We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
595 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 12 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
MRGPRF
ENSSSCG00000034441
ENSG00000172935
MAS related GPR family member F
Tissue enhanced
Detected in all
cervix:
49.6
smooth muscle:
55.1
MTMR11
ENSSSCG00000006664
ENSG00000014914
Myotubularin-related protein 11
Tissue enhanced
Detected in many
large intestine:
38.3
MUSK
ENSSSCG00000005456
ENSG00000030304
Muscle associated receptor tyrosine kinase
Tissue enhanced
Detected in many
skeletal muscle:
10.2
small intestine:
8.9
MYH11
ENSSSCG00000000146
ENSG00000133392
Myosin heavy chain 11
Tissue enhanced
Detected in many
ductus deferens:
178.9
smooth muscle:
565.6
urinary bladder:
187.5
MYL5
ENSSSCG00000027502
ENSG00000215375
Myosin light chain 5
Tissue enhanced
Detected in many
breast:
11.6
MYL9
ENSSSCG00000036402
ENSG00000101335
Myosin regulatory light polypeptide 9
Tissue enhanced
Detected in many
smooth muscle:
241.8
urinary bladder:
100.0
MYLK
ENSSSCG00000011867
ENSG00000065534
Myosin light chain kinase
Tissue enhanced
Detected in many
ductus deferens:
164.5
endometrium:
133.8
smooth muscle:
313.8
MYO15A
ENSSSCG00000032392
ENSG00000091536
Myosin XVA
Tissue enhanced
Detected in many
brain:
6.5
mesothelial tissue:
6.9
MYO1C
ENSSSCG00000021821
ENSG00000197879
Myosin IC
Low tissue specificity
Detected in many
MYO1E
ENSSSCG00000004587
ENSG00000157483
Myosin IE
Low tissue specificity
Detected in all
MYOCD
ENSSSCG00000031988
ENSG00000141052
Myocardin
Tissue enhanced
Detected in many
cervix:
26.2
endometrium:
28.2
heart:
30.6
N4BP3
ENSSSCG00000014034
ENSG00000145911
NEDD4 binding protein 3
Low tissue specificity
Detected in many
na
ENSSSCG00000000278
ENSG00000170653,ENSG00000267281
Low tissue specificity
Detected in all
na
ENSSSCG00000000608
Tissue enhanced
Detected in many
lymphoid tissue:
15.5
na
ENSSSCG00000000734
ENSG00000110900
Low tissue specificity
Detected in all
na
ENSSSCG00000001063
ENSG00000007944
Low tissue specificity
Detected in all
na
ENSSSCG00000001500
ENSG00000124749
Tissue enhanced
Detected in many
ductus deferens:
35.8
penis:
26.8
na
ENSSSCG00000002898
ENSG00000267796
Protein lin-37 homolog
Tissue enhanced
Detected in many
skeletal muscle:
133.0
smooth muscle:
143.5
na
ENSSSCG00000003079
ENSG00000073008
Tissue enhanced
Detected in all
cartilage:
35.6
ovary:
35.6
na
ENSSSCG00000003112
Low tissue specificity
Detected in all
na
ENSSSCG00000003253
ENSG00000179820
Low tissue specificity
Detected in many
na
ENSSSCG00000003655
Low tissue specificity
Detected in all
na
ENSSSCG00000004441
ENSG00000111817
Tissue enhanced
Detected in many
cartilage:
62.7
na
ENSSSCG00000005518
N-acetyllactosaminide alpha-1,3-galactosyltransferase
Low tissue specificity
Detected in many
na
ENSSSCG00000005519
Low tissue specificity
Detected in many
na
ENSSSCG00000007369
Tissue enhanced
Detected in many
heart:
56.9
skeletal muscle:
52.8
smooth muscle:
46.8
na
ENSSSCG00000008954
Tissue enhanced
Detected in many
cartilage:
86.3
liver:
86.3
na
ENSSSCG00000010331
ENSG00000122359
Low tissue specificity
Detected in all
na
ENSSSCG00000010369
ENSG00000204174,ENSG00000264717
Neuropeptide Y receptor type 4
Tissue enhanced
Detected in some
gallbladder:
13.6
smooth muscle:
32.2
na
ENSSSCG00000010370
ENSG00000264230
Annexin A8
Tissue enhanced
Detected in many
cartilage:
88.9
cornea:
140.2
mesothelial tissue:
67.1
na
ENSSSCG00000012014
Protein BTG3
Tissue enhanced
Detected in many
cartilage:
44.7
na
ENSSSCG00000012103
ENSG00000101850
Tissue enhanced
Detected in many
bone marrow:
8.3
na
ENSSSCG00000012113
Amelogenin
Low tissue specificity
Detected in many
na
ENSSSCG00000012699
Four and a half LIM domains protein 1
Tissue enhanced
Detected in many
skeletal muscle:
443.8
na
ENSSSCG00000012832
ENSG00000101825
Tissue enhanced
Detected in many
cartilage:
89.1
na
ENSSSCG00000014198
ENSG00000145777
Tissue enhanced
Detected in many
liver:
11.9
mesothelial tissue:
10.6
na
ENSSSCG00000015814
ENSG00000147526
Tissue enhanced
Detected in all
smooth muscle:
107.7
na
ENSSSCG00000021899
Tissue enhanced
Detected in many
cartilage:
59.0
vagus nerve:
24.8
na
ENSSSCG00000022176
Low tissue specificity
Detected in all
na
ENSSSCG00000022191
Tissue enhanced
Detected in many
smooth muscle:
13.3
na
ENSSSCG00000022506
ENSG00000142156
Tissue enhanced
Detected in many
cartilage:
196.4
synovial tissue:
157.5
na
ENSSSCG00000022839
ENSG00000169991
Group enriched
Detected in many
mouth:
19.9
skin:
68.8
na
ENSSSCG00000023611
ENSG00000168477
Tenascin-X precursor
Tissue enhanced
Detected in many
cartilage:
84.7
synovial tissue:
96.3
na
ENSSSCG00000024363
ENSG00000214706
Low tissue specificity
Detected in all
na
ENSSSCG00000024796
ENSG00000243566
Group enriched
Detected in many
adipose tissue:
59.8
mesothelial tissue:
180.8
na
ENSSSCG00000027669
ENSG00000079308
Tissue enhanced
Detected in many
smooth muscle:
147.1
na
ENSSSCG00000029160
ENSG00000204388,ENSG00000204389
Tissue enhanced
Detected in all
male glands:
194.8
na
ENSSSCG00000029449
ENSG00000116690
Tissue enriched
Detected in some
cartilage:
708.5
na
ENSSSCG00000029623
Tissue enhanced
Detected in many
gallbladder:
12.9
smooth muscle:
24.0
urinary bladder:
12.2
na
ENSSSCG00000030432
ENSG00000188060
Low tissue specificity
Detected in many
« prev
| Page
of 12 |
next »
MENU
