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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
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5
6
7
8
9
10
11
12
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14
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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3366 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000040739
Low tissue specificity
Detected in all
na
ENSSSCG00000040748
Tissue enhanced
Detected in many
male glands:
25.3
na
ENSSSCG00000040752
Low tissue specificity
Detected in all
na
ENSSSCG00000040755
Tissue enhanced
Detected in many
cervix:
30.0
na
ENSSSCG00000040767
Low tissue specificity
Detected in all
na
ENSSSCG00000040771
Low tissue specificity
Detected in many
na
ENSSSCG00000040779
ENSG00000160200,ENSG00000274276
Group enriched
Detected in many
epididymis:
23.8
liver:
88.1
na
ENSSSCG00000040831
Tissue enhanced
Detected in many
liver:
141.4
na
ENSSSCG00000040864
Low tissue specificity
Detected in all
na
ENSSSCG00000040889
ENSG00000134248
Ragulator complex protein LAMTOR5
Low tissue specificity
Detected in all
na
ENSSSCG00000040939
Low tissue specificity
Detected in all
na
ENSSSCG00000040942
Beta-1,4 N-acetylgalactosaminyltransferase 2
Low tissue specificity
Detected in all
na
ENSSSCG00000040958
ENSG00000213281
Low tissue specificity
Detected in all
na
ENSSSCG00000040984
ENSG00000137168
Low tissue specificity
Detected in all
na
ENSSSCG00000040988
Tissue enhanced
Detected in many
brain:
46.8
male glands:
71.3
vagus nerve:
78.9
NAA20
ENSSSCG00000028132
ENSG00000173418
N(alpha)-acetyltransferase 20, NatB catalytic subunit
Tissue enhanced
Detected in all
lens:
111.9
NAA38
ENSSSCG00000017971
ENSG00000183011
N(alpha)-acetyltransferase 38, NatC auxiliary subunit
Low tissue specificity
Detected in all
NANOS1
ENSSSCG00000040025
ENSG00000188613
Nanos C2HC-type zinc finger 1
Tissue enhanced
Detected in many
male glands:
21.9
synovial tissue:
16.4
NAP1L3
ENSSSCG00000012504
ENSG00000186310
Nucleosome assembly protein 1 like 3
Tissue enhanced
Detected in many
brain:
52.8
NAPEPLD
ENSSSCG00000022903
ENSG00000161048
N-acyl phosphatidylethanolamine phospholipase D
Tissue enhanced
Detected in all
thyroid gland:
74.2
NARF
ENSSSCG00000017126
ENSG00000141562
Nuclear prelamin A recognition factor
Tissue enhanced
Detected in all
lens:
86.9
NAV1
ENSSSCG00000010915
ENSG00000134369
Neuron navigator 1
Low tissue specificity
Detected in all
NAV2
ENSSSCG00000013351
ENSG00000166833
Neuron navigator 2
Low tissue specificity
Detected in all
NBEA
ENSSSCG00000034348
ENSG00000172915
Neurobeachin
Low tissue specificity
Detected in all
NBL1
ENSSSCG00000024669
ENSG00000158747
Neuroblastoma 1, DAN family BMP antagonist
Tissue enhanced
Detected in all
cervix:
154.2
male glands:
140.5
NCCRP1
ENSSSCG00000026407
ENSG00000188505
Non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)
Tissue enhanced
Detected in many
cornea:
45.8
mouth:
50.5
urinary bladder:
41.3
NCEH1
ENSSSCG00000011755
ENSG00000144959
Neutral cholesterol ester hydrolase 1
Tissue enhanced
Detected in all
heart:
73.7
NCK1
ENSSSCG00000025701
ENSG00000158092
Cytoplasmic protein NCK1
Low tissue specificity
Detected in all
NCK2
ENSSSCG00000008144
ENSG00000071051
Cytoplasmic protein NCK2
Tissue enhanced
Detected in all
lens:
92.4
NCKAP1
ENSSSCG00000016019
ENSG00000061676
NCK associated protein 1
Tissue enhanced
Detected in all
brain:
64.9
NCOA4
ENSSSCG00000010399
ENSG00000266412
Nuclear receptor coactivator 4
Tissue enriched
Detected in all
male glands:
156.0
NCOR2
ENSSSCG00000009761
ENSG00000196498
Nuclear receptor corepressor 2
Tissue enhanced
Detected in all
cartilage:
116.3
ND1
ENSSSCG00000018065
ENSG00000198888
NADH dehydrogenase subunit 1 (mitochondrion)
Tissue enhanced
Detected in all
heart:
1382.7
ND2
ENSSSCG00000018069
ENSG00000198763
NADH-ubiquinone oxidoreductase chain 2
Tissue enhanced
Detected in all
heart:
888.1
ND3
ENSSSCG00000018084
ENSG00000198840
NADH-ubiquinone oxidoreductase chain 3
Tissue enhanced
Detected in all
heart:
1339.5
ND4
ENSSSCG00000018087
ENSG00000198886
NADH-ubiquinone oxidoreductase chain 4
Tissue enhanced
Detected in all
heart:
1220.5
ND4L
ENSSSCG00000018086
ENSG00000212907
NADH-ubiquinone oxidoreductase chain 4L
Tissue enhanced
Detected in all
heart:
1287.2
ND5
ENSSSCG00000018091
ENSG00000198786
NADH-ubiquinone oxidoreductase chain 5
Tissue enhanced
Detected in all
heart:
1058.0
NDC1
ENSSSCG00000028748
ENSG00000058804
NDC1 transmembrane nucleoporin
Low tissue specificity
Detected in all
NDFIP2
ENSSSCG00000009480
ENSG00000102471
Nedd4 family interacting protein 2
Tissue enhanced
Detected in all
brain:
45.1
NDP
ENSSSCG00000029656
ENSG00000124479
Norrin precursor
Tissue enhanced
Detected in many
brain:
31.8
pineal gland:
14.7
NDRG4
ENSSSCG00000021911
ENSG00000103034
NDRG family member 4
Tissue enhanced
Detected in many
brain:
86.8
cervix:
82.2
NDST1
ENSSSCG00000032731
ENSG00000070614
N-deacetylase and N-sulfotransferase 1
Low tissue specificity
Detected in all
NDST3
ENSSSCG00000009115
ENSG00000164100
N-deacetylase and N-sulfotransferase 3
Tissue enhanced
Detected in all
brain:
28.1
thyroid gland:
26.9
NDUFA11
ENSSSCG00000027307
NADH dehydrogenase
Low tissue specificity
Detected in all
NDUFA13
ENSSSCG00000013936
ENSG00000186010
NADH dehydrogenase
Tissue enhanced
Detected in all
testis:
78.2
NDUFA8
ENSSSCG00000005528
ENSG00000119421
NADH dehydrogenase
Tissue enhanced
Detected in all
pineal gland:
49.0
NDUFB2
ENSSSCG00000032390
ENSG00000090266
NADH dehydrogenase
Low tissue specificity
Detected in all
NDUFB7
ENSSSCG00000013778
ENSG00000099795
NADH:ubiquinone oxidoreductase subunit B7
Low tissue specificity
Detected in all
NDUFB8
ENSSSCG00000006166
NADH dehydrogenase
Tissue enhanced
Detected in all
lens:
60.6
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