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Human disease related genes
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UMAP gene cluster
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Chromosome
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MT
Unmapped
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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15143 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
WDR18
ENSSSCG00000013423
ENSG00000065268
WD repeat domain 18
Low tissue specificity
Detected in all
WDR19
ENSSSCG00000008789
ENSG00000157796
WD repeat domain 19
Low tissue specificity
Detected in all
WDR20
ENSSSCG00000002533
ENSG00000140153
WD repeat domain 20
Low tissue specificity
Detected in all
WDR24
ENSSSCG00000008007
ENSG00000127580
WD repeat domain 24
Low tissue specificity
Detected in all
WDR25
ENSSSCG00000002517
ENSG00000176473
WD repeat domain 25
Low tissue specificity
Detected in all
WDR26
ENSSSCG00000010849
ENSG00000162923
WD repeat domain 26
Low tissue specificity
Detected in all
WDR27
ENSSSCG00000004008
ENSG00000184465
WD repeat domain 27
Tissue enhanced
Detected in all
epididymis:
36.0
WDR3
ENSSSCG00000006727
ENSG00000065183
WD repeat domain 3
Low tissue specificity
Detected in all
WDR31
ENSSSCG00000020987
ENSG00000148225
WD repeat domain 31
Low tissue specificity
Detected in all
WDR33
ENSSSCG00000015861
ENSG00000136709
WD repeat domain 33
Low tissue specificity
Detected in all
WDR34
ENSSSCG00000005655
ENSG00000119333
WD repeat domain 34
Low tissue specificity
Detected in all
WDR35
ENSSSCG00000008604
ENSG00000118965
WD repeat domain 35
Tissue enhanced
Detected in all
adrenal gland:
59.0
WDR36
ENSSSCG00000014199
ENSG00000134987
WD repeat domain 36
Low tissue specificity
Detected in all
WDR37
ENSSSCG00000029602
ENSG00000047056
WD repeat-containing protein 37
Low tissue specificity
Detected in all
WDR4
ENSSSCG00000023078
ENSG00000160193
WD repeat domain 4
Low tissue specificity
Detected in all
WDR41
ENSSSCG00000014098
ENSG00000164253
WD repeat domain 41
Low tissue specificity
Detected in all
WDR43
ENSSSCG00000008536
ENSG00000163811
WD repeat domain 43
Low tissue specificity
Detected in all
WDR44
ENSSSCG00000035488
ENSG00000131725
WD repeat domain 44
Low tissue specificity
Detected in all
WDR45
ENSSSCG00000012290
ENSG00000196998
WD repeat domain phosphoinositide-interacting protein 4
Low tissue specificity
Detected in all
WDR45B
ENSSSCG00000017133
ENSG00000141580
WD repeat domain phosphoinositide-interacting protein 3
Low tissue specificity
Detected in all
WDR46
ENSSSCG00000001504
ENSG00000227057
WD repeat domain 46
Low tissue specificity
Detected in all
WDR47
ENSSSCG00000006840
ENSG00000085433
WD repeat domain 47
Tissue enhanced
Detected in all
brain:
34.0
WDR48
ENSSSCG00000011261
ENSG00000114742
WD repeat domain 48
Tissue enhanced
Detected in all
testis:
51.1
WDR53
ENSSSCG00000036536
ENSG00000185798
WD repeat domain 53
Tissue enriched
Detected in all
testis:
58.9
WDR54
ENSSSCG00000008282
ENSG00000005448
WD repeat domain 54
Tissue enhanced
Detected in many
lens:
30.4
WDR55
ENSSSCG00000032062
ENSG00000120314
WD repeat domain 55
Low tissue specificity
Detected in all
WDR59
ENSSSCG00000002714
ENSG00000103091
WD repeat domain 59
Low tissue specificity
Detected in all
WDR6
ENSSSCG00000011369
ENSG00000178252
WD repeat domain 6
Low tissue specificity
Detected in all
WDR60
ENSSSCG00000038486
ENSG00000126870
WD repeat domain 60
Low tissue specificity
Detected in all
WDR61
ENSSSCG00000001757
ENSG00000140395
WD repeat domain 61
Tissue enhanced
Detected in all
lens:
45.0
WDR62
ENSSSCG00000002923
ENSG00000075702
WD repeat-containing protein 62
Tissue enriched
Detected in all
testis:
55.3
WDR63
ENSSSCG00000006950
ENSG00000162643
WD repeat domain 63
Tissue enhanced
Detected in all
choroid plexus:
39.6
fallopian tube:
50.5
WDR7
ENSSSCG00000004538
ENSG00000091157
WD repeat domain 7
Low tissue specificity
Detected in all
WDR70
ENSSSCG00000016846
ENSG00000082068
WD repeat domain 70
Low tissue specificity
Detected in all
WDR73
ENSSSCG00000022451
ENSG00000177082
WD repeat domain 73
Low tissue specificity
Detected in all
WDR74
ENSSSCG00000028025
ENSG00000133316
WD repeat-containing protein 74
Low tissue specificity
Detected in all
WDR75
ENSSSCG00000016036
ENSG00000115368
WD repeat domain 75
Low tissue specificity
Detected in all
WDR76
ENSSSCG00000004695
ENSG00000092470
WD repeat domain 76
Tissue enhanced
Detected in all
lymphoid tissue:
35.9
WDR77
ENSSSCG00000006790
ENSG00000116455
WD repeat domain 77
Low tissue specificity
Detected in all
WDR81
ENSSSCG00000040732
ENSG00000167716
WD repeat domain 81
Low tissue specificity
Detected in all
WDR82
ENSSSCG00000011433
ENSG00000164091
WD repeat domain 82
Low tissue specificity
Detected in all
WDR83
ENSSSCG00000013722
ENSG00000123154
WD repeat domain 83
Low tissue specificity
Detected in all
WDR86
ENSSSCG00000016437
ENSG00000187260
WD repeat domain 86
Low tissue specificity
Detected in many
WDR89
ENSSSCG00000005112
ENSG00000140006
WD repeat domain 89
Low tissue specificity
Detected in all
WDR90
ENSSSCG00000007991
ENSG00000161996
WD repeat domain 90
Tissue enhanced
Detected in many
fallopian tube:
22.0
WDR91
ENSSSCG00000016532
ENSG00000105875
WD repeat domain 91
Low tissue specificity
Detected in all
WDR92
ENSSSCG00000008353
ENSG00000243667
WD repeat domain 92
Low tissue specificity
Detected in all
WDR97
ENSSSCG00000005916
ENSG00000179698
WD repeat domain 97
Low tissue specificity
Detected in all
WDSUB1
ENSSSCG00000035702
ENSG00000196151
WD repeat, sterile alpha motif and U-box domain containing 1
Tissue enhanced
Detected in all
thyroid gland:
33.9
WDTC1
ENSSSCG00000003570
ENSG00000142784
WD and tetratricopeptide repeats protein 1
Low tissue specificity
Detected in all
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