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Human disease related genes
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Keyword
Chromosome
1
2
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5
6
7
8
9
10
11
12
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14
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Lymphoid tissue
Male glands
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Mouth
Skin
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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3143 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
DISC1
ENSSSCG00000010170
ENSG00000162946
Disrupted in schizophrenia 1
Tissue enhanced
Detected in all
lens:
47.8
DIXDC1
ENSSSCG00000015036
ENSG00000150764
DIX domain containing 1
Tissue enhanced
Detected in all
brain:
43.0
lens:
38.7
DKK2
ENSSSCG00000032094
ENSG00000155011
Dickkopf WNT signaling pathway inhibitor 2
Tissue enhanced
Detected in many
cornea:
29.4
ovary:
44.1
DKK3
ENSSSCG00000013401
ENSG00000050165
Dickkopf-related protein 3 precursor
Tissue enhanced
Detected in many
heart:
96.2
ovary:
101.1
DLC1
ENSSSCG00000006970
ENSG00000164741
DLC1 Rho GTPase activating protein
Low tissue specificity
Detected in many
DLG4
ENSSSCG00000024285
ENSG00000132535
Discs large MAGUK scaffold protein 4
Tissue enhanced
Detected in all
brain:
59.7
pineal gland:
35.1
retina:
43.1
DLK2
ENSSSCG00000001682
ENSG00000171462
Protein delta homolog 2
Tissue enhanced
Detected in many
esophagus:
16.7
male glands:
13.9
mouth:
26.2
skin:
14.7
DLL1
ENSSSCG00000027726
ENSG00000198719
Delta like canonical Notch ligand 1
Tissue enhanced
Detected in many
lymphoid tissue:
38.3
DMBT1
ENSSSCG00000002981
ENSG00000187908
Deleted in malignant brain tumors 1 protein precursor
Tissue enriched
Detected in some
upper respiratory system:
534.4
DMD
ENSSSCG00000028148
ENSG00000198947
Dystrophin
Tissue enhanced
Detected in many
skeletal muscle:
82.6
vagus nerve:
69.3
DMPK
ENSSSCG00000038969
ENSG00000104936
DM1 protein kinase
Tissue enhanced
Detected in all
smooth muscle:
96.2
DMXL2
ENSSSCG00000032517
ENSG00000104093
Dmx like 2
Tissue enhanced
Detected in many
brain:
26.6
pineal gland:
29.3
DNAJB5
ENSSSCG00000005297
ENSG00000137094
DnaJ heat shock protein family (Hsp40) member B5
Tissue enhanced
Detected in all
skeletal muscle:
53.5
smooth muscle:
76.7
DNAJC22
ENSSSCG00000000198
ENSG00000178401
DnaJ heat shock protein family (Hsp40) member C22
Tissue enhanced
Detected in many
liver:
31.2
male glands:
31.4
DNASE1L1
ENSSSCG00000037032
ENSG00000013563
Deoxyribonuclease-1-like 1 precursor
Low tissue specificity
Detected in many
DNASE1L3
ENSSSCG00000032019
ENSG00000163687
Deoxyribonuclease 1 like 3
Tissue enhanced
Detected in many
lymphoid tissue:
23.3
DNASE2
ENSSSCG00000013731
ENSG00000105612
Deoxyribonuclease-2-alpha precursor
Low tissue specificity
Detected in all
DNER
ENSSSCG00000016258
ENSG00000187957
Delta/notch like EGF repeat containing
Tissue enhanced
Detected in many
brain:
46.6
pineal gland:
19.8
pituitary gland:
24.7
DNM1
ENSSSCG00000005641
ENSG00000106976
Dynamin 1
Tissue enhanced
Detected in many
brain:
73.2
cartilage:
41.6
DNM3
ENSSSCG00000038958
ENSG00000197959
Dynamin 3
Tissue enhanced
Detected in many
brain:
51.4
cartilage:
44.9
DNMBP
ENSSSCG00000010544
ENSG00000107554
Dynamin binding protein
Tissue enriched
Detected in all
lens:
96.5
DNTT
ENSSSCG00000010505
ENSG00000107447
DNA nucleotidylexotransferase
Tissue enriched
Detected in single
lymphoid tissue:
73.3
DOC2B
ENSSSCG00000039412
ENSG00000272636
Double C2 domain beta
Tissue enhanced
Detected in many
brain:
33.7
cartilage:
67.2
DOCK1
ENSSSCG00000035045
ENSG00000150760
Dedicator of cytokinesis 1
Low tissue specificity
Detected in all
DOCK4
ENSSSCG00000025602
ENSG00000128512
Dedicator of cytokinesis 4
Tissue enhanced
Detected in all
brain:
47.0
DOCK6
ENSSSCG00000038604
ENSG00000130158
Dedicator of cytokinesis 6
Low tissue specificity
Detected in many
DOCK7
ENSSSCG00000003818
ENSG00000116641
Dedicator of cytokinesis 7
Low tissue specificity
Detected in all
DOK3
ENSSSCG00000031653
ENSG00000146094
Docking protein 3
Tissue enhanced
Detected in many
lymphoid tissue:
30.5
DOK6
ENSSSCG00000028977
ENSG00000206052
Docking protein 6
Tissue enhanced
Detected in many
brain:
42.3
retina:
19.0
DPEP2
ENSSSCG00000021105
ENSG00000167261
Dipeptidase 2
Tissue enhanced
Detected in many
fallopian tube:
37.2
lung:
14.5
upper respiratory system:
24.9
DPYSL3
ENSSSCG00000036549
ENSG00000113657
Dihydropyrimidinase like 3
Low tissue specificity
Detected in many
DRAM2
ENSSSCG00000026922
ENSG00000156171
DNA damage-regulated autophagy modulator protein 2
Low tissue specificity
Detected in all
DRC7
ENSSSCG00000002817
ENSG00000159625
Dynein regulatory complex subunit 7
Tissue enhanced
Detected in some
fallopian tube:
28.6
lung:
19.0
testis:
21.3
upper respiratory system:
26.9
DSC3
ENSSSCG00000024800
ENSG00000134762
Desmocollin 3
Tissue enhanced
Detected in many
cornea:
77.5
mouth:
100.5
skin:
50.9
DSEL
ENSSSCG00000035941
ENSG00000171451
Dermatan sulfate epimerase-like
Tissue enhanced
Detected in many
pituitary gland:
37.4
thyroid gland:
28.7
DSG3
ENSSSCG00000027160
ENSG00000134757
Desmoglein 3
Group enriched
Detected in many
cornea:
35.0
esophagus:
18.7
mouth:
66.6
skin:
41.8
DST
ENSSSCG00000001499
ENSG00000151914
Dystonin
Low tissue specificity
Detected in all
DTL
ENSSSCG00000015600
ENSG00000143476
Denticleless E3 ubiquitin protein ligase homolog
Tissue enhanced
Detected in many
lymphoid tissue:
17.4
testis:
27.6
DTNA
ENSSSCG00000028047
ENSG00000134769
Dystrobrevin alpha
Tissue enhanced
Detected in many
lens:
51.0
skeletal muscle:
55.0
DTX1
ENSSSCG00000009873
ENSG00000135144
Deltex E3 ubiquitin ligase 1
Low tissue specificity
Detected in many
DTX4
ENSSSCG00000013145
ENSG00000110042
Deltex E3 ubiquitin ligase 4
Low tissue specificity
Detected in many
DUOX2
ENSSSCG00000004678
ENSG00000140279
Dual oxidase 2 precursor
Group enriched
Detected in many
gallbladder:
21.4
large intestine:
37.0
stomach:
52.0
thyroid gland:
72.5
upper respiratory system:
24.4
DUOXA1
ENSSSCG00000004677
ENSG00000140254
Dual oxidase maturation factor 1
Tissue enhanced
Detected in many
mouth:
24.3
stomach:
29.6
thyroid gland:
46.7
DUSP1
ENSSSCG00000016991
ENSG00000120129
Dual specificity protein phosphatase 1
Tissue enhanced
Detected in all
male glands:
173.1
DUSP10
ENSSSCG00000010831
ENSG00000143507
Dual specificity phosphatase 10
Low tissue specificity
Detected in many
DUSP3
ENSSSCG00000020744
ENSG00000108861
Dual specificity phosphatase 3
Low tissue specificity
Detected in all
DUSP4
ENSSSCG00000015850
ENSG00000120875
Dual specificity phosphatase 4
Tissue enhanced
Detected in many
ovary:
53.6
DVL3
ENSSSCG00000025374
ENSG00000161202
Dishevelled segment polarity protein 3
Low tissue specificity
Detected in all
DYNC1I1
ENSSSCG00000015335
ENSG00000158560
Dynein cytoplasmic 1 intermediate chain 1
Group enriched
Detected in many
brain:
30.5
lens:
119.7
DYRK3
ENSSSCG00000015649
ENSG00000143479
Dual specificity tyrosine phosphorylation regulated kinase 3
Tissue enhanced
Detected in all
lens:
49.1
testis:
37.9
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