We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
477 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
Page
of 10 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
AARD
ENSSSCG00000006013
ENSG00000205002
Alanine and arginine rich domain containing protein
Tissue enhanced
Detected in some
choroid plexus:
22.4
lymphoid tissue:
11.8
testis:
20.4
ABRAXAS2
ENSSSCG00000010737
ENSG00000165660
Abraxas 2, BRISC complex subunit
Low tissue specificity
Detected in all
ADIG
ENSSSCG00000007346
ENSG00000182035
Adipogenin
Tissue enhanced
Detected in many
adipose tissue:
67.8
bone marrow:
38.6
testis:
34.1
AGBL2
ENSSSCG00000040838
ENSG00000165923
ATP/GTP binding protein like 2
Tissue enhanced
Detected in all
testis:
50.5
AK7
ENSSSCG00000002504
ENSG00000140057
Adenylate kinase 7
Tissue enhanced
Detected in some
choroid plexus:
32.5
fallopian tube:
49.5
upper respiratory system:
26.9
AK8
ENSSSCG00000039188
ENSG00000165695
Adenylate kinase 8
Tissue enhanced
Detected in all
fallopian tube:
28.4
testis:
33.9
upper respiratory system:
32.2
ALS2CR12
ENSSSCG00000016105
ENSG00000155749
Amyotrophic lateral sclerosis 2 chromosome region 12
Tissue enhanced
Detected in some
choroid plexus:
30.1
fallopian tube:
56.5
lung:
18.3
upper respiratory system:
22.7
ANGEL1
ENSSSCG00000002390
ENSG00000013523
Angel homolog 1
Tissue enhanced
Detected in all
testis:
42.9
ANKEF1
ENSSSCG00000007063
ENSG00000132623
Ankyrin repeat and EF-hand domain containing 1
Tissue enhanced
Detected in some
male glands:
18.0
testis:
35.6
ANKFN1
ENSSSCG00000017609
ENSG00000153930
Ankyrin repeat and fibronectin type III domain containing 1
Tissue enhanced
Detected in some
brain:
13.5
fallopian tube:
32.7
lung:
17.0
upper respiratory system:
20.1
ANKRD42
ENSSSCG00000014902
ENSG00000137494
Ankyrin repeat domain 42
Low tissue specificity
Detected in all
ANKRD6
ENSSSCG00000004322
ENSG00000135299
Ankyrin repeat domain 6
Low tissue specificity
Detected in all
ANKRD66
ENSSSCG00000032691
ENSG00000230062
Ankyrin repeat domain 66
Tissue enhanced
Detected in all
fallopian tube:
28.5
APOBEC4
ENSSSCG00000015561
ENSG00000173627
Apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4
Tissue enhanced
Detected in some
fallopian tube:
31.9
lung:
10.4
testis:
8.9
upper respiratory system:
19.0
ARMC4
ENSSSCG00000011069
ENSG00000169126
Armadillo repeat containing 4
Tissue enhanced
Detected in many
choroid plexus:
24.0
fallopian tube:
53.8
upper respiratory system:
36.3
ASB14
ENSSSCG00000035320
ENSG00000239388
Ankyrin repeat and SOCS box containing 14
Tissue enhanced
Detected in many
fallopian tube:
33.3
skeletal muscle:
21.4
ASCL3
ENSSSCG00000014572
ENSG00000176009
Achaete-scute family bHLH transcription factor 3
Tissue enhanced
Detected in many
salivary gland:
11.9
upper respiratory system:
21.0
ATP6V1C2
ENSSSCG00000008634
ENSG00000143882
ATPase H+ transporting V1 subunit C2
Tissue enhanced
Detected in many
brain:
22.5
epididymis:
24.1
male glands:
48.7
AXDND1
ENSSSCG00000015528
ENSG00000162779
Axonemal dynein light chain domain containing 1
Group enriched
Detected in some
fallopian tube:
13.0
testis:
51.3
B3GNT4
ENSSSCG00000009798
ENSG00000176383
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4
Tissue enhanced
Detected in many
fallopian tube:
37.4
lung:
26.9
upper respiratory system:
15.5
BBOF1
ENSSSCG00000002356
ENSG00000119636
Basal body orientation factor 1
Group enriched
Detected in some
fallopian tube:
13.8
testis:
45.0
BBS9
ENSSSCG00000024754
ENSG00000122507
Bardet-Biedl syndrome 9
Tissue enhanced
Detected in all
fallopian tube:
47.6
BTG4
ENSSSCG00000015020
ENSG00000137707
BTG anti-proliferation factor 4
Tissue enhanced
Detected in some
choroid plexus:
7.3
fallopian tube:
15.4
lung:
6.3
lymphoid tissue:
6.2
upper respiratory system:
8.6
C11orf70
ENSSSCG00000014980
ENSG00000137691
Chromosome 11 open reading frame 70
Tissue enhanced
Detected in many
choroid plexus:
29.2
kidney:
27.5
testis:
45.1
C11orf88
ENSSSCG00000015021
ENSG00000183644
Chromosome 11 open reading frame 88
Tissue enhanced
Detected in some
choroid plexus:
19.9
fallopian tube:
35.8
lung:
16.1
testis:
25.1
upper respiratory system:
28.2
C12orf56
ENSSSCG00000000464
ENSG00000185306
Chromosome 12 open reading frame 56
Tissue enhanced
Detected in many
esophagus:
8.9
male glands:
13.8
C16orf46
ENSSSCG00000035388
ENSG00000166455
Chromosome 16 open reading frame 46
Tissue enriched
Detected in many
testis:
58.9
C1orf189
ENSSSCG00000006555
ENSG00000163263
Chromosome 1 open reading frame 189
Tissue enhanced
Detected in some
fallopian tube:
41.3
testis:
76.4
upper respiratory system:
63.5
C1orf228
ENSSSCG00000033259
ENSG00000198520
Chromosome 1 open reading frame 228
Tissue enhanced
Detected in many
epididymis:
26.3
testis:
16.2
C1orf87
ENSSSCG00000003823
ENSG00000162598
Chromosome 1 open reading frame 87
Group enriched
Detected in some
fallopian tube:
46.7
lung:
18.8
upper respiratory system:
18.5
C20orf85
ENSSSCG00000007510
ENSG00000124237
Uncharacterized protein C20orf85 homolog
Tissue enhanced
Detected in some
fallopian tube:
103.3
lung:
54.0
upper respiratory system:
95.4
C22orf23
ENSSSCG00000000117
ENSG00000128346
Chromosome 22 open reading frame 23
Tissue enhanced
Detected in many
testis:
33.3
C2orf50
ENSSSCG00000034536
ENSG00000150873
Chromosome 2 open reading frame 50
Tissue enhanced
Detected in some
fallopian tube:
2.8
lung:
1.2
upper respiratory system:
2.8
C2orf70
ENSSSCG00000008565
ENSG00000173557
Chromosome 2 open reading frame 70
Group enriched
Detected in some
fallopian tube:
14.8
testis:
32.6
C3orf84
ENSSSCG00000011380
ENSG00000236980
Chromosome 3 open reading frame 84
Tissue enhanced
Detected in many
fallopian tube:
30.6
testis:
67.2
C4orf17
ENSSSCG00000009181
ENSG00000138813
Chromosome 4 open reading frame 17
Group enriched
Detected in many
fallopian tube:
22.7
liver:
20.2
testis:
48.0
C6orf118
ENSSSCG00000004028
ENSG00000112539
Chromosome 6 open reading frame 118
Tissue enhanced
Detected in some
choroid plexus:
20.7
fallopian tube:
37.1
testis:
23.9
upper respiratory system:
17.7
C8orf34
ENSSSCG00000035887
ENSG00000165084
Chromosome 8 open reading frame 34
Tissue enhanced
Detected in all
epididymis:
54.5
C9orf116
ENSSSCG00000036914
ENSG00000160345
Chromosome 9 open reading frame 116
Tissue enhanced
Detected in all
fallopian tube:
30.6
upper respiratory system:
30.1
C9orf135
ENSSSCG00000035668
ENSG00000204711
Chromosome 9 open reading frame 135
Tissue enhanced
Detected in all
testis:
31.0
C9orf24
ENSSSCG00000010980
ENSG00000164972
Chromosome 9 open reading frame 24
Tissue enhanced
Detected in many
choroid plexus:
17.5
fallopian tube:
20.2
testis:
68.6
CABCOCO1
ENSSSCG00000033268
ENSG00000183346
Ciliary associated calcium binding coiled-coil 1
Tissue enhanced
Detected in many
choroid plexus:
14.7
fallopian tube:
11.8
CABYR
ENSSSCG00000003711
ENSG00000154040
Calcium-binding tyrosine phosphorylation-regulated protein isoform 1
Tissue enriched
Detected in many
testis:
111.2
CAMKMT
ENSSSCG00000008447
ENSG00000143919
Calmodulin-lysine N-methyltransferase
Low tissue specificity
Detected in all
CAPS
ENSSSCG00000013532
ENSG00000105519
Calcyphosin isoform c
Tissue enhanced
Detected in some
choroid plexus:
28.3
epididymis:
42.8
lens:
97.7
CC2D2A
ENSSSCG00000008738
ENSG00000048342
Coiled-coil and C2 domain containing 2A
Low tissue specificity
Detected in all
CCDC113
ENSSSCG00000002803
ENSG00000103021
Coiled-coil domain-containing protein 113
Tissue enhanced
Detected in many
fallopian tube:
19.5
testis:
12.7
upper respiratory system:
11.7
CCDC114
ENSSSCG00000026689
ENSG00000105479
Coiled-coil domain containing 114
Tissue enhanced
Detected in many
choroid plexus:
27.8
fallopian tube:
35.7
lung:
33.0
CCDC129
ENSSSCG00000016671
ENSG00000180347
Coiled-coil domain containing 129
Tissue enhanced
Detected in many
epididymis:
18.5
salivary gland:
34.8
upper respiratory system:
27.9
CCDC146
ENSSSCG00000015412
ENSG00000135205
Coiled-coil domain containing 146
Tissue enhanced
Detected in all
fallopian tube:
31.2
testis:
32.7
Page
of 10 |
next »