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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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245 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000035337
Tryptase
Tissue enhanced
Detected in many
adipose tissue:
29.3
gallbladder:
54.4
na
ENSSSCG00000035634
ENSG00000163746,ENSG00000188313
Phospholipid scramblase 1
Tissue enhanced
Detected in all
kidney:
36.1
na
ENSSSCG00000035650
Tissue enhanced
Detected in all
lymphoid tissue:
69.8
na
ENSSSCG00000036017
Tissue enhanced
Detected in many
lymphoid tissue:
9.1
na
ENSSSCG00000036338
Low tissue specificity
Detected in many
na
ENSSSCG00000036644
Tissue enriched
Detected in many
lymphoid tissue:
16.9
na
ENSSSCG00000036872
Tissue enhanced
Detected in many
lymphoid tissue:
99.0
stomach:
98.9
na
ENSSSCG00000037566
Low tissue specificity
Detected in many
na
ENSSSCG00000039087
Low tissue specificity
Detected in many
na
ENSSSCG00000039913
Tissue enhanced
Detected in many
liver:
13.2
lymphoid tissue:
18.3
small intestine:
13.0
na
ENSSSCG00000040483
Tissue enriched
Detected in many
breast:
54.8
na
ENSSSCG00000040896
Tissue enhanced
Detected in many
aorta:
14.1
lung:
12.1
NIN
ENSSSCG00000005022
ENSG00000100503
Ninein
Low tissue specificity
Detected in all
NLRC5
ENSSSCG00000039751
ENSG00000140853
Protein NLRC5
Tissue enhanced
Detected in many
lymphoid tissue:
34.2
stomach:
48.2
NMI
ENSSSCG00000022011
ENSG00000123609
N-myc and STAT interactor
Low tissue specificity
Detected in many
NOD2
ENSSSCG00000038073
ENSG00000167207
Nucleotide-binding oligomerization domain-containing protein 2
Low tissue specificity
Detected in many
NOS2
ENSSSCG00000017755
ENSG00000007171
Nitric oxide synthase, inducible
Tissue enhanced
Detected in many
cartilage:
34.7
large intestine:
42.1
NRROS
ENSSSCG00000023527
ENSG00000174004
Negative regulator of reactive oxygen species
Tissue enhanced
Detected in many
lymphoid tissue:
25.6
OAS2
ENSSSCG00000009881
ENSG00000111335
2'-5'-oligoadenylate synthase 2
Tissue enhanced
Detected in all
small intestine:
70.3
PARP12
ENSSSCG00000016502
ENSG00000059378
Poly(ADP-ribose) polymerase family member 12
Low tissue specificity
Detected in many
PARP9
ENSSSCG00000027709
ENSG00000138496
Poly(ADP-ribose) polymerase family member 9
Low tissue specificity
Detected in all
PLEKHO1
ENSSSCG00000022784
ENSG00000023902
Pleckstrin homology domain containing O1
Low tissue specificity
Detected in all
PLK3
ENSSSCG00000003928
ENSG00000173846
Polo like kinase 3
Low tissue specificity
Detected in many
PPP1R18
ENSSSCG00000031492
ENSG00000146112
Phostensin
Low tissue specificity
Detected in all
PQLC3
ENSSSCG00000008631
ENSG00000162976
PQ loop repeat containing 3
Low tissue specificity
Detected in all
PRKCH
ENSSSCG00000005095
ENSG00000027075
Protein kinase C eta
Tissue enhanced
Detected in many
mesothelial tissue:
39.3
PSMB8
ENSSSCG00000026951
ENSG00000204264
Proteasome subunit beta 8
Tissue enhanced
Detected in many
large intestine:
38.6
lymphoid tissue:
36.3
PSMB9
ENSSSCG00000001463
ENSG00000240065
Proteasome subunit beta type-9
Tissue enhanced
Detected in many
large intestine:
46.4
PSME1
ENSSSCG00000002006
ENSG00000092010
Proteasome activator complex subunit 1
Low tissue specificity
Detected in all
PSTPIP1
ENSSSCG00000001867
ENSG00000140368
Proline-serine-threonine phosphatase-interacting protein 1
Low tissue specificity
Detected in all
PTGER4
ENSSSCG00000024439
ENSG00000171522
Prostaglandin E receptor 4
Tissue enhanced
Detected in many
bone marrow:
26.7
PTPN1
ENSSSCG00000007469
ENSG00000196396
Tyrosine-protein phosphatase non-receptor type 1
Low tissue specificity
Detected in all
PTPN12
ENSSSCG00000015411
ENSG00000127947
Protein tyrosine phosphatase, non-receptor type 12
Low tissue specificity
Detected in all
RAB29
ENSSSCG00000026269
ENSG00000117280
RAB29, member RAS oncogene family
Tissue enhanced
Detected in all
male glands:
35.6
RAB32
ENSSSCG00000004114
ENSG00000118492
Ras-related protein Rab-32
Low tissue specificity
Detected in all
RAB8A
ENSSSCG00000013848
ENSG00000167461
Ras-related protein Rab-8A
Low tissue specificity
Detected in all
RASA3
ENSSSCG00000009567
ENSG00000185989
RAS p21 protein activator 3
Low tissue specificity
Detected in all
RASGRP4
ENSSSCG00000002960
ENSG00000171777
RAS guanyl releasing protein 4
Tissue enhanced
Detected in many
lymphoid tissue:
25.9
REC8
ENSSSCG00000002001
ENSG00000100918
REC8 meiotic recombination protein
Low tissue specificity
Detected in many
RELB
ENSSSCG00000038879
ENSG00000104856
RELB proto-oncogene, NF-kB subunit
Tissue enhanced
Detected in many
lymphoid tissue:
32.8
RFTN1
ENSSSCG00000011198
ENSG00000131378
Raftlin, lipid raft linker 1
Tissue enhanced
Detected in many
lymphoid tissue:
43.9
RGS1
ENSSSCG00000032416
ENSG00000090104
Regulator of G protein signaling 1
Tissue enhanced
Detected in many
lymphoid tissue:
32.2
RGS19
ENSSSCG00000034841
ENSG00000171700
Regulator of G protein signaling 19
Tissue enhanced
Detected in many
lymphoid tissue:
52.2
RILPL2
ENSSSCG00000009778
ENSG00000150977
Rab interacting lysosomal protein like 2
Low tissue specificity
Detected in all
RNASEL
ENSSSCG00000015549
ENSG00000135828
2-5A-dependent ribonuclease
Low tissue specificity
Detected in all
RNF125
ENSSSCG00000003729
ENSG00000101695
Ring finger protein 125
Low tissue specificity
Detected in all
RNF213
ENSSSCG00000017146
ENSG00000173821
Ring finger protein 213
Tissue enhanced
Detected in all
stomach:
106.0
RPIA
ENSSSCG00000008207
ENSG00000153574
Ribose-5-phosphate isomerase
Low tissue specificity
Detected in all
RSAD2
ENSSSCG00000008648
ENSG00000134321
Radical S-adenosyl methionine domain-containing protein 2
Tissue enhanced
Detected in many
small intestine:
50.0
S1PR2
ENSSSCG00000013658
ENSG00000267534
Sphingosine 1-phosphate receptor 2
Low tissue specificity
Detected in all
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