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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Other diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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13607 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
MVD
ENSSSCG00000034905
ENSG00000167508
Mevalonate diphosphate decarboxylase
Low tissue specificity
Detected in all
MVK
ENSSSCG00000009931
ENSG00000110921
Mevalonate kinase
Tissue enriched
Detected in many
liver:
84.3
MVP
ENSSSCG00000027946
ENSG00000013364
Major vault protein
Low tissue specificity
Detected in all
MX1
ENSSSCG00000012077
ENSG00000157601
Interferon-induced GTP-binding protein Mx1
Low tissue specificity
Detected in all
MX2
ENSSSCG00000012076
ENSG00000183486
Interferon-induced GTP-binding protein Mx2
Low tissue specificity
Detected in all
MXD1
ENSSSCG00000008334
ENSG00000059728
MAX dimerization protein 1
Tissue enhanced
Detected in all
large intestine:
47.3
lens:
86.4
MXD3
ENSSSCG00000014041
ENSG00000213347
Max dimerization protein 3
Low tissue specificity
Detected in all
MXD4
ENSSSCG00000008687
ENSG00000123933
MAX dimerization protein 4
Low tissue specificity
Detected in all
MXI1
ENSSSCG00000022128
ENSG00000119950
MAX interactor 1, dimerization protein
Low tissue specificity
Detected in all
MXRA7
ENSSSCG00000037376
ENSG00000182534
Matrix remodeling associated 7
Low tissue specificity
Detected in all
MXRA8
ENSSSCG00000021880
ENSG00000162576
Matrix remodeling associated 8
Low tissue specificity
Detected in all
MYADML2
ENSSSCG00000032974
ENSG00000185105
Myeloid associated differentiation marker like 2
Tissue enhanced
Detected in all
skeletal muscle:
33.9
MYBBP1A
ENSSSCG00000017882
ENSG00000132382
MYB binding protein 1a
Low tissue specificity
Detected in all
MYBL1
ENSSSCG00000027872
ENSG00000185697
MYB proto-oncogene like 1
Tissue enhanced
Detected in many
lymphoid tissue:
44.4
penis:
18.7
MYBPHL
ENSSSCG00000006834
ENSG00000221986
Myosin binding protein H like
Tissue enriched
Detected in all
epididymis:
41.7
MYCBP2
ENSSSCG00000009473
ENSG00000005810
MYC binding protein 2, E3 ubiquitin protein ligase
Low tissue specificity
Detected in all
MYCL
ENSSSCG00000039761
ENSG00000116990
MYCL proto-oncogene, bHLH transcription factor
Tissue enhanced
Detected in many
stomach:
21.9
upper respiratory system:
27.0
urinary bladder:
33.8
MYCN
ENSSSCG00000008618
ENSG00000134323
MYCN proto-oncogene, bHLH transcription factor
Tissue enhanced
Detected in all
skin:
26.8
MYDGF
ENSSSCG00000034898
ENSG00000074842
Myeloid derived growth factor
Tissue enhanced
Detected in all
male glands:
46.8
MYEF2
ENSSSCG00000004661
ENSG00000104177
Myelin expression factor 2
Low tissue specificity
Detected in many
MYH13
ENSSSCG00000024416
ENSG00000006788
Myosin heavy chain 13
Tissue enhanced
Detected in many
skeletal muscle:
22.8
MYH14
ENSSSCG00000027407
ENSG00000105357
Myosin heavy chain 14
Tissue enhanced
Detected in many
cornea:
86.4
large intestine:
64.0
stomach:
61.9
MYH7
ENSSSCG00000002029
ENSG00000197616
Myosin-7
Group enriched
Detected in some
heart:
575.2
skeletal muscle:
287.0
MYH7B
ENSSSCG00000007288
ENSG00000078814
Myosin heavy chain 7B
Group enriched
Detected in many
heart:
57.1
lens:
20.8
skeletal muscle:
48.9
MYH9
ENSSSCG00000000145
ENSG00000100345
Myosin heavy chain 9
Low tissue specificity
Detected in all
MYL10
ENSSSCG00000007680
ENSG00000106436
Myosin light chain 10
Group enriched
Detected in some
cartilage:
8.6
lens:
21.4
synovial tissue:
7.9
MYL6
ENSSSCG00000039795
ENSG00000092841
Myosin light polypeptide 6
Tissue enhanced
Detected in all
smooth muscle:
405.0
MYL9
ENSSSCG00000036402
ENSG00000101335
Myosin regulatory light polypeptide 9
Tissue enhanced
Detected in many
smooth muscle:
241.8
urinary bladder:
100.0
MYLK4
ENSSSCG00000028777
ENSG00000145949
Myosin light chain kinase family member 4
Tissue enhanced
Detected in all
male glands:
34.9
skeletal muscle:
22.4
MYNN
ENSSSCG00000026829
ENSG00000085274
Myoneurin
Low tissue specificity
Detected in all
MYO10
ENSSSCG00000016794
ENSG00000145555
Myosin X
Low tissue specificity
Detected in all
MYO16
ENSSSCG00000009543
ENSG00000041515
Myosin XVI
Tissue enhanced
Detected in some
brain:
36.7
lens:
16.1
liver:
11.6
pineal gland:
12.5
retina:
11.4
MYO18B
ENSSSCG00000009957
ENSG00000133454
Myosin XVIIIB
Group enriched
Detected in some
heart:
26.2
skeletal muscle:
58.3
MYO1B
ENSSSCG00000016061
ENSG00000128641
Myosin IB
Tissue enhanced
Detected in all
lens:
79.8
male glands:
71.5
MYO1C
ENSSSCG00000021821
ENSG00000197879
Myosin IC
Low tissue specificity
Detected in many
MYO1E
ENSSSCG00000004587
ENSG00000157483
Myosin IE
Low tissue specificity
Detected in all
MYO1F
ENSSSCG00000013604
ENSG00000142347
Myosin IF
Low tissue specificity
Detected in all
MYO5A
ENSSSCG00000004620
ENSG00000197535
CAMP-regulated phosphoprotein 19
Tissue enhanced
Detected in all
brain:
69.8
MYO5B
ENSSSCG00000004511
ENSG00000167306
Myosin VB
Tissue enhanced
Detected in many
lens:
59.4
MYO6
ENSSSCG00000004478
ENSG00000196586
Unconventional myosin-VI
Low tissue specificity
Detected in all
MYO7A
ENSSSCG00000014876
ENSG00000137474
Unconventional myosin-VIIa
Tissue enhanced
Detected in many
adrenal gland:
29.3
kidney:
37.4
MYO9A
ENSSSCG00000004979
ENSG00000066933
Myosin IXA
Low tissue specificity
Detected in all
MYO9B
ENSSSCG00000013876
ENSG00000099331
Myosin IXB
Low tissue specificity
Detected in all
MYOF
ENSSSCG00000010476
ENSG00000138119
Myoferlin
Low tissue specificity
Detected in all
MYOG
ENSSSCG00000034654
ENSG00000122180
Myogenin
Tissue enhanced
Detected in many
skeletal muscle:
27.7
MYORG
ENSSSCG00000033196
ENSG00000164976
Myogenesis regulating glycosidase (putative)
Tissue enhanced
Detected in all
heart:
42.5
skeletal muscle:
45.8
MYPOP
ENSSSCG00000038739
ENSG00000176182
Myb related transcription factor, partner of profilin
Low tissue specificity
Detected in all
MYRF
ENSSSCG00000013078
ENSG00000124920
Myelin regulatory factor
Group enriched
Detected in many
adipose tissue:
28.3
brain:
62.5
gallbladder:
23.3
mesothelial tissue:
37.1
stomach:
55.6
MYRFL
ENSSSCG00000023936
ENSG00000166268
Myelin regulatory factor-like
Tissue enhanced
Detected in all
small intestine:
29.4
MYRIP
ENSSSCG00000011269
ENSG00000170011
Rab effector MyRIP
Tissue enhanced
Detected in many
male glands:
35.2
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