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Human disease related genes
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Keyword
Chromosome
1
2
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7
8
9
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MT
Unmapped
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Stomach 1
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Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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4635 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
CTNNA3
ENSSSCG00000036480
ENSG00000183230
Catenin alpha 3
Tissue enhanced
Detected in many
brain:
44.7
heart:
32.8
vagus nerve:
22.2
CTNS
ENSSSCG00000017865
ENSG00000040531
Cystinosin, lysosomal cystine transporter
Tissue enhanced
Detected in all
vagus nerve:
43.2
CTSC
ENSSSCG00000014924
ENSG00000109861
Cathepsin C
Tissue enriched
Detected in many
ovary:
200.8
CTSH
ENSSSCG00000001770
ENSG00000103811
Pro-cathepsin H Cathepsin H mini chain Cathepsin H Cathepsin H heavy chain Cathepsin H light chain
Tissue enhanced
Detected in all
ovary:
77.2
synovial tissue:
85.6
CTSS
ENSSSCG00000006648
ENSG00000163131
Cathepsin S
Tissue enhanced
Detected in many
lymphoid tissue:
65.7
CTSV
ENSSSCG00000011171
ENSG00000136943
Cathepsin L1 Cathepsin L1 heavy chain Cathepsin L1 light chain
Tissue enhanced
Detected in all
cornea:
126.5
liver:
80.8
CTSW
ENSSSCG00000012970
ENSG00000172543
Cathepsin W
Tissue enriched
Detected in many
lymphoid tissue:
70.7
CTSZ
ENSSSCG00000007522
ENSG00000101160
Cathepsin Z precursor
Tissue enhanced
Detected in all
synovial tissue:
77.8
CTTNBP2
ENSSSCG00000016625
ENSG00000077063
Cortactin binding protein 2
Tissue enhanced
Detected in all
kidney:
75.6
CTXN1
ENSSSCG00000036220
ENSG00000178531
Cortexin 1
Tissue enriched
Detected in some
brain:
90.5
CTXN2
ENSSSCG00000040204
ENSG00000233932
Cortexin 2
Group enriched
Detected in some
brain:
11.1
pituitary gland:
4.7
CTXN3
ENSSSCG00000036570
ENSG00000205279
Cortexin 3
Tissue enhanced
Detected in many
brain:
23.1
dura mater:
22.3
pineal gland:
33.0
CX3CL1
ENSSSCG00000024759
ENSG00000006210
C-X3-C motif chemokine ligand 1
Tissue enhanced
Detected in many
brain:
43.8
CX3CR1
ENSSSCG00000024024
ENSG00000168329
C-X3-C motif chemokine receptor 1
Group enriched
Detected in many
brain:
43.4
pineal gland:
12.1
CXCL12
ENSSSCG00000034973
ENSG00000107562
Stromal cell-derived factor 1 precursor
Tissue enhanced
Detected in many
bone marrow:
71.3
lymphoid tissue:
82.7
CXCL14
ENSSSCG00000014310
ENSG00000145824
C-X-C motif chemokine 14 precursor
Tissue enhanced
Detected in many
skin:
100.3
stomach:
67.6
urinary bladder:
72.5
CXCL9
ENSSSCG00000032777
ENSG00000138755
C-X-C motif chemokine 9 precursor
Tissue enhanced
Detected in many
large intestine:
26.7
liver:
29.3
lymphoid tissue:
41.0
CXCR4
ENSSSCG00000039416
ENSG00000121966
C-X-C chemokine receptor type 4
Tissue enhanced
Detected in all
lymphoid tissue:
33.9
ovary:
25.7
CYB561
ENSSSCG00000017297
ENSG00000008283
Cytochrome b561
Tissue enhanced
Detected in many
adrenal gland:
75.2
ovary:
51.7
CYB561D1
ENSSSCG00000006827
ENSG00000174151
Cytochrome b561 family member D1
Tissue enhanced
Detected in all
male glands:
43.6
CYB5R1
ENSSSCG00000010929
ENSG00000159348
Cytochrome b5 reductase 1
Tissue enhanced
Detected in all
heart:
24.6
skeletal muscle:
41.5
CYB5R3
ENSSSCG00000000038
ENSG00000100243
Cytochrome b5 reductase 3
Low tissue specificity
Detected in all
CYBA
ENSSSCG00000031493
ENSG00000051523
Cytochrome b-245 light chain
Low tissue specificity
Detected in all
CYBRD1
ENSSSCG00000025049
ENSG00000071967
Cytochrome b reductase 1
Low tissue specificity
Detected in all
CYGB
ENSSSCG00000017181
ENSG00000161544
Cytoglobin
Low tissue specificity
Detected in many
CYP11A1
ENSSSCG00000025273
ENSG00000140459
Cholesterol side-chain cleavage enzyme, mitochondrial
Group enriched
Detected in some
adrenal gland:
230.0
ovary:
287.1
testis:
79.2
CYP1B1
ENSSSCG00000033844
ENSG00000138061
Cytochrome P450 family 1 subfamily B member 1
Tissue enhanced
Detected in many
dura mater:
50.8
ovary:
77.7
CYP26A1
ENSSSCG00000010475
ENSG00000095596
Cytochrome P450, family 26, subfamily A, polypeptide 1
Tissue enhanced
Detected in some
brain:
10.6
cornea:
10.6
endometrium:
15.5
retina:
6.7
CYP26B1
ENSSSCG00000008311
ENSG00000003137
Cytochrome P450 family 26 subfamily B member 1
Tissue enhanced
Detected in many
cartilage:
68.0
penis:
20.0
skin:
17.6
CYP7B1
ENSSSCG00000022092
ENSG00000172817
Cytochrome P450 family 7 subfamily B member 1
Tissue enhanced
Detected in all
liver:
68.1
CYTB
ENSSSCG00000018094
ENSG00000198727
Cytochrome b (mitochondrion)
Tissue enhanced
Detected in all
heart:
1273.8
CYTH3
ENSSSCG00000034768
ENSG00000008256
Cytohesin 3
Low tissue specificity
Detected in all
CYTH4
ENSSSCG00000000130
ENSG00000100055
Cytohesin-4
Tissue enhanced
Detected in many
lymphoid tissue:
30.0
stomach:
28.7
CYTL1
ENSSSCG00000008725
ENSG00000170891
Cytokine like 1
Tissue enriched
Detected in some
cartilage:
233.6
DAAM2
ENSSSCG00000001595
ENSG00000146122
Dishevelled associated activator of morphogenesis 2
Tissue enhanced
Detected in all
brain:
86.3
DAB2
ENSSSCG00000016857
ENSG00000153071
DAB2, clathrin adaptor protein
Tissue enhanced
Detected in many
epididymis:
99.6
synovial tissue:
92.7
DAB2IP
ENSSSCG00000005524
ENSG00000136848
DAB2 interacting protein
Low tissue specificity
Detected in all
DACH1
ENSSSCG00000009457
ENSG00000276644
Dachshund family transcription factor 1
Low tissue specificity
Detected in many
DACT1
ENSSSCG00000031856
ENSG00000165617
Dishevelled binding antagonist of beta catenin 1
Low tissue specificity
Detected in many
DACT3
ENSSSCG00000022280
ENSG00000197380
Dishevelled binding antagonist of beta catenin 3
Tissue enhanced
Detected in many
smooth muscle:
47.8
DAGLA
ENSSSCG00000013079
ENSG00000134780
Diacylglycerol lipase alpha
Low tissue specificity
Detected in many
DAPK1
ENSSSCG00000010949
ENSG00000196730
Death associated protein kinase 1
Low tissue specificity
Detected in all
DAPK2
ENSSSCG00000021588
ENSG00000035664
Death-associated protein kinase 2
Tissue enhanced
Detected in all
heart:
30.1
DAW1
ENSSSCG00000016255
ENSG00000123977
Dynein assembly factor with WD repeats 1
Tissue enhanced
Detected in some
choroid plexus:
39.1
fallopian tube:
37.7
testis:
56.0
DBH
ENSSSCG00000005742
ENSG00000123454
Dopamine beta-hydroxylase
Tissue enriched
Detected in some
adrenal gland:
96.9
DBI
ENSSSCG00000032213
ENSG00000155368
Acyl-CoA-binding protein DBI(32-86)
Tissue enhanced
Detected in all
brain:
215.4
DBN1
ENSSSCG00000040706
ENSG00000113758
Drebrin 1
Low tissue specificity
Detected in all
DBNDD2
ENSSSCG00000033586
ENSG00000244274
Dysbindin domain-containing protein 2
Tissue enhanced
Detected in all
brain:
94.0
DBP
ENSSSCG00000003148
ENSG00000105516
D-box binding PAR bZIP transcription factor
Low tissue specificity
Detected in all
DBX2
ENSSSCG00000035938
ENSG00000185610
Developing brain homeobox 2
Group enriched
Detected in many
brain:
22.8
cornea:
6.6
pineal gland:
5.7
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