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Human disease related genes
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Biological process
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Keyword
Chromosome
1
2
3
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5
6
7
8
9
10
11
12
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14
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Lymphoid tissue
Male glands
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Mouth
Skin
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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253 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
A4GNT
ENSSSCG00000022473
ENSG00000118017
Alpha-1,4-N-acetylglucosaminyltransferase
Group enriched
Detected in some
small intestine:
94.3
stomach:
58.4
ABCA12
ENSSSCG00000034282
ENSG00000144452
ATP binding cassette subfamily A member 12
Tissue enhanced
Detected in some
epididymis:
8.7
large intestine:
17.5
skin:
26.0
testis:
6.2
ABCB6
ENSSSCG00000016210
ENSG00000115657
ATP binding cassette subfamily B member 6 (Langereis blood group)
Tissue enhanced
Detected in all
large intestine:
37.4
ADAMDEC1
ENSSSCG00000009645
ENSG00000134028
ADAM like decysin 1
Group enriched
Detected in some
large intestine:
55.7
ovary:
68.6
small intestine:
18.5
ADGRG7
ENSSSCG00000011962
ENSG00000144820
Adhesion G protein-coupled receptor G7
Group enriched
Detected in some
large intestine:
44.8
small intestine:
19.2
ADTRP
ENSSSCG00000001048
ENSG00000111863
Androgen dependent TFPI regulating protein
Tissue enhanced
Detected in some
large intestine:
14.1
liver:
43.4
testis:
18.6
ALG14
ENSSSCG00000006885
ENSG00000172339
ALG14, UDP-N-acetylglucosaminyltransferase subunit
Low tissue specificity
Detected in all
AMN
ENSSSCG00000002524
ENSG00000166126
Amnion associated transmembrane protein
Tissue enriched
Detected in some
kidney:
94.2
ANKS4B
ENSSSCG00000007850
ENSG00000175311
Ankyrin repeat and sterile alpha motif domain containing 4B
Tissue enhanced
Detected in some
large intestine:
27.2
liver:
35.4
male glands:
24.8
small intestine:
28.6
ANXA10
ENSSSCG00000030058
ENSG00000109511
Annexin A10
Tissue enriched
Detected in some
stomach:
84.3
ANXA13
ENSSSCG00000005979
ENSG00000104537
Annexin A13
Group enriched
Detected in all
gallbladder:
60.0
small intestine:
15.8
testis:
21.8
AOC1
ENSSSCG00000016442
ENSG00000002726
Amiloride-sensitive amine oxidase [copper-containing]
Group enriched
Detected in some
kidney:
147.9
large intestine:
49.3
small intestine:
58.7
AQP8
ENSSSCG00000031865
ENSG00000103375
Aquaporin-8
Tissue enhanced
Detected in all
large intestine:
45.0
ARHGAP42
ENSSSCG00000014976
ENSG00000165895
Rho GTPase activating protein 42
Low tissue specificity
Detected in all
ARL14
ENSSSCG00000011734
ENSG00000179674
ADP ribosylation factor like GTPase 14
Tissue enriched
Detected in some
large intestine:
42.9
ASCL2
ENSSSCG00000033507
ENSG00000183734
Achaete-scute homolog 2
Tissue enhanced
Detected in some
cornea:
18.8
large intestine:
9.5
small intestine:
10.7
urinary bladder:
9.3
ATOH1
ENSSSCG00000009196
ENSG00000172238
Atonal bHLH transcription factor 1
Group enriched
Detected in some
large intestine:
46.2
small intestine:
12.4
ATP13A3
ENSSSCG00000011825
ENSG00000133657
ATPase 13A3
Tissue enhanced
Detected in all
vagus nerve:
71.2
ATP4B
ENSSSCG00000009561
ENSG00000186009
Potassium-transporting ATPase subunit beta
Group enriched
Detected in some
heart:
11.8
stomach:
46.9
BAIAP2L2
ENSSSCG00000000111
ENSG00000128298
BAI1 associated protein 2 like 2
Tissue enhanced
Detected in many
epididymis:
25.4
kidney:
40.6
large intestine:
45.5
small intestine:
45.7
BCL2L15
ENSSSCG00000038970
ENSG00000188761
BCL2 like 15
Group enriched
Detected in many
large intestine:
24.0
lung:
8.5
small intestine:
17.5
stomach:
13.3
BEST4
ENSSSCG00000003929
ENSG00000142959
Bestrophin 4
Low tissue specificity
Detected in all
BPI
ENSSSCG00000026605
ENSG00000101425
Bactericidal permeability-increasing protein precursor
Group enriched
Detected in some
large intestine:
105.5
small intestine:
398.5
BRI3BP
ENSSSCG00000032831
ENSG00000184992
BRI3 binding protein
Tissue enhanced
Detected in all
large intestine:
36.4
C11orf86
ENSSSCG00000040729
ENSG00000173237
Chromosome 11 open reading frame 86
Group enriched
Detected in some
large intestine:
41.5
small intestine:
30.0
C5
ENSSSCG00000005512
ENSG00000106804
Complement C5a anaphylatoxin precursor
Group enriched
Detected in some
large intestine:
44.2
liver:
68.9
lung:
41.8
small intestine:
35.3
C6
ENSSSCG00000016861
ENSG00000039537
Complement component C6 precursor
Group enriched
Detected in some
large intestine:
34.7
liver:
124.3
C6orf222
ENSSSCG00000001560
ENSG00000189325
Chromosome 6 open reading frame 222
Low tissue specificity
Detected in all
CA1
ENSSSCG00000040770
ENSG00000133742
Carbonic anhydrase 1
Tissue enriched
Detected in some
large intestine:
179.5
CCDC102B
ENSSSCG00000032084
ENSG00000150636
Coiled-coil domain containing 102B
Tissue enhanced
Detected in some
esophagus:
6.7
lens:
23.4
stomach:
5.0
CCKAR
ENSSSCG00000023501
ENSG00000163394
Cholecystokinin A receptor
Tissue enhanced
Detected in all
gallbladder:
30.0
small intestine:
18.8
CDH17
ENSSSCG00000006106
ENSG00000079112
Cadherin 17
Group enriched
Detected in all
large intestine:
70.1
small intestine:
27.3
stomach:
18.6
CDHR2
ENSSSCG00000014055
ENSG00000074276
Cadherin related family member 2
Group enriched
Detected in some
gallbladder:
17.6
kidney:
22.3
large intestine:
38.2
small intestine:
46.9
CDHR5
ENSSSCG00000012852
ENSG00000099834
Cadherin related family member 5
Group enriched
Detected in some
kidney:
61.8
large intestine:
55.5
small intestine:
93.7
CDX1
ENSSSCG00000014445
ENSG00000113722
Caudal type homeobox 1
Group enriched
Detected in some
large intestine:
68.4
small intestine:
22.1
CDX2
ENSSSCG00000009317
ENSG00000165556
Homeobox protein CDX-2
Group enriched
Detected in some
large intestine:
91.0
small intestine:
38.5
CHP2
ENSSSCG00000034827
ENSG00000166869
Calcineurin like EF-hand protein 2
Tissue enhanced
Detected in all
large intestine:
42.1
small intestine:
34.1
CLDN18
ENSSSCG00000011657
ENSG00000066405
Claudin-18 precursor
Tissue enriched
Detected in some
stomach:
139.2
CLDN2
ENSSSCG00000037234
ENSG00000165376
Claudin-2
Tissue enhanced
Detected in some
choroid plexus:
53.5
gallbladder:
48.1
kidney:
57.6
small intestine:
42.2
stomach:
32.9
CLRN3
ENSSSCG00000010753
ENSG00000180745
Clarin 3
Tissue enhanced
Detected in many
kidney:
21.1
large intestine:
34.6
small intestine:
28.1
COL6A5
ENSSSCG00000011186
ENSG00000172752
Collagen type VI alpha 5 chain
Tissue enhanced
Detected in many
gallbladder:
17.5
large intestine:
23.0
small intestine:
15.1
stomach:
30.0
CORO2A
ENSSSCG00000005375
ENSG00000106789
Coronin 2A
Tissue enhanced
Detected in many
large intestine:
25.3
small intestine:
30.2
CPO
ENSSSCG00000016135
ENSG00000144410
Carboxypeptidase O
Tissue enriched
Detected in many
small intestine:
23.6
CXCL11
ENSSSCG00000008978
ENSG00000169248
C-X-C motif chemokine 11 precursor
Tissue enhanced
Detected in some
kidney:
12.1
large intestine:
22.7
testis:
8.4
CYP2C42
ENSSSCG00000024537
Cytochrome P450 2C42 precursor
Tissue enhanced
Detected in many
liver:
37.2
small intestine:
46.9
stomach:
40.2
DHRS11
ENSSSCG00000017690
ENSG00000278535
Dehydrogenase/reductase SDR family member 11
Tissue enhanced
Detected in all
heart:
33.3
large intestine:
65.0
DOLPP1
ENSSSCG00000031669
ENSG00000167130
Dolichyldiphosphatase 1
Low tissue specificity
Detected in all
DPEP1
ENSSSCG00000021971
ENSG00000015413
Dipeptidase 1 precursor
Group enriched
Detected in some
kidney:
56.8
small intestine:
56.3
DQX1
ENSSSCG00000022614
ENSG00000144045
DEAQ-box RNA dependent ATPase 1
Group enriched
Detected in all
large intestine:
16.0
small intestine:
32.5
stomach:
14.0
ENTPD5
ENSSSCG00000002355
ENSG00000187097
Ectonucleoside triphosphate diphosphohydrolase 5
Tissue enhanced
Detected in all
large intestine:
43.9
liver:
55.7
small intestine:
41.0
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