We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
322 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 7 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
PRR16
ENSSSCG00000039760
ENSG00000184838
Proline rich 16
Tissue enhanced
Detected in many
adrenal gland:
54.5
pineal gland:
30.3
PTGER3
ENSSSCG00000003788
ENSG00000050628
Prostaglandin E2 receptor EP3 subtype
Tissue enhanced
Detected in many
cervix:
28.4
heart:
41.4
kidney:
29.8
PTPRB
ENSSSCG00000000504
ENSG00000127329
Protein tyrosine phosphatase, receptor type B
Low tissue specificity
Detected in many
PTPRM
ENSSSCG00000028805
ENSG00000173482
Protein tyrosine phosphatase, receptor type M
Low tissue specificity
Detected in all
RAMP2
ENSSSCG00000017389
ENSG00000131477
Receptor activity-modifying protein 2 precursor
Low tissue specificity
Detected in many
RAPGEF3
ENSSSCG00000023526
ENSG00000079337
Rap guanine nucleotide exchange factor 3
Low tissue specificity
Detected in many
RASIP1
ENSSSCG00000029151
ENSG00000105538
Ras interacting protein 1
Low tissue specificity
Detected in all
RBP7
ENSSSCG00000003399
ENSG00000162444
Retinoid-binding protein 7
Tissue enhanced
Detected in some
adipose tissue:
56.7
aorta:
13.7
bone marrow:
16.1
RDH16
ENSSSCG00000000419
ENSG00000139547
Retinol dehydrogenase 16 (all-trans) precursor
Tissue enriched
Detected in many
liver:
227.3
RERGL
ENSSSCG00000040822
ENSG00000111404
RERG like
Tissue enhanced
Detected in many
salivary gland:
19.0
RETSAT
ENSSSCG00000008237
ENSG00000042445
Retinol saturase
Tissue enhanced
Detected in all
adipose tissue:
86.0
RGS16
ENSSSCG00000015550
ENSG00000143333
Regulator of G protein signaling 16
Tissue enhanced
Detected in many
brain:
52.3
liver:
29.1
RIPOR1
ENSSSCG00000002774
ENSG00000039523
RHO family interacting cell polarization regulator 1
Tissue enhanced
Detected in all
lymphoid tissue:
76.6
ROBO4
ENSSSCG00000015203
ENSG00000154133
Roundabout guidance receptor 4
Low tissue specificity
Detected in many
RSPO3
ENSSSCG00000004218
ENSG00000146374
R-spondin-3 precursor
Tissue enhanced
Detected in many
ductus deferens:
44.6
dura mater:
45.6
SBF2
ENSSSCG00000013409
ENSG00000133812
SET binding factor 2
Low tissue specificity
Detected in all
SCARF1
ENSSSCG00000024071
ENSG00000074660
Scavenger receptor class F member 1
Low tissue specificity
Detected in many
SELP
ENSSSCG00000006288
ENSG00000174175
P-selectin precursor
Low tissue specificity
Detected in many
SEMA3G
ENSSSCG00000011440
ENSG00000010319
Semaphorin 3G
Low tissue specificity
Detected in many
SHE
ENSSSCG00000006547
ENSG00000169291
Src homology 2 domain containing E
Low tissue specificity
Detected in many
SHOX2
ENSSSCG00000025238
ENSG00000168779
Short stature homeobox protein 2
Tissue enhanced
Detected in many
bone marrow:
18.6
synovial tissue:
45.8
SHROOM4
ENSSSCG00000012309
ENSG00000158352
Shroom family member 4
Low tissue specificity
Detected in many
SIK2
ENSSSCG00000032941
ENSG00000170145
Salt inducible kinase 2
Tissue enhanced
Detected in all
adipose tissue:
63.3
SLC16A7
ENSSSCG00000000456
ENSG00000118596
Solute carrier family 16 member 7
Tissue enhanced
Detected in many
heart:
60.6
SLC25A34
ENSSSCG00000032950
ENSG00000162461
Solute carrier family 25 member 34
Tissue enhanced
Detected in many
adipose tissue:
43.3
heart:
25.9
skeletal muscle:
36.4
SLC26A10
ENSSSCG00000036029
ENSG00000135502
Solute carrier family 26 member 10
Tissue enriched
Detected in some
thyroid gland:
61.7
SLC36A2
ENSSSCG00000017086
ENSG00000186335
Solute carrier family 36 member 2
Group enriched
Detected in some
adipose tissue:
52.5
bone marrow:
25.4
skin:
14.0
vagus nerve:
33.5
SLC40A1
ENSSSCG00000027157
ENSG00000138449
Solute carrier family 40 member 1
Tissue enhanced
Detected in many
bone marrow:
62.4
liver:
70.2
lymphoid tissue:
58.0
SLC9A3R2
ENSSSCG00000008038
ENSG00000065054
Na(+)/H(+) exchange regulatory cofactor NHE-RF2
Low tissue specificity
Detected in all
SLPI
ENSSSCG00000039573
ENSG00000124107
Antileukoproteinase
Tissue enhanced
Detected in many
adipose tissue:
31.8
aorta:
33.3
fallopian tube:
64.8
SMIM2
ENSSSCG00000033908
ENSG00000139656
Small integral membrane protein 2
Tissue enhanced
Detected in many
adipose tissue:
10.6
heart:
8.7
SNRK
ENSSSCG00000011295
ENSG00000163788
SNF related kinase
Low tissue specificity
Detected in all
SOX17
ENSSSCG00000006256
ENSG00000164736
SRY-box 17
Tissue enhanced
Detected in many
endometrium:
45.6
fallopian tube:
28.2
SOX18
ENSSSCG00000037865
ENSG00000203883
SRY-box 18
Tissue enhanced
Detected in many
adipose tissue:
49.2
SPAAR
ENSSSCG00000035872
ENSG00000235387
Small regulatory polypeptide of amino acid response
Tissue enhanced
Detected in many
adipose tissue:
45.9
heart:
42.6
SPNS2
ENSSSCG00000017879
ENSG00000183018
Sphingolipid transporter 2
Low tissue specificity
Detected in many
SPRY4
ENSSSCG00000036322
ENSG00000187678
Sprouty RTK signaling antagonist 4
Low tissue specificity
Detected in many
SSUH2
ENSSSCG00000023082
ENSG00000125046
Ssu-2 homolog (C. elegans)
Tissue enhanced
Detected in many
cartilage:
12.9
epididymis:
16.7
ST3GAL2
ENSSSCG00000038843
ENSG00000157350
ST3 beta-galactoside alpha-2,3-sialyltransferase 2
Low tissue specificity
Detected in all
STAC
ENSSSCG00000023085
ENSG00000144681
SH3 and cysteine rich domain
Tissue enhanced
Detected in many
ductus deferens:
34.2
STARD8
ENSSSCG00000012828
ENSG00000130052
StAR related lipid transfer domain containing 8
Tissue enhanced
Detected in many
kidney:
39.0
lymphoid tissue:
32.9
STARD9
ENSSSCG00000022039
ENSG00000159433
StAR related lipid transfer domain containing 9
Tissue enhanced
Detected in all
vagus nerve:
46.1
STC1
ENSSSCG00000009642
ENSG00000159167
Stanniocalcin-1 precursor
Tissue enhanced
Detected in all
mesothelial tissue:
60.3
SUCNR1
ENSSSCG00000022105
ENSG00000198829
Succinate receptor 1
Tissue enriched
Detected in many
liver:
28.7
TAL1
ENSSSCG00000035847
ENSG00000162367
TAL bHLH transcription factor 1, erythroid differentiation factor
Tissue enhanced
Detected in many
mesothelial tissue:
33.6
TAS2R39
ENSSSCG00000021954
ENSG00000236398
Taste 2 receptor member 39
Tissue enriched
Detected in many
liver:
28.5
TAS2R40
ENSSSCG00000016467
ENSG00000221937
Taste 2 receptor member 40
Group enriched
Detected in many
heart:
9.7
liver:
36.1
TCIM
ENSSSCG00000032320
ENSG00000176907
Transcriptional and immune response regulator
Tissue enhanced
Detected in many
adipose tissue:
62.0
bone marrow:
73.2
TDRD10
ENSSSCG00000006546
ENSG00000163239
Tudor domain-containing protein 10
Low tissue specificity
Detected in many
TEAD4
ENSSSCG00000000736
ENSG00000197905
Transcriptional enhancer factor TEF-3
Tissue enhanced
Detected in many
mesothelial tissue:
35.0
skeletal muscle:
49.7
« prev
| Page
of 7 |
next »