We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
4635 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 93 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
CEP170B
ENSSSCG00000002558
ENSG00000099814
Centrosomal protein 170B
Tissue enhanced
Detected in many
epididymis:
69.4
CERCAM
ENSSSCG00000005650
ENSG00000167123
Cerebral endothelial cell adhesion molecule
Tissue enhanced
Detected in many
cartilage:
38.6
synovial tissue:
37.8
CERKL
ENSSSCG00000016010
ENSG00000188452
Ceramide kinase like
Tissue enhanced
Detected in some
fallopian tube:
15.5
pineal gland:
42.1
retina:
36.9
CERS2
ENSSSCG00000006644
ENSG00000143418
Ceramide synthase 2
Tissue enhanced
Detected in all
brain:
92.5
CERS6
ENSSSCG00000032715
ENSG00000172292
Ceramide synthase 6
Tissue enhanced
Detected in many
lens:
30.5
CFAP126
ENSSSCG00000023957
ENSG00000188931
Cilia and flagella associated protein 126
Tissue enhanced
Detected in all
choroid plexus:
63.1
fallopian tube:
75.7
testis:
53.2
upper respiratory system:
71.6
CFAP161
ENSSSCG00000001786
ENSG00000156206
Cilia- and flagella-associated protein 161
Tissue enhanced
Detected in some
brain:
11.3
choroid plexus:
17.1
fallopian tube:
26.6
lung:
11.6
upper respiratory system:
19.7
CFAP221
ENSSSCG00000015741
ENSG00000163075
Cilia and flagella associated protein 221
Tissue enhanced
Detected in all
fallopian tube:
23.3
testis:
27.9
CFAP46
ENSSSCG00000010768
ENSG00000171811
Cilia and flagella associated protein 46
Tissue enhanced
Detected in many
fallopian tube:
37.6
lung:
31.0
testis:
19.4
CFAP52
ENSSSCG00000017994
ENSG00000166596
Cilia and flagella associated protein 52
Tissue enhanced
Detected in some
brain:
14.0
fallopian tube:
30.1
testis:
30.3
upper respiratory system:
21.2
CFAP54
ENSSSCG00000033574
ENSG00000188596
Cilia and flagella associated protein 54
Tissue enhanced
Detected in many
choroid plexus:
31.6
fallopian tube:
62.8
upper respiratory system:
24.1
CFAP57
ENSSSCG00000023904
ENSG00000243710
Cilia and flagella associated protein 57
Tissue enhanced
Detected in some
fallopian tube:
21.1
lymphoid tissue:
21.4
testis:
15.6
upper respiratory system:
14.8
CFAP61
ENSSSCG00000038858
ENSG00000089101
Cilia and flagella associated protein 61
Tissue enhanced
Detected in some
choroid plexus:
16.5
fallopian tube:
25.0
testis:
41.2
upper respiratory system:
18.9
CFAP65
ENSSSCG00000016203
ENSG00000181378
Cilia and flagella associated protein 65
Group enriched
Detected in some
fallopian tube:
37.0
lung:
20.9
testis:
24.4
upper respiratory system:
27.7
CFAP69
ENSSSCG00000015303
ENSG00000105792
Cilia and flagella associated protein 69
Tissue enhanced
Detected in many
choroid plexus:
19.0
fallopian tube:
34.0
testis:
23.8
CFAP70
ENSSSCG00000010298
ENSG00000156042
Cilia and flagella associated protein 70
Tissue enhanced
Detected in many
fallopian tube:
28.7
testis:
53.2
CFAP73
ENSSSCG00000009875
ENSG00000186710
Cilia and flagella associated protein 73
Tissue enhanced
Detected in some
choroid plexus:
10.2
fallopian tube:
27.9
lung:
12.1
upper respiratory system:
22.7
CFAP74
ENSSSCG00000030513
ENSG00000142609
Cilia and flagella associated protein 74
Tissue enhanced
Detected in many
kidney:
23.9
lung:
25.6
CFAP77
ENSSSCG00000005727
ENSG00000188523
Cilia and flagella associated protein 77
Tissue enhanced
Detected in all
fallopian tube:
26.7
upper respiratory system:
19.9
CFD
ENSSSCG00000013418
ENSG00000197766
Complement factor D
Tissue enhanced
Detected in many
gallbladder:
125.8
small intestine:
98.3
stomach:
122.6
CGA
ENSSSCG00000025434
ENSG00000135346
Glycoprotein hormones alpha chain
Tissue enriched
Detected in some
pituitary gland:
401.1
CGNL1
ENSSSCG00000035038
ENSG00000128849
Cingulin like 1
Tissue enhanced
Detected in many
kidney:
62.8
thyroid gland:
72.5
CH25H
ENSSSCG00000010449
ENSG00000138135
Cholesterol 25-hydroxylase
Tissue enhanced
Detected in many
epididymis:
43.9
ovary:
26.5
CHAD
ENSSSCG00000017569
ENSG00000136457
Chondroadherin
Tissue enriched
Detected in many
cartilage:
273.3
CHADL
ENSSSCG00000000067
ENSG00000100399
Chondroadherin like
Tissue enriched
Detected in some
cartilage:
80.3
CHAF1B
ENSSSCG00000012056
ENSG00000159259
Chromatin assembly factor 1 subunit B
Tissue enhanced
Detected in many
lymphoid tissue:
15.3
CHAT
ENSSSCG00000010392
ENSG00000070748
Choline O-acetyltransferase
Tissue enhanced
Detected in all
brain:
14.4
cornea:
23.6
CHD5
ENSSSCG00000003366
ENSG00000116254
Chromodomain helicase DNA binding protein 5
Tissue enhanced
Detected in many
brain:
26.9
testis:
27.0
CHD7
ENSSSCG00000006231
ENSG00000171316
Chromodomain helicase DNA binding protein 7
Low tissue specificity
Detected in all
CHDH
ENSSSCG00000011456
ENSG00000016391
Choline dehydrogenase
Tissue enhanced
Detected in many
liver:
44.2
CHGA
ENSSSCG00000002456
ENSG00000100604
Chromogranin-A precursor
Tissue enriched
Detected in some
adrenal gland:
301.0
CHGB
ENSSSCG00000039779
ENSG00000089199
Secretogranin-1 precursor
Group enriched
Detected in some
adrenal gland:
150.2
pituitary gland:
276.8
CHI3L1
ENSSSCG00000015476
ENSG00000133048
Chitinase-3-like protein 1 precursor
Group enriched
Detected in some
cartilage:
58.5
lung:
39.6
synovial tissue:
21.1
upper respiratory system:
18.7
CHL1
ENSSSCG00000011524
ENSG00000134121
Cell adhesion molecule L1 like
Tissue enhanced
Detected in many
brain:
47.4
pineal gland:
36.4
vagus nerve:
36.8
CHM
ENSSSCG00000012463
ENSG00000188419
CHM, Rab escort protein 1
Tissue enhanced
Detected in all
lens:
51.9
CHMP4A
ENSSSCG00000033432
ENSG00000254505
Charged multivesicular body protein 4A
Low tissue specificity
Detected in many
CHODL
ENSSSCG00000012018
ENSG00000154645
Chondrolectin
Tissue enhanced
Detected in all
brain:
67.6
CHP2
ENSSSCG00000034827
ENSG00000166869
Calcineurin like EF-hand protein 2
Tissue enhanced
Detected in all
large intestine:
42.1
small intestine:
34.1
CHRD
ENSSSCG00000025270
ENSG00000090539
Chordin
Tissue enriched
Detected in many
liver:
64.9
CHRDL1
ENSSSCG00000012576
ENSG00000101938
Chordin like 1
Tissue enhanced
Detected in many
lens:
58.7
CHRDL2
ENSSSCG00000014843
ENSG00000054938
Chordin like 2
Group enriched
Detected in some
cervix:
147.1
gallbladder:
92.8
CHRM2
ENSSSCG00000032532
ENSG00000181072
Muscarinic acetylcholine receptor M2
Tissue enhanced
Detected in many
gallbladder:
38.1
heart:
22.9
smooth muscle:
24.7
CHRM3
ENSSSCG00000026176
ENSG00000133019
Muscarinic acetylcholine receptor M3
Tissue enhanced
Detected in many
salivary gland:
36.8
smooth muscle:
32.6
CHRM5
ENSSSCG00000036662
ENSG00000184984
Cholinergic receptor muscarinic 5
Tissue enriched
Detected in some
brain:
18.9
CHRNA2
ENSSSCG00000009665
ENSG00000120903
Cholinergic receptor nicotinic alpha 2 subunit
Tissue enhanced
Detected in many
brain:
21.7
liver:
13.8
CHRNA4
ENSSSCG00000039677
ENSG00000101204
Cholinergic receptor nicotinic alpha 4 subunit
Group enriched
Detected in some
adipose tissue:
6.7
brain:
24.4
kidney:
14.7
retina:
12.2
CHRNA5
ENSSSCG00000001751
ENSG00000169684
Cholinergic receptor nicotinic alpha 5 subunit
Tissue enriched
Detected in some
brain:
10.2
CHRNA6
ENSSSCG00000023338
ENSG00000147434
Cholinergic receptor nicotinic alpha 6 subunit
Group enriched
Detected in all
brain:
55.5
retina:
16.6
CHRNB2
ENSSSCG00000006545
ENSG00000160716
Cholinergic receptor nicotinic beta 2 subunit
Group enriched
Detected in some
brain:
23.2
retina:
11.7
CHRNB3
ENSSSCG00000026363
ENSG00000147432
Cholinergic receptor nicotinic beta 3 subunit
Tissue enhanced
Detected in some
brain:
27.4
retina:
15.2
testis:
6.4
« prev
| Page
of 93 |
next »