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Gene name
Human disease related genes
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External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
Class
Cancers
Cardiovascular diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
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RELEASE HISTORY
1362 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000006418
Tissue enhanced
Detected in all
lymphoid tissue:
79.0
na
ENSSSCG00000006919
Tissue enhanced
Detected in all
large intestine:
23.8
lymphoid tissue:
28.1
small intestine:
30.5
stomach:
24.3
na
ENSSSCG00000006963
Tissue enriched
Detected in many
brain:
48.2
na
ENSSSCG00000007001
Tissue enriched
Detected in many
testis:
92.8
na
ENSSSCG00000007178
Low tissue specificity
Detected in all
na
ENSSSCG00000007728
ENSG00000185274
Tissue enhanced
Detected in many
brain:
33.7
cornea:
40.9
vagus nerve:
25.4
na
ENSSSCG00000008855
Tissue enhanced
Detected in many
brain:
12.6
pineal gland:
13.3
retina:
27.3
na
ENSSSCG00000008954
Tissue enhanced
Detected in many
cartilage:
86.3
liver:
86.3
na
ENSSSCG00000009060
ENSG00000196782
Tissue enhanced
Detected in all
male glands:
35.4
na
ENSSSCG00000009172
ENSG00000138814
Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform
Group enriched
Detected in all
brain:
93.4
cartilage:
51.5
na
ENSSSCG00000009213
ENSG00000118777
Low tissue specificity
Detected in many
na
ENSSSCG00000009250
Group enriched
Detected in some
large intestine:
33.2
small intestine:
33.9
na
ENSSSCG00000009489
Tissue enriched
Detected in many
cartilage:
170.3
na
ENSSSCG00000009633
Low tissue specificity
Detected in all
na
ENSSSCG00000009953
ENSG00000197077
Low tissue specificity
Detected in all
na
ENSSSCG00000010370
ENSG00000264230
Annexin A8
Tissue enhanced
Detected in many
cartilage:
88.9
cornea:
140.2
mesothelial tissue:
67.1
na
ENSSSCG00000010497
ENSG00000138185
Ectonucleoside triphosphate diphosphohydrolase 1
Low tissue specificity
Detected in all
na
ENSSSCG00000010546
Cytochrome P450 2C33
Tissue enhanced
Detected in some
cartilage:
96.1
epididymis:
86.8
kidney:
142.2
liver:
421.6
na
ENSSSCG00000010549
Tissue enhanced
Detected in some
cartilage:
57.9
epididymis:
96.8
kidney:
86.4
liver:
191.1
na
ENSSSCG00000010893
ENSG00000000971
Complement factor H precursor
Tissue enhanced
Detected in many
liver:
146.5
synovial tissue:
73.4
na
ENSSSCG00000012014
Protein BTG3
Tissue enhanced
Detected in many
cartilage:
44.7
na
ENSSSCG00000012101
ENSG00000011201
Tissue enriched
Detected in some
cartilage:
69.6
na
ENSSSCG00000012126
Tissue enhanced
Detected in many
brain:
107.7
vagus nerve:
58.1
na
ENSSSCG00000012202
Glycerol kinase
Tissue enhanced
Detected in all
kidney:
59.5
na
ENSSSCG00000012557
ENSG00000198088
Tissue enhanced
Detected in many
pituitary gland:
21.1
testis:
16.6
na
ENSSSCG00000012832
ENSG00000101825
Tissue enhanced
Detected in many
cartilage:
89.1
na
ENSSSCG00000013922
Tissue enriched
Detected in many
brain:
47.7
na
ENSSSCG00000014178
Tissue enhanced
Detected in many
cartilage:
15.0
na
ENSSSCG00000014314
Tissue enhanced
Detected in many
cartilage:
23.9
na
ENSSSCG00000014351
ENSG00000249751
Low tissue specificity
Detected in all
na
ENSSSCG00000014565
Tissue enriched
Detected in many
large intestine:
217.4
na
ENSSSCG00000014996
Tissue enhanced
Detected in many
epididymis:
23.0
na
ENSSSCG00000015405
ENSG00000135218
Platelet glycoprotein 4
Tissue enhanced
Detected in many
adipose tissue:
146.7
aorta:
64.1
heart:
72.5
skeletal muscle:
63.1
na
ENSSSCG00000015774
Tissue enhanced
Detected in many
lens:
49.4
na
ENSSSCG00000016006
Tissue enhanced
Detected in many
cartilage:
108.6
male glands:
128.8
na
ENSSSCG00000016215
Tissue enhanced
Detected in many
brain:
29.1
skeletal muscle:
40.2
na
ENSSSCG00000016263
Tissue enhanced
Detected in many
lymphoid tissue:
53.4
na
ENSSSCG00000016401
Tissue enhanced
Detected in many
brain:
52.0
lens:
49.6
vagus nerve:
41.2
na
ENSSSCG00000016548
ENSG00000128567
Low tissue specificity
Detected in all
na
ENSSSCG00000016685
ENSG00000122574
Tissue enhanced
Detected in many
brain:
62.4
male glands:
43.3
skeletal muscle:
34.1
na
ENSSSCG00000016806
Tissue enhanced
Detected in many
brain:
27.3
choroid plexus:
30.3
na
ENSSSCG00000016823
ENSG00000082196
Complement C1q tumor necrosis factor-related protein 3 precursor
Tissue enhanced
Detected in all
cornea:
58.4
smooth muscle:
46.9
na
ENSSSCG00000016868
ENSG00000177721
Tissue enhanced
Detected in all
ovary:
24.2
na
ENSSSCG00000017324
Tissue enhanced
Detected in many
cartilage:
13.6
epididymis:
9.6
testis:
33.6
na
ENSSSCG00000017754
ENSG00000168961,ENSG00000170298,ENSG00000171916
Galectin-9 isoform 5
Tissue enhanced
Detected in many
small intestine:
65.6
stomach:
86.5
na
ENSSSCG00000018026
ENSG00000171931
Tissue enhanced
Detected in many
testis:
60.6
na
ENSSSCG00000020725
ENSG00000065361
Tissue enhanced
Detected in many
liver:
49.6
vagus nerve:
57.8
na
ENSSSCG00000020872
ENSG00000162366
Tissue enriched
Detected in many
kidney:
160.6
na
ENSSSCG00000021414
Low tissue specificity
Detected in all
na
ENSSSCG00000021623
Low tissue specificity
Detected in all
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