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Keyword
Chromosome
1
2
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7
8
9
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12
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MT
Unmapped
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Stomach 1
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Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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3143 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
ITPRIP
ENSSSCG00000010613
ENSG00000148841
Inositol 1,4,5-trisphosphate receptor interacting protein
Tissue enhanced
Detected in many
lymphoid tissue:
39.1
ITSN1
ENSSSCG00000024614
ENSG00000205726
Intersectin 1
Low tissue specificity
Detected in all
IVL
ENSSSCG00000006595
ENSG00000163207
Involucrin
Group enriched
Detected in some
mouth:
120.0
skin:
90.2
JADE3
ENSSSCG00000012267
ENSG00000102221
Jade family PHD finger 3
Low tissue specificity
Detected in all
JAG1
ENSSSCG00000007067
ENSG00000101384
Jagged 1
Low tissue specificity
Detected in all
JAKMIP1
ENSSSCG00000008710
ENSG00000152969
Janus kinase and microtubule interacting protein 1
Tissue enhanced
Detected in many
brain:
21.1
stomach:
12.5
JAM2
ENSSSCG00000023028
ENSG00000154721
Junctional adhesion molecule 2
Tissue enhanced
Detected in all
brain:
42.6
dura mater:
46.8
JAZF1
ENSSSCG00000016691
ENSG00000153814
JAZF zinc finger 1
Tissue enhanced
Detected in many
lens:
89.3
JCHAIN
ENSSSCG00000035379
ENSG00000132465
Joining chain of multimeric IgA and IgM
Tissue enhanced
Detected in many
large intestine:
159.0
small intestine:
181.6
upper respiratory system:
488.5
JDP2
ENSSSCG00000035895
ENSG00000140044
Jun dimerization protein 2
Low tissue specificity
Detected in many
JUNB
ENSSSCG00000013735
ENSG00000171223
JunB proto-oncogene, AP-1 transcription factor subunit
Tissue enhanced
Detected in many
synovial tissue:
110.7
JUP
ENSSSCG00000017428
ENSG00000173801
Junction plakoglobin
Low tissue specificity
Detected in all
KANK1
ENSSSCG00000005235
ENSG00000107104
KN motif and ankyrin repeat domains 1
Low tissue specificity
Detected in all
KANK2
ENSSSCG00000039194
ENSG00000197256
KN motif and ankyrin repeat domains 2
Low tissue specificity
Detected in all
KANK3
ENSSSCG00000013598
ENSG00000186994
KN motif and ankyrin repeat domains 3
Tissue enhanced
Detected in many
penis:
34.9
KAZALD1
ENSSSCG00000022429
ENSG00000107821
Kazal-type serine protease inhibitor domain-containing protein 1 precursor
Tissue enhanced
Detected in all
bone marrow:
32.0
lymphoid tissue:
34.8
KCNA1
ENSSSCG00000000716
ENSG00000111262
Potassium voltage-gated channel subfamily A member 1
Group enriched
Detected in some
adrenal gland:
64.8
brain:
42.6
KCNB1
ENSSSCG00000007462
ENSG00000158445
Potassium voltage-gated channel subfamily B member 1
Tissue enriched
Detected in many
retina:
78.5
KCNH2
ENSSSCG00000016448
ENSG00000055118
Potassium voltage-gated channel subfamily H member 2
Tissue enhanced
Detected in many
heart:
30.8
KCNK5
ENSSSCG00000025423
ENSG00000164626
Potassium two pore domain channel subfamily K member 5
Tissue enhanced
Detected in many
cartilage:
29.6
kidney:
24.7
KCNMA1
ENSSSCG00000010325
ENSG00000156113
Calcium-activated potassium channel subunit alpha-1
Tissue enhanced
Detected in many
cervix:
87.5
pineal gland:
73.5
smooth muscle:
70.9
KCNMB1
ENSSSCG00000017005
ENSG00000145936
Potassium calcium-activated channel subfamily M regulatory beta subunit 1
Tissue enhanced
Detected in many
ductus deferens:
58.9
smooth muscle:
109.2
KCNMB3
ENSSSCG00000029240
ENSG00000171121
Potassium calcium-activated channel subfamily M regulatory beta subunit 3
Tissue enhanced
Detected in many
lymphoid tissue:
16.0
KCNN3
ENSSSCG00000006542
ENSG00000143603
Small conductance calcium-activated potassium channel protein 3
Tissue enhanced
Detected in many
penis:
52.7
smooth muscle:
52.1
KCNQ4
ENSSSCG00000003975
ENSG00000117013
Potassium voltage-gated channel subfamily Q member 4
Tissue enhanced
Detected in many
skeletal muscle:
24.0
KCNS3
ENSSSCG00000031905
ENSG00000170745
Potassium voltage-gated channel subfamily S member 3
Tissue enhanced
Detected in many
brain:
15.7
gallbladder:
17.2
urinary bladder:
14.7
KCNT2
ENSSSCG00000010892
ENSG00000162687
Potassium sodium-activated channel subfamily T member 2
Tissue enhanced
Detected in many
brain:
24.0
heart:
12.7
pituitary gland:
17.4
KCP
ENSSSCG00000016574
ENSG00000135253
Kielin/chordin-like protein
Tissue enhanced
Detected in many
epididymis:
63.0
kidney:
41.0
lymphoid tissue:
27.9
KCTD17
ENSSSCG00000000135
ENSG00000100379
Potassium channel tetramerization domain containing 17
Tissue enhanced
Detected in many
brain:
47.4
stomach:
34.6
KCTD7
ENSSSCG00000040985
ENSG00000243335
Potassium channel tetramerization domain containing 7
Tissue enhanced
Detected in all
brain:
37.1
epididymis:
44.2
male glands:
49.0
KDM6B
ENSSSCG00000017962
ENSG00000132510
Lysine demethylase 6B
Low tissue specificity
Detected in all
KDR
ENSSSCG00000008844
ENSG00000128052
Kinase insert domain receptor
Low tissue specificity
Detected in many
KERA
ENSSSCG00000000917
ENSG00000139330
Keratocan
Tissue enriched
Detected in many
cornea:
288.6
KHDRBS3
ENSSSCG00000005941
ENSG00000131773
KH RNA binding domain containing, signal transduction associated 3
Group enriched
Detected in many
brain:
38.0
testis:
45.1
KIAA0895
ENSSSCG00000016659
ENSG00000164542
KIAA0895
Tissue enhanced
Detected in many
testis:
31.2
KIAA1147
ENSSSCG00000016491
ENSG00000257093
KIAA1147
Tissue enhanced
Detected in all
lens:
37.3
KIAA1211L
ENSSSCG00000008187
ENSG00000196872
KIAA1211 like
Tissue enhanced
Detected in many
brain:
34.1
lymphoid tissue:
26.4
KIAA1324
ENSSSCG00000006836
ENSG00000116299
KIAA1324
Tissue enhanced
Detected in many
male glands:
100.4
pituitary gland:
104.7
salivary gland:
32.1
KIAA1614
ENSSSCG00000015538
ENSG00000135835
KIAA1614
Low tissue specificity
Detected in many
KIAA1755
ENSSSCG00000007344
ENSG00000149633
KIAA1755
Tissue enhanced
Detected in many
dura mater:
21.7
smooth muscle:
25.2
KIAA1958
ENSSSCG00000005469
ENSG00000165185
KIAA1958
Tissue enhanced
Detected in all
retina:
51.1
KIF11
ENSSSCG00000010471
ENSG00000138160
Kinesin family member 11
Tissue enhanced
Detected in many
lymphoid tissue:
33.9
KIF14
ENSSSCG00000010912
ENSG00000118193
Kinesin family member 14
Tissue enhanced
Detected in many
lymphoid tissue:
17.3
testis:
19.9
KIF15
ENSSSCG00000011309
ENSG00000163808
Kinesin family member 15
Group enriched
Detected in all
lymphoid tissue:
17.1
testis:
66.4
KIF18A
ENSSSCG00000013332
ENSG00000121621
Kinesin family member 18A
Tissue enhanced
Detected in many
lymphoid tissue:
20.2
testis:
14.2
KIF18B
ENSSSCG00000017342
ENSG00000186185
Kinesin family member 18B
Tissue enhanced
Detected in many
lymphoid tissue:
26.5
stomach:
13.5
KIF20A
ENSSSCG00000014326
ENSG00000112984
Kinesin family member 20A
Tissue enhanced
Detected in many
lymphoid tissue:
19.4
KIF22
ENSSSCG00000029509
ENSG00000079616
Kinesin-like protein KIF22
Tissue enhanced
Detected in all
lymphoid tissue:
26.9
KIF23
ENSSSCG00000004969
ENSG00000137807
Kinesin family member 23
Tissue enhanced
Detected in all
fallopian tube:
28.6
KIF24
ENSSSCG00000010984
ENSG00000186638
Kinesin family member 24
Tissue enhanced
Detected in many
upper respiratory system:
13.8
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