We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
13372 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 268 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
E2F1
ENSSSCG00000007268
ENSG00000101412
E2F transcription factor 1
Tissue enhanced
Detected in many
lymphoid tissue:
25.7
E2F2
ENSSSCG00000032710
ENSG00000007968
E2F transcription factor 2
Tissue enhanced
Detected in many
large intestine:
16.2
lymphoid tissue:
38.3
stomach:
18.6
E2F5
ENSSSCG00000006145
ENSG00000133740
E2F transcription factor 5
Tissue enhanced
Detected in many
male glands:
28.1
E2F7
ENSSSCG00000000950
ENSG00000165891
E2F transcription factor 7
Tissue enhanced
Detected in many
brain:
13.0
lymphoid tissue:
16.4
upper respiratory system:
15.9
E2F8
ENSSSCG00000013352
ENSG00000129173
E2F transcription factor 8
Tissue enhanced
Detected in many
lymphoid tissue:
27.2
EAF2
ENSSSCG00000011880
ENSG00000145088
ELL associated factor 2
Tissue enhanced
Detected in many
lymphoid tissue:
40.8
small intestine:
24.3
upper respiratory system:
25.6
EBF1
ENSSSCG00000017046
ENSG00000164330
Early B cell factor 1
Tissue enhanced
Detected in many
adipose tissue:
65.3
bone marrow:
66.5
EBF2
ENSSSCG00000009655
ENSG00000221818
Early B cell factor 2
Tissue enhanced
Detected in many
adipose tissue:
22.9
vagus nerve:
35.3
EBF3
ENSSSCG00000010757
ENSG00000108001
Early B cell factor 3
Tissue enhanced
Detected in many
adipose tissue:
32.3
EBI3
ENSSSCG00000013498
ENSG00000105246
Interleukin-27 subunit beta precursor
Tissue enhanced
Detected in many
lymphoid tissue:
16.4
EBP
ENSSSCG00000032768
ENSG00000147155
3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
Tissue enhanced
Detected in all
liver:
53.4
ovary:
47.3
EBPL
ENSSSCG00000009393
ENSG00000123179
Emopamil binding protein like
Tissue enhanced
Detected in all
lens:
27.8
ECEL1
ENSSSCG00000016285
ENSG00000171551
Endothelin converting enzyme like 1
Tissue enriched
Detected in some
brain:
32.7
ECHDC1
ENSSSCG00000004216
ENSG00000093144
Ethylmalonyl-CoA decarboxylase 1
Tissue enhanced
Detected in all
liver:
44.8
skin:
40.8
ECHDC2
ENSSSCG00000003854
ENSG00000121310
Enoyl-CoA hydratase domain containing 2
Tissue enhanced
Detected in all
kidney:
81.4
liver:
79.8
ECHDC3
ENSSSCG00000011119
ENSG00000134463
Enoyl-CoA hydratase domain containing 3
Tissue enhanced
Detected in all
liver:
76.2
ECHS1
ENSSSCG00000038086
ENSG00000127884
Enoyl-CoA hydratase, mitochondrial
Tissue enhanced
Detected in all
liver:
73.1
ECI1
ENSSSCG00000034338
ENSG00000167969
Enoyl-CoA delta isomerase 1, mitochondrial
Tissue enhanced
Detected in all
liver:
96.2
ECI2
ENSSSCG00000001000
ENSG00000198721
Enoyl-CoA delta isomerase 2, mitochondrial
Tissue enhanced
Detected in all
liver:
61.0
ECM1
ENSSSCG00000029230
ENSG00000143369
Extracellular matrix protein 1
Tissue enhanced
Detected in many
mouth:
84.5
synovial tissue:
66.5
ECSIT
ENSSSCG00000013615
ENSG00000130159
ECSIT signalling integrator
Tissue enhanced
Detected in all
heart:
50.5
skeletal muscle:
54.1
ECT2
ENSSSCG00000035746
ENSG00000114346
Epithelial cell transforming 2
Tissue enhanced
Detected in all
lymphoid tissue:
23.4
testis:
23.6
ECT2L
ENSSSCG00000004147
ENSG00000203734
Epithelial cell transforming 2 like
Tissue enhanced
Detected in some
choroid plexus:
9.6
fallopian tube:
31.4
lung:
8.4
upper respiratory system:
18.1
EDA2R
ENSSSCG00000031779
ENSG00000131080
Ectodysplasin A2 receptor
Tissue enhanced
Detected in some
cervix:
1.4
mesothelial tissue:
1.0
EDDM3B
ENSSSCG00000021866
ENSG00000181552,ENSG00000181562
Epididymal secretory protein E3-beta precursor
Group enriched
Detected in many
ductus deferens:
54.5
epididymis:
177.7
male glands:
55.5
testis:
77.3
EDEM1
ENSSSCG00000034197
ENSG00000134109
ER degradation enhancing alpha-mannosidase like protein 1
Tissue enhanced
Detected in all
lymphoid tissue:
66.0
EDEM2
ENSSSCG00000007291
ENSG00000088298
ER degradation enhancing alpha-mannosidase like protein 2
Tissue enhanced
Detected in all
epididymis:
59.3
EDEM3
ENSSSCG00000015566
ENSG00000116406
ER degradation enhancing alpha-mannosidase like protein 3
Tissue enhanced
Detected in all
male glands:
85.7
salivary gland:
55.5
EDIL3
ENSSSCG00000026780
ENSG00000164176
EGF like repeats and discoidin domains 3
Group enriched
Detected in some
brain:
55.8
cartilage:
87.5
EDN2
ENSSSCG00000037856
ENSG00000127129
Endothelin 2
Tissue enhanced
Detected in some
mouth:
9.2
ovary:
22.8
stomach:
14.4
upper respiratory system:
15.7
EDNRA
ENSSSCG00000009031
ENSG00000151617
Endothelin-1 receptor precursor
Tissue enhanced
Detected in many
heart:
41.0
EDNRB
ENSSSCG00000009477
ENSG00000136160
Endothelin receptor type B
Tissue enhanced
Detected in many
adrenal gland:
64.1
choroid plexus:
64.7
cornea:
49.8
ovary:
62.6
EEF1A2
ENSSSCG00000040401
ENSG00000101210
Eukaryotic translation elongation factor 1 alpha 2
Tissue enhanced
Detected in many
brain:
76.6
heart:
176.3
skeletal muscle:
328.9
EEPD1
ENSSSCG00000039703
ENSG00000122547
Endonuclease/exonuclease/phosphatase family domain containing 1
Tissue enhanced
Detected in many
adipose tissue:
46.7
skeletal muscle:
33.4
EFCAB11
ENSSSCG00000002430
ENSG00000140025
EF-hand calcium binding domain 11
Tissue enhanced
Detected in all
testis:
43.6
EFCAB12
ENSSSCG00000011587
ENSG00000172771
EF-hand calcium-binding domain-containing protein 12
Tissue enhanced
Detected in some
choroid plexus:
28.6
fallopian tube:
28.4
lung:
15.9
upper respiratory system:
30.7
EFCAB13
ENSSSCG00000017305
ENSG00000178852
EF-hand calcium binding domain 13
Tissue enriched
Detected in single
testis:
22.7
EFCAB2
ENSSSCG00000010878
ENSG00000203666
EF-hand calcium binding domain 2
Tissue enhanced
Detected in all
testis:
30.8
EFCAB3
ENSSSCG00000017304
ENSG00000172421
EF-hand calcium binding domain 3
Tissue enriched
Detected in some
testis:
39.3
EFCAB5
ENSSSCG00000017794
ENSG00000176927
EF-hand calcium binding domain 5
Tissue enriched
Detected in many
testis:
33.5
EFCAB9
ENSSSCG00000016995
ENSG00000214360
EF-hand calcium binding domain 9
Tissue enriched
Detected in many
testis:
35.2
EFEMP1
ENSSSCG00000008397
ENSG00000115380
EGF-containing fibulin-like extracellular matrix protein 1 precursor
Tissue enhanced
Detected in all
cornea:
98.9
EFHB
ENSSSCG00000011205
ENSG00000163576
EF-hand domain family member B
Tissue enhanced
Detected in some
brain:
8.9
choroid plexus:
16.8
fallopian tube:
15.3
testis:
17.7
EFHC1
ENSSSCG00000002620
ENSG00000096093
EF-hand domain containing 1
Tissue enhanced
Detected in many
choroid plexus:
26.5
fallopian tube:
34.6
testis:
36.3
upper respiratory system:
37.3
EFHC2
ENSSSCG00000021846
ENSG00000183690
EF-hand domain containing 2
Tissue enhanced
Detected in many
choroid plexus:
14.0
fallopian tube:
14.2
pineal gland:
14.1
testis:
17.9
EFHD1
ENSSSCG00000016290
ENSG00000115468
EF-hand domain family member D1
Tissue enhanced
Detected in many
brain:
53.9
testis:
44.6
vagus nerve:
50.3
EFHD2
ENSSSCG00000003458
ENSG00000142634
EF-hand domain family member D2
Tissue enhanced
Detected in all
stomach:
162.8
EFNA2
ENSSSCG00000038701
ENSG00000099617
Ephrin A2
Tissue enriched
Detected in many
lymphoid tissue:
27.9
EFNA4
ENSSSCG00000036831
ENSG00000243364
Ephrin A4
Tissue enhanced
Detected in many
skin:
14.8
EFNB3
ENSSSCG00000017948
ENSG00000108947
Ephrin-B3 precursor
Tissue enhanced
Detected in some
brain:
23.3
pituitary gland:
7.9
« prev
| Page
of 268 |
next »