8 subfamily B member 8
Tissue enriched
Detected in some
testis:
11.4
OTOGL
ENSSSCG00000000943
ENSG00000165899
Otogelin like
Tissue enriched
Detected in some
ductus deferens:
41.3
OTUB2
ENSSSCG00000002469
ENSG00000089723
OTU deubiquitinase, ubiquitin aldehyde binding 2
Tissue enriched
Detected in many
testis:
38.9
P14ARF
ENSSSCG00000005134
ENSG00000147889
P14ARF protein
Tissue enriched
Detected in many
testis:
66.5
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