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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
Cardiovascular diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
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16
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
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Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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765 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000037238
ENSG00000161692
Tissue enhanced
Detected in many
lymphoid tissue:
16.8
testis:
15.6
na
ENSSSCG00000037330
Low tissue specificity
Detected in many
na
ENSSSCG00000037567
Tissue enhanced
Detected in many
aorta:
55.2
heart:
65.1
skeletal muscle:
55.1
na
ENSSSCG00000037735
ENSG00000182782,ENSG00000255398
Tissue enhanced
Detected in many
cornea:
51.2
upper respiratory system:
14.3
na
ENSSSCG00000037927
Tissue enhanced
Detected in many
lung:
15.2
small intestine:
17.4
stomach:
13.1
upper respiratory system:
20.4
na
ENSSSCG00000037929
ENSG00000124635
Tissue enhanced
Detected in many
lymphoid tissue:
59.9
upper respiratory system:
34.1
na
ENSSSCG00000037947
Low tissue specificity
Detected in many
na
ENSSSCG00000037949
Tissue enhanced
Detected in many
lymphoid tissue:
39.5
upper respiratory system:
19.9
na
ENSSSCG00000038322
Tissue enhanced
Detected in many
adipose tissue:
64.0
aorta:
46.9
bone marrow:
38.0
mesothelial tissue:
20.7
na
ENSSSCG00000038683
Group enriched
Detected in some
fallopian tube:
21.4
skin:
9.4
testis:
13.4
upper respiratory system:
7.3
na
ENSSSCG00000038945
Tissue enhanced
Detected in many
lymphoid tissue:
20.0
upper respiratory system:
21.4
na
ENSSSCG00000039009
Tissue enhanced
Detected in many
smooth muscle:
107.2
na
ENSSSCG00000039107
Tissue enhanced
Detected in many
lymphoid tissue:
26.4
testis:
25.8
na
ENSSSCG00000039108
Group enriched
Detected in all
pineal gland:
146.9
retina:
90.5
na
ENSSSCG00000039222
ENSG00000176788
Tissue enriched
Detected in many
lens:
666.9
na
ENSSSCG00000039364
ENSG00000183098
Tissue enriched
Detected in many
cartilage:
185.3
na
ENSSSCG00000039370
ENSG00000188610,ENSG00000196550,ENSG00000215784,ENSG00000263513
Tissue enhanced
Detected in many
lymphoid tissue:
14.8
upper respiratory system:
10.0
na
ENSSSCG00000039405
Tissue enhanced
Detected in many
stomach:
18.3
upper respiratory system:
24.0
na
ENSSSCG00000039430
Tissue enhanced
Detected in all
thyroid gland:
72.8
na
ENSSSCG00000039526
ENSG00000196890
Tissue enhanced
Detected in many
lymphoid tissue:
37.7
upper respiratory system:
18.6
na
ENSSSCG00000039615
ENSG00000203812,ENSG00000272196
Tissue enhanced
Detected in all
lymphoid tissue:
189.5
na
ENSSSCG00000039723
Tissue enhanced
Detected in many
lens:
47.5
male glands:
41.4
na
ENSSSCG00000040074
Tissue enhanced
Detected in many
brain:
68.0
male glands:
52.6
salivary gland:
31.0
na
ENSSSCG00000040239
Group enriched
Detected in many
kidney:
27.2
thyroid gland:
54.1
na
ENSSSCG00000040554
ENSG00000092758
Tissue enriched
Detected in some
cartilage:
366.1
na
ENSSSCG00000040592
Tissue enriched
Detected in some
upper respiratory system:
3262.8
na
ENSSSCG00000040831
Tissue enhanced
Detected in many
liver:
141.4
na
ENSSSCG00000040907
Tissue enhanced
Detected in all
esophagus:
66.3
small intestine:
43.2
na
ENSSSCG00000040948
Tissue enhanced
Detected in some
fallopian tube:
35.8
testis:
17.5
upper respiratory system:
10.2
NAPSA
ENSSSCG00000003212
ENSG00000131400
Napsin A aspartic peptidase
Tissue enhanced
Detected in many
lung:
42.0
lymphoid tissue:
15.9
NCBP2-AS2
ENSSSCG00000038542
ENSG00000270170
NCBP2 antisense RNA 2 (head to head)
Low tissue specificity
Detected in many
NCMAP
ENSSSCG00000003547
ENSG00000184454
Non-compact myelin associated protein
Group enriched
Detected in many
brain:
125.9
vagus nerve:
202.2
NDC1
ENSSSCG00000028748
ENSG00000058804
NDC1 transmembrane nucleoporin
Low tissue specificity
Detected in all
NDRG2
ENSSSCG00000030309
ENSG00000165795
Protein NDRG2
Tissue enhanced
Detected in many
brain:
98.4
NGFR
ENSSSCG00000017548
ENSG00000064300
Nerve growth factor receptor
Tissue enhanced
Detected in many
vagus nerve:
28.9
NKD1
ENSSSCG00000039875
ENSG00000140807
Naked cuticle homolog 1
Low tissue specificity
Detected in many
NKX3-1
ENSSSCG00000031924
ENSG00000167034
NK3 homeobox 1
Tissue enriched
Detected in some
male glands:
206.7
NKX6-1
ENSSSCG00000009232
ENSG00000163623
NK6 homeobox 1
Tissue enhanced
Detected in some
brain:
11.8
mouth:
7.0
upper respiratory system:
23.9
NPR1
ENSSSCG00000006572
ENSG00000169418
Natriuretic peptide receptor 1
Tissue enhanced
Detected in many
adipose tissue:
45.7
aorta:
28.4
mesothelial tissue:
26.9
NPSR1
ENSSSCG00000016664
ENSG00000187258
Neuropeptide S receptor 1
Low tissue specificity
Detected in many
NQO1
ENSSSCG00000002754
ENSG00000181019
NAD(P)H dehydrogenase
Tissue enhanced
Detected in many
cornea:
151.7
lens:
43.5
NR4A1
ENSSSCG00000031321
ENSG00000123358
Nuclear receptor subfamily 4 group A member 1
Tissue enhanced
Detected in many
cartilage:
138.9
NR4A2
ENSSSCG00000015871
ENSG00000153234
Nuclear receptor subfamily 4 group A member 2
Tissue enhanced
Detected in many
cartilage:
110.4
male glands:
119.9
vagus nerve:
70.0
NR4A3
ENSSSCG00000005385
ENSG00000119508
Nuclear receptor subfamily 4 group A member 3
Tissue enhanced
Detected in many
heart:
83.4
male glands:
171.7
NRIP3
ENSSSCG00000014570
ENSG00000175352
Nuclear receptor interacting protein 3
Tissue enhanced
Detected in many
brain:
28.4
salivary gland:
14.1
NRP2
ENSSSCG00000026383
ENSG00000118257
Neuropilin 2
Tissue enhanced
Detected in many
smooth muscle:
71.2
NTN5
ENSSSCG00000003146
ENSG00000142233
Netrin 5
Tissue enhanced
Detected in many
male glands:
37.7
NUF2
ENSSSCG00000006333
ENSG00000143228
NUF2, NDC80 kinetochore complex component
Tissue enhanced
Detected in many
lymphoid tissue:
22.2
NXPH2
ENSSSCG00000040715
ENSG00000144227
Neurexophilin 2
Tissue enhanced
Detected in many
brain:
10.7
male glands:
16.3
salivary gland:
10.6
upper respiratory system:
9.4
NXPH3
ENSSSCG00000017552
ENSG00000182575
Neurexophilin 3
Group enriched
Detected in many
brain:
33.1
cervix:
29.4
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