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Human disease related genes
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Chromosome
1
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MT
Unmapped
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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15311 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
GPR146
ENSSSCG00000032156
ENSG00000164849
G protein-coupled receptor 146
Low tissue specificity
Detected in all
GPR149
ENSSSCG00000023582
ENSG00000174948
Probable G-protein coupled receptor 149
Low tissue specificity
Detected in all
GPR152
ENSSSCG00000033777
ENSG00000175514
G protein-coupled receptor 152
Low tissue specificity
Detected in all
GPR153
ENSSSCG00000003371
ENSG00000158292
G protein-coupled receptor 153
Low tissue specificity
Detected in many
GPR155
ENSSSCG00000015965
ENSG00000163328
G protein-coupled receptor 155
Low tissue specificity
Detected in all
GPR157
ENSSSCG00000033456
ENSG00000180758
G protein-coupled receptor 157
Tissue enhanced
Detected in many
heart:
23.8
skeletal muscle:
55.1
GPR160
ENSSSCG00000035883
ENSG00000173890
G protein-coupled receptor 160
Tissue enhanced
Detected in many
large intestine:
20.6
lens:
69.3
GPR161
ENSSSCG00000006302
ENSG00000143147
G protein-coupled receptor 161
Tissue enriched
Detected in many
testis:
57.7
GPR162
ENSSSCG00000000680
ENSG00000250510
G protein-coupled receptor 162
Tissue enhanced
Detected in some
brain:
25.9
pineal gland:
21.5
GPR17
ENSSSCG00000040850
ENSG00000144230
G protein-coupled receptor 17
Tissue enhanced
Detected in all
brain:
22.1
GPR171
ENSSSCG00000036844
ENSG00000174946
G protein-coupled receptor 171
Tissue enhanced
Detected in all
choroid plexus:
28.1
GPR173
ENSSSCG00000024958
ENSG00000184194
G protein-coupled receptor 173
Low tissue specificity
Detected in many
GPR174
ENSSSCG00000021734
ENSG00000147138
G protein-coupled receptor 174
Tissue enhanced
Detected in many
lymphoid tissue:
34.9
GPR176
ENSSSCG00000004787
ENSG00000166073
G protein-coupled receptor 176
Low tissue specificity
Detected in all
GPR179
ENSSSCG00000020884
ENSG00000277399
G protein-coupled receptor 179
Group enriched
Detected in many
lens:
7.3
retina:
26.4
GPR18
ENSSSCG00000031999
ENSG00000125245
G protein-coupled receptor 18
Tissue enhanced
Detected in many
lymphoid tissue:
34.8
GPR180
ENSSSCG00000009492
ENSG00000152749
G protein-coupled receptor 180
Low tissue specificity
Detected in all
GPR183
ENSSSCG00000009517
ENSG00000169508
G protein-coupled receptor 183
Tissue enhanced
Detected in all
lymphoid tissue:
43.2
GPR27
ENSSSCG00000036580
ENSG00000170837
G protein-coupled receptor 27
Low tissue specificity
Detected in many
GPR33
ENSSSCG00000025131
ENSG00000214943
Probable G-protein coupled receptor 33
Low tissue specificity
Detected in many
GPR35
ENSSSCG00000040095
ENSG00000178623
G protein-coupled receptor 35
Tissue enhanced
Detected in many
lymphoid tissue:
13.5
stomach:
19.9
GPR39
ENSSSCG00000015707
ENSG00000183840
G protein-coupled receptor 39
Tissue enhanced
Detected in many
liver:
28.1
stomach:
25.8
GPR4
ENSSSCG00000037184
ENSG00000177464
G-protein coupled receptor 4
Tissue enhanced
Detected in many
mesothelial tissue:
38.0
GPR52
ENSSSCG00000040789
ENSG00000203737
G protein-coupled receptor 52
Tissue enhanced
Detected in many
brain:
24.7
heart:
39.7
GPR63
ENSSSCG00000035240
ENSG00000112218
G protein-coupled receptor 63
Tissue enhanced
Detected in many
brain:
18.9
lens:
15.6
GPR83
ENSSSCG00000022490
ENSG00000123901
Probable G-protein coupled receptor 83 precursor
Tissue enhanced
Detected in all
brain:
16.8
breast:
14.4
GPR87
ENSSSCG00000032365
ENSG00000138271
G protein-coupled receptor 87
Tissue enhanced
Detected in all
choroid plexus:
30.0
GPRASP1
ENSSSCG00000012519
ENSG00000198932
G protein-coupled receptor associated sorting protein 1
Group enriched
Detected in many
brain:
27.5
pineal gland:
9.4
pituitary gland:
24.3
GPRASP2
ENSSSCG00000012521
ENSG00000158301
G protein-coupled receptor associated sorting protein 2
Tissue enhanced
Detected in many
brain:
35.6
pituitary gland:
31.8
GPRC5B
ENSSSCG00000007864
ENSG00000167191
G protein-coupled receptor class C group 5 member B
Tissue enhanced
Detected in all
brain:
75.1
lens:
84.2
ovary:
63.1
GPRC5C
ENSSSCG00000040989
ENSG00000170412
G protein-coupled receptor class C group 5 member C
Tissue enhanced
Detected in all
stomach:
56.2
GPRC5D
ENSSSCG00000029545
ENSG00000111291
G protein-coupled receptor class C group 5 member D
Tissue enriched
Detected in many
skin:
68.9
GPRC6A
ENSSSCG00000036207
ENSG00000173612
G protein-coupled receptor class C group 6 member A
Low tissue specificity
Detected in all
GPRIN1
ENSSSCG00000014054
ENSG00000169258
G protein regulated inducer of neurite outgrowth 1
Group enriched
Detected in many
brain:
36.5
pituitary gland:
9.1
GPS1
ENSSSCG00000033689
ENSG00000169727
G protein pathway suppressor 1
Low tissue specificity
Detected in all
GPSM1
ENSSSCG00000039487
ENSG00000160360
G protein signaling modulator 1
Tissue enhanced
Detected in all
brain:
35.1
GPSM2
ENSSSCG00000021440
ENSG00000121957
G protein signaling modulator 2
Tissue enhanced
Detected in all
brain:
32.4
GPT2
ENSSSCG00000002847
ENSG00000166123
Glutamic--pyruvic transaminase 2
Tissue enhanced
Detected in many
brain:
43.4
kidney:
59.2
liver:
39.4
GPX1
ENSSSCG00000033727
Glutathione peroxidase 1
Low tissue specificity
Detected in all
GPX4
ENSSSCG00000024052
ENSG00000167468
Phospholipid hydroperoxide glutathione peroxidase, mitochondrial
Tissue enhanced
Detected in all
lens:
91.2
testis:
112.1
GPX5
ENSSSCG00000001214
ENSG00000224586
Epididymal secretory glutathione peroxidase
Tissue enriched
Detected in many
epididymis:
80.6
GPX6
ENSSSCG00000001213
ENSG00000198704
Glutathione peroxidase 6 precursor
Tissue enriched
Detected in some
male glands:
109.1
GPX7
ENSSSCG00000038094
ENSG00000116157
Glutathione peroxidase 7
Low tissue specificity
Detected in many
GPX8
ENSSSCG00000021973
ENSG00000164294
Glutathione peroxidase 8 (putative)
Tissue enhanced
Detected in many
male glands:
42.8
ovary:
33.4
GRAMD1A
ENSSSCG00000002879
ENSG00000089351
GRAM domain containing 1A
Low tissue specificity
Detected in all
GRAMD1B
ENSSSCG00000015144
ENSG00000023171
GRAM domain containing 1B
Tissue enhanced
Detected in many
adrenal gland:
111.6
kidney:
48.9
ovary:
43.4
GRAMD1C
ENSSSCG00000011915
ENSG00000178075
GRAM domain containing 1C
Low tissue specificity
Detected in all
GRAMD2B
ENSSSCG00000022402
ENSG00000155324
GRAM domain-containing protein 3
Low tissue specificity
Detected in many
GRAMD4
ENSSSCG00000031441
ENSG00000075240
GRAM domain containing 4
Tissue enhanced
Detected in all
stomach:
35.1
GRAP2
ENSSSCG00000000080
ENSG00000100351
GRB2-related adaptor protein 2
Tissue enhanced
Detected in all
lymphoid tissue:
44.2
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