We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
390 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 8
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
STX11
ENSSSCG00000004125
ENSG00000135604
Syntaxin 11
Tissue enhanced
Detected in many
lung:
17.8
STX19
ENSSSCG00000025170
ENSG00000178750
Syntaxin 19
Low tissue specificity
Detected in all
SULT1C2
ENSSSCG00000022153
ENSG00000198203
Sulfotransferase family 1C member 2
Tissue enhanced
Detected in all
kidney:
34.7
stomach:
54.8
SYK
ENSSSCG00000009589
ENSG00000165025
Tyrosine-protein kinase SYK
Tissue enhanced
Detected in many
lymphoid tissue:
45.1
upper respiratory system:
24.1
SYT1
ENSSSCG00000000948
ENSG00000067715
Synaptotagmin 1
Group enriched
Detected in some
brain:
76.2
retina:
43.4
SYT11
ENSSSCG00000006506
ENSG00000132718
Synaptotagmin 11
Tissue enhanced
Detected in many
brain:
65.9
pineal gland:
17.5
SYTL5
ENSSSCG00000012233
ENSG00000147041
Synaptotagmin like 5
Tissue enhanced
Detected in many
male glands:
39.9
stomach:
20.9
TACC3
ENSSSCG00000008677
ENSG00000013810
Transforming acidic coiled-coil containing protein 3
Tissue enhanced
Detected in all
lymphoid tissue:
28.4
stomach:
29.7
testis:
35.4
TC2N
ENSSSCG00000002443
ENSG00000165929
Tandem C2 domains, nuclear
Tissue enhanced
Detected in many
male glands:
33.1
upper respiratory system:
31.0
TCF7
ENSSSCG00000030680
ENSG00000081059
Transcription factor 7
Tissue enriched
Detected in many
lymphoid tissue:
169.9
TCN1
ENSSSCG00000039252
ENSG00000134827
Transcobalamin 1
Group enriched
Detected in all
small intestine:
207.7
stomach:
156.3
TFF2
ENSSSCG00000024320
ENSG00000160181
Trefoil factor 2
Group enriched
Detected in some
small intestine:
670.0
stomach:
368.3
TFF3
ENSSSCG00000022857
ENSG00000160180
Trefoil factor 3 precursor
Group enriched
Detected in many
male glands:
394.8
upper respiratory system:
123.4
TGM3
ENSSSCG00000026043
ENSG00000125780
Transglutaminase 3
Tissue enriched
Detected in some
stomach:
124.6
TMC8
ENSSSCG00000033592
ENSG00000167895
Transmembrane channel like 8
Tissue enhanced
Detected in many
lymphoid tissue:
39.0
TMEM151A
ENSSSCG00000012952
ENSG00000179292
Transmembrane protein 151A
Tissue enhanced
Detected in many
brain:
30.6
mesothelial tissue:
12.6
TMEM154
ENSSSCG00000009012
ENSG00000170006
Transmembrane protein 154
Tissue enhanced
Detected in many
lymphoid tissue:
26.3
male glands:
49.1
TMEM176A
ENSSSCG00000016443
ENSG00000002933
Transmembrane protein 176A
Tissue enhanced
Detected in many
gallbladder:
91.7
TMEM61
ENSSSCG00000025097
ENSG00000143001
Transmembrane protein 61
Low tissue specificity
Detected in all
TMPRSS3
ENSSSCG00000022568
ENSG00000160183
Transmembrane serine protease 3
Tissue enriched
Detected in some
stomach:
21.2
TNFRSF4
ENSSSCG00000003331
ENSG00000186827
TNF receptor superfamily member 4
Tissue enhanced
Detected in some
lung:
9.0
lymphoid tissue:
32.2
stomach:
12.7
TNFRSF8
ENSSSCG00000003437
ENSG00000120949
TNF receptor superfamily member 8
Tissue enhanced
Detected in many
lung:
15.2
ovary:
33.7
TNFSF13B
ENSSSCG00000009542
ENSG00000102524
Tumor necrosis factor ligand superfamily member 13B
Tissue enhanced
Detected in many
lymphoid tissue:
16.1
small intestine:
37.3
stomach:
17.4
TNFSF14
ENSSSCG00000026695
ENSG00000125735
Tumor necrosis factor ligand superfamily member 14
Tissue enhanced
Detected in many
stomach:
22.8
TOX2
ENSSSCG00000022202
ENSG00000124191
TOX high mobility group box family member 2
Group enriched
Detected in many
brain:
14.4
lens:
50.9
lymphoid tissue:
36.0
pituitary gland:
19.8
TRBV19
ENSSSCG00000016479
T cell receptor beta variable 19
Tissue enriched
Detected in some
lymphoid tissue:
62.0
TRPC1
ENSSSCG00000011681
ENSG00000144935
Short transient receptor potential channel 1
Tissue enhanced
Detected in all
retina:
51.3
TRPM5
ENSSSCG00000039644
ENSG00000070985
Transient receptor potential cation channel subfamily M member 5
Tissue enriched
Detected in some
kidney:
89.7
TSPAN2
ENSSSCG00000006748
ENSG00000134198
Tetraspanin 2
Tissue enhanced
Detected in many
cervix:
42.1
smooth muscle:
36.8
TTLL7
ENSSSCG00000003760
ENSG00000137941
Tubulin tyrosine ligase like 7
Tissue enhanced
Detected in many
brain:
61.5
smooth muscle:
23.3
TUB
ENSSSCG00000014581
ENSG00000166402
Tubby bipartite transcription factor
Tissue enhanced
Detected in many
stomach:
57.3
TUSC3
ENSSSCG00000021988
ENSG00000104723
Tumor suppressor candidate 3
Tissue enhanced
Detected in many
epididymis:
41.1
pineal gland:
61.3
pituitary gland:
43.7
UTF1
ENSSSCG00000010771
ENSG00000171794
Undifferentiated embryonic cell transcription factor 1
Group enriched
Detected in some
stomach:
21.6
testis:
9.9
VSIG2
ENSSSCG00000015199
ENSG00000019102
V-set and immunoglobulin domain containing 2
Tissue enhanced
Detected in many
stomach:
83.1
vagus nerve:
27.1
WFDC2
ENSSSCG00000033003
ENSG00000101443
WAP four-disulfide core domain protein 2
Tissue enhanced
Detected in many
endometrium:
69.1
upper respiratory system:
173.1
XYLT1
ENSSSCG00000007872
ENSG00000103489
Xylosyltransferase 1
Tissue enriched
Detected in many
cartilage:
92.2
ZC3H12A
ENSSSCG00000037815
ENSG00000163874
Zinc finger CCCH-type containing 12A
Tissue enhanced
Detected in many
stomach:
50.2
ZC3H12D
ENSSSCG00000004109
ENSG00000178199
Zinc finger CCCH-type containing 12D
Tissue enhanced
Detected in many
lymphoid tissue:
39.5
stomach:
18.2
upper respiratory system:
18.7
ZNF385C
ENSSSCG00000028051
ENSG00000187595
Zinc finger protein 385C
Tissue enhanced
Detected in many
cartilage:
30.6
stomach:
61.6
ZNF831
ENSSSCG00000007526
ENSG00000124203
Zinc finger protein 831
Tissue enhanced
Detected in some
lymphoid tissue:
19.1
stomach:
13.1
« prev
| Page
of 8