We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
390 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 8 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
IRX5
ENSSSCG00000032145
ENSG00000176842
Iroquois homeobox 5
Tissue enhanced
Detected in many
breast:
32.9
male glands:
51.4
ISL1
ENSSSCG00000016883
ENSG00000016082
ISL LIM homeobox 1
Tissue enhanced
Detected in many
male glands:
16.6
penis:
36.4
ITGAV
ENSSSCG00000016027
ENSG00000138448
Integrin alpha-V precursor
Tissue enhanced
Detected in all
ovary:
65.8
KCNK10
ENSSSCG00000002423
ENSG00000100433
Potassium two pore domain channel subfamily K member 10
Tissue enhanced
Detected in many
brain:
24.4
cornea:
12.3
stomach:
23.1
KCNN4
ENSSSCG00000003069
ENSG00000104783
Intermediate conductance calcium-activated potassium channel protein 4
Tissue enhanced
Detected in some
esophagus:
17.7
male glands:
41.4
salivary gland:
35.3
upper respiratory system:
24.5
KCTD17
ENSSSCG00000000135
ENSG00000100379
Potassium channel tetramerization domain containing 17
Tissue enhanced
Detected in many
brain:
47.4
stomach:
34.6
KIAA1324
ENSSSCG00000006836
ENSG00000116299
KIAA1324
Tissue enhanced
Detected in many
male glands:
100.4
pituitary gland:
104.7
salivary gland:
32.1
KIF21A
ENSSSCG00000000779
ENSG00000139116
Kinesin family member 21A
Tissue enhanced
Detected in many
brain:
42.1
lens:
29.2
retina:
31.1
KIF21B
ENSSSCG00000021706
ENSG00000116852
Kinesin family member 21B
Tissue enhanced
Detected in many
brain:
29.8
stomach:
22.5
KLHDC1
ENSSSCG00000032489
ENSG00000197776
Kelch domain containing 1
Low tissue specificity
Detected in all
KMO
ENSSSCG00000025686
ENSG00000117009
Kynurenine 3-monooxygenase
Tissue enhanced
Detected in many
kidney:
24.8
liver:
62.8
LAMB1
ENSSSCG00000015444
ENSG00000091136
Laminin subunit beta 1
Low tissue specificity
Detected in all
LEF1
ENSSSCG00000009148
ENSG00000138795
Lymphoid enhancer-binding factor 1
Tissue enriched
Detected in many
lymphoid tissue:
206.1
LIMD2
ENSSSCG00000040509
ENSG00000136490
LIM domain-containing protein 2
Tissue enhanced
Detected in many
lymphoid tissue:
51.5
LIPH
ENSSSCG00000011793
ENSG00000163898
Lipase H
Tissue enhanced
Detected in many
ovary:
13.1
stomach:
28.9
LIX1
ENSSSCG00000023396
ENSG00000145721
Limb and CNS expressed 1
Group enriched
Detected in many
heart:
54.7
lymphoid tissue:
21.5
smooth muscle:
25.8
LYL1
ENSSSCG00000024549
ENSG00000104903
LYL1, basic helix-loop-helix family member
Tissue enhanced
Detected in many
lymphoid tissue:
59.9
LYPD6B
ENSSSCG00000015677
ENSG00000150556
LY6/PLAUR domain containing 6B
Tissue enhanced
Detected in many
male glands:
19.8
pituitary gland:
30.7
skin:
18.5
LYZ
ENSSSCG00000000492
ENSG00000090382
Lysozyme C-3 precursor
Tissue enhanced
Detected in many
large intestine:
87.6
small intestine:
117.4
stomach:
158.7
MAMDC2
ENSSSCG00000030655
ENSG00000165072
MAM domain-containing protein 2
Tissue enhanced
Detected in many
smooth muscle:
34.5
MANSC1
ENSSSCG00000040835
ENSG00000111261
MANSC domain containing 1
Tissue enhanced
Detected in all
male glands:
78.7
MAP2
ENSSSCG00000016151
ENSG00000078018
Microtubule associated protein 2
Tissue enhanced
Detected in many
brain:
87.1
pineal gland:
30.2
pituitary gland:
23.3
retina:
21.2
MAP3K15
ENSSSCG00000020735
ENSG00000180815
Mitogen-activated protein kinase kinase kinase 15
Tissue enriched
Detected in some
choroid plexus:
38.1
MAPK10
ENSSSCG00000009228
ENSG00000109339
Mitogen-activated protein kinase 10
Tissue enhanced
Detected in many
brain:
50.3
MAPK8IP2
ENSSSCG00000031660
ENSG00000008735
Mitogen-activated protein kinase 8 interacting protein 2
Tissue enhanced
Detected in some
brain:
39.8
pineal gland:
10.7
pituitary gland:
13.4
retina:
15.7
MEIS2
ENSSSCG00000004795
ENSG00000134138
Meis homeobox 2
Tissue enhanced
Detected in many
brain:
76.8
cervix:
58.1
MGAT3
ENSSSCG00000038126
ENSG00000128268
Mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
Tissue enhanced
Detected in many
stomach:
23.8
vagus nerve:
33.5
MICU3
ENSSSCG00000006981
ENSG00000155970
Mitochondrial calcium uptake family member 3
Tissue enhanced
Detected in all
brain:
41.3
MMP13
ENSSSCG00000014988
ENSG00000137745
Matrix metallopeptidase 13
Group enriched
Detected in some
bone marrow:
49.1
dura mater:
123.1
MNX1
ENSSSCG00000016410
ENSG00000130675
Motor neuron and pancreas homeobox 1
Group enriched
Detected in some
brain:
7.3
large intestine:
8.7
small intestine:
12.0
stomach:
9.7
MOGAT1
ENSSSCG00000016225
ENSG00000124003
Monoacylglycerol O-acyltransferase 1
Tissue enhanced
Detected in many
liver:
46.2
small intestine:
16.4
MTHFD2L
ENSSSCG00000008961
ENSG00000163738
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like
Low tissue specificity
Detected in many
MYBL2
ENSSSCG00000007366
ENSG00000101057
Myb-related protein B
Tissue enhanced
Detected in many
lymphoid tissue:
50.3
stomach:
31.0
upper respiratory system:
36.3
MYO16
ENSSSCG00000009543
ENSG00000041515
Myosin XVI
Tissue enhanced
Detected in some
brain:
36.7
lens:
16.1
liver:
11.6
pineal gland:
12.5
retina:
11.4
MYO7B
ENSSSCG00000015864
ENSG00000169994
Myosin VIIB
Group enriched
Detected in some
large intestine:
60.4
small intestine:
45.6
MZB1
ENSSSCG00000029239
ENSG00000170476
Marginal zone B and B1 cell specific protein
Tissue enhanced
Detected in some
large intestine:
16.3
lung:
16.0
lymphoid tissue:
14.3
small intestine:
18.5
stomach:
20.8
upper respiratory system:
32.6
na
ENSSSCG00000001131
ENSG00000112763,ENSG00000124508
Tissue enhanced
Detected in many
lymphoid tissue:
35.9
male glands:
22.6
stomach:
18.4
na
ENSSSCG00000003080
ENSG00000216588
Tissue enhanced
Detected in some
large intestine:
16.8
ovary:
33.9
small intestine:
27.1
na
ENSSSCG00000003868
Low tissue specificity
Detected in all
na
ENSSSCG00000004760
ENSG00000166143
Protein phosphatase 1 regulatory subunit 14D
Tissue enhanced
Detected in many
large intestine:
29.3
male glands:
15.4
small intestine:
14.3
na
ENSSSCG00000005623
Tissue enhanced
Detected in all
epididymis:
76.9
na
ENSSSCG00000006317
Group enriched
Detected in some
adrenal gland:
12.2
liver:
12.8
stomach:
15.5
na
ENSSSCG00000006382
ENSG00000162739
Tissue enhanced
Detected in all
lymphoid tissue:
54.3
stomach:
29.1
na
ENSSSCG00000006932
ENSG00000016602
Group enriched
Detected in some
large intestine:
64.1
small intestine:
113.7
na
ENSSSCG00000008954
Tissue enhanced
Detected in many
cartilage:
86.3
liver:
86.3
na
ENSSSCG00000009000
Tissue enriched
Detected in some
pineal gland:
34.1
na
ENSSSCG00000009162
ENSG00000164037
Tissue enriched
Detected in many
testis:
42.6
na
ENSSSCG00000011768
ENSG00000284862
Low tissue specificity
Detected in all
na
ENSSSCG00000011850
ENSG00000145113
Mucin-4 precursor
Tissue enriched
Detected in many
upper respiratory system:
155.9
na
ENSSSCG00000011903
ENSG00000121578
Low tissue specificity
Detected in many
« prev
| Page
of 8 |
next »