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Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Keyword
Chromosome
1
2
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6
7
8
9
10
11
12
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
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Lymphoid tissue
Male glands
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Mouth
Skin
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
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TECHNICAL DATA
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RELEASE HISTORY
916 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
ELL2
ENSSSCG00000014168
ENSG00000118985
Elongation factor for RNA polymerase II 2
Tissue enhanced
Detected in all
lens:
121.3
EMP1
ENSSSCG00000036723
ENSG00000134531
Epithelial membrane protein 1
Tissue enhanced
Detected in many
cornea:
92.1
mouth:
75.9
EMX1
ENSSSCG00000008308
ENSG00000135638
Empty spiracles homeobox 1
Group enriched
Detected in some
brain:
12.2
kidney:
19.2
ENDOD1
ENSSSCG00000014965
ENSG00000149218
Endonuclease domain containing 1
Tissue enhanced
Detected in many
brain:
36.4
ENOSF1
ENSSSCG00000027169
ENSG00000132199
Mitochondrial enolase superfamily member 1
Tissue enhanced
Detected in all
kidney:
42.8
ENOX1
ENSSSCG00000021818
ENSG00000120658
Ecto-NOX disulfide-thiol exchanger 1
Tissue enhanced
Detected in many
cornea:
37.1
ENOX2
ENSSSCG00000012663
ENSG00000165675
Ecto-NOX disulfide-thiol exchanger 2
Low tissue specificity
Detected in all
ENPEP
ENSSSCG00000009132
ENSG00000138792
Glutamyl aminopeptidase
Group enriched
Detected in many
kidney:
65.2
small intestine:
88.1
ENPP6
ENSSSCG00000015781
ENSG00000164303
Ectonucleotide pyrophosphatase/phosphodiesterase 6
Group enriched
Detected in many
brain:
28.3
dura mater:
19.9
gallbladder:
12.6
kidney:
23.9
lung:
41.1
ENTPD8
ENSSSCG00000005852
ENSG00000188833
Ectonucleoside triphosphate diphosphohydrolase 8
Tissue enhanced
Detected in many
large intestine:
17.8
small intestine:
17.9
stomach:
17.7
EPB41L3
ENSSSCG00000003687
ENSG00000082397
Erythrocyte membrane protein band 4.1 like 3
Tissue enhanced
Detected in all
kidney:
67.4
EPDR1
ENSSSCG00000020963
ENSG00000086289
Ependymin related 1
Tissue enhanced
Detected in many
brain:
36.2
lens:
43.4
EPHB3
ENSSSCG00000026516
ENSG00000182580
EPH receptor B3
Tissue enhanced
Detected in all
male glands:
45.3
EPN3
ENSSSCG00000027226
ENSG00000049283
Epsin 3
Tissue enhanced
Detected in many
kidney:
33.8
male glands:
29.5
salivary gland:
24.1
stomach:
33.2
thyroid gland:
22.0
ERAS
ENSSSCG00000028452
ENSG00000187682
ES cell expressed Ras
Tissue enriched
Detected in some
kidney:
21.6
ERICH4
ENSSSCG00000040022
ENSG00000204978
Glutamate rich 4
Tissue enhanced
Detected in many
kidney:
13.1
small intestine:
14.2
ERICH5
ENSSSCG00000006080
ENSG00000177459
Glutamate rich 5
Group enriched
Detected in some
cornea:
89.6
lens:
86.8
ERRFI1
ENSSSCG00000035774
ENSG00000116285
ERBB receptor feedback inhibitor 1
Tissue enhanced
Detected in all
cartilage:
241.4
liver:
92.9
synovial tissue:
95.5
ETNPPL
ENSSSCG00000009144
ENSG00000164089
Ethanolamine-phosphate phospho-lyase
Tissue enhanced
Detected in some
brain:
32.5
liver:
20.4
lymphoid tissue:
10.6
ETV5
ENSSSCG00000023229
ENSG00000244405
ETS translocation variant 5
Tissue enhanced
Detected in all
cartilage:
36.1
EXTL1
ENSSSCG00000029558
ENSG00000158008
Exostosin like glycosyltransferase 1
Group enriched
Detected in many
cartilage:
76.1
liver:
72.3
F12
ENSSSCG00000031274
ENSG00000131187
Coagulation factor XII precursor
Tissue enriched
Detected in many
liver:
125.1
F2
ENSSSCG00000013252
ENSG00000180210
Prothrombin precursor
Tissue enriched
Detected in some
liver:
165.9
F9
ENSSSCG00000012711
ENSG00000101981
Coagulation factor IX
Tissue enriched
Detected in some
liver:
146.3
FAH
ENSSSCG00000001780
ENSG00000103876
Fumarylacetoacetate hydrolase
Tissue enhanced
Detected in many
adrenal gland:
53.6
liver:
74.4
FAM109A
ENSSSCG00000009832
ENSG00000198324
Family with sequence similarity 109 member A
Tissue enhanced
Detected in all
ovary:
32.3
FAM129A
ENSSSCG00000015567
ENSG00000135842
Protein Niban
Tissue enhanced
Detected in many
male glands:
84.4
salivary gland:
83.6
smooth muscle:
60.1
FAM151A
ENSSSCG00000036649
ENSG00000162391
Family with sequence similarity 151 member A
Tissue enriched
Detected in some
kidney:
50.8
FAM181B
ENSSSCG00000014897
ENSG00000182103
Family with sequence similarity 181 member B
Tissue enriched
Detected in many
brain:
31.5
FAM196B
ENSSSCG00000017010
ENSG00000204767
Family with sequence similarity 196 member B
Tissue enhanced
Detected in many
lymphoid tissue:
22.6
FAM43A
ENSSSCG00000011828
ENSG00000185112
Family with sequence similarity 43 member A
Low tissue specificity
Detected in all
FAM83G
ENSSSCG00000018047
ENSG00000188522
Family with sequence similarity 83 member G
Tissue enhanced
Detected in many
cornea:
18.5
lens:
26.1
FAM84A
ENSSSCG00000008664
ENSG00000162981
Family with sequence similarity 84 member A
Tissue enhanced
Detected in many
endometrium:
83.8
epididymis:
49.4
thyroid gland:
73.1
FAT2
ENSSSCG00000017084
ENSG00000086570
FAT atypical cadherin 2
Tissue enriched
Detected in many
brain:
98.8
FBLN2
ENSSSCG00000011609
ENSG00000163520
Fibulin 2
Tissue enhanced
Detected in all
mesothelial tissue:
88.7
FBLN7
ENSSSCG00000008101
ENSG00000144152
Fibulin 7
Tissue enriched
Detected in many
cartilage:
150.7
FBN1
ENSSSCG00000004658
ENSG00000166147
Fibrillin-1 precursor
Tissue enhanced
Detected in many
mesothelial tissue:
106.5
FBP1
ENSSSCG00000031174
ENSG00000165140
Fructose-1,6-bisphosphatase 1
Tissue enhanced
Detected in all
kidney:
61.0
liver:
48.3
FCER1G
ENSSSCG00000006357
ENSG00000158869
High affinity immunoglobulin epsilon receptor subunit gamma
Tissue enhanced
Detected in many
bone marrow:
72.1
lymphoid tissue:
92.3
synovial tissue:
75.2
FERMT1
ENSSSCG00000007052
ENSG00000101311
Fermitin family member 1
Low tissue specificity
Detected in many
FGF1
ENSSSCG00000024954
ENSG00000113578
Fibroblast growth factor 1
Tissue enhanced
Detected in many
brain:
37.4
heart:
22.8
lens:
33.4
pineal gland:
28.4
FGF13
ENSSSCG00000022331
ENSG00000129682
Fibroblast growth factor 13
Tissue enhanced
Detected in many
brain:
47.1
FGFR3
ENSSSCG00000030827
ENSG00000068078
Fibroblast growth factor receptor 3
Tissue enhanced
Detected in many
lens:
40.2
male glands:
41.9
FGFR4
ENSSSCG00000014047
ENSG00000160867
Fibroblast growth factor receptor 4
Tissue enhanced
Detected in many
gallbladder:
25.1
liver:
32.3
lymphoid tissue:
24.0
FGFRL1
ENSSSCG00000036512
ENSG00000127418
Fibroblast growth factor receptor like 1
Tissue enhanced
Detected in many
cartilage:
42.6
liver:
52.5
male glands:
35.3
FMO1
ENSSSCG00000015268
ENSG00000010932
Dimethylaniline monooxygenase [N-oxide-forming] 1
Tissue enriched
Detected in many
liver:
195.8
FN1
ENSSSCG00000016174
ENSG00000115414
Fibronectin 1
Tissue enhanced
Detected in many
adipose tissue:
168.3
male glands:
433.9
synovial tissue:
420.5
FNDC1
ENSSSCG00000004052
ENSG00000164694
Fibronectin type III domain containing 1
Tissue enhanced
Detected in many
dura mater:
58.1
mesothelial tissue:
57.0
synovial tissue:
45.8
FOLH1B
ENSSSCG00000027093
ENSG00000086205
Glutamate carboxypeptidase 2
Tissue enhanced
Detected in many
brain:
60.3
lens:
40.1
FOLR2
ENSSSCG00000014812
ENSG00000165457
Folate receptor 2 precursor
Tissue enhanced
Detected in many
cartilage:
59.1
liver:
94.8
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