We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
415 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 9 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
CCDC8
ENSSSCG00000033830
ENSG00000169515
Coiled-coil domain containing 8
Low tissue specificity
Detected in all
CD151
ENSSSCG00000012840
ENSG00000177697
CD151 antigen
Low tissue specificity
Detected in all
CD276
ENSSSCG00000001917
ENSG00000103855
CD276 molecule
Tissue enhanced
Detected in all
ovary:
56.2
CDC42EP1
ENSSSCG00000026108
ENSG00000128283
CDC42 effector protein 1
Low tissue specificity
Detected in many
CERCAM
ENSSSCG00000005650
ENSG00000167123
Cerebral endothelial cell adhesion molecule
Tissue enhanced
Detected in many
cartilage:
38.6
synovial tissue:
37.8
CHAD
ENSSSCG00000017569
ENSG00000136457
Chondroadherin
Tissue enriched
Detected in many
cartilage:
273.3
CHRDL2
ENSSSCG00000014843
ENSG00000054938
Chordin like 2
Group enriched
Detected in some
cervix:
147.1
gallbladder:
92.8
CHST12
ENSSSCG00000007567
ENSG00000136213
Carbohydrate sulfotransferase 12
Low tissue specificity
Detected in all
CHST3
ENSSSCG00000023662
ENSG00000122863
Carbohydrate sulfotransferase 3
Tissue enhanced
Detected in many
cartilage:
38.4
CHSY1
ENSSSCG00000004825
ENSG00000131873
Chondroitin sulfate synthase 1
Low tissue specificity
Detected in all
CILP2
ENSSSCG00000013934
ENSG00000160161
Cartilage intermediate layer protein 2
Tissue enriched
Detected in some
cartilage:
152.8
CLEC3A
ENSSSCG00000034604
ENSG00000166509
C-type lectin domain family 3 member A
Tissue enriched
Detected in some
cartilage:
199.8
CLIP1
ENSSSCG00000009793
ENSG00000130779
CAP-Gly domain containing linker protein 1
Low tissue specificity
Detected in all
CNPY4
ENSSSCG00000032054
ENSG00000166997
Canopy FGF signaling regulator 4
Low tissue specificity
Detected in all
COL28A1
ENSSSCG00000015342
ENSG00000215018
Collagen type XXVIII alpha 1 chain
Tissue enriched
Detected in many
vagus nerve:
84.0
COL2A1
ENSSSCG00000025523
ENSG00000139219
Collagen type II alpha 1 chain
Tissue enriched
Detected in some
cartilage:
1246.4
COL8A1
ENSSSCG00000011973
ENSG00000144810
Collagen type VIII alpha 1 chain
Tissue enhanced
Detected in many
cartilage:
78.5
cornea:
48.6
dura mater:
40.6
COL8A2
ENSSSCG00000033641
ENSG00000171812
Collagen type VIII alpha 2 chain
Tissue enhanced
Detected in many
cornea:
73.0
dura mater:
18.9
COLEC12
ENSSSCG00000040397
ENSG00000158270
Collectin subfamily member 12
Tissue enhanced
Detected in many
cartilage:
131.9
synovial tissue:
54.7
COMP
ENSSSCG00000013916
ENSG00000105664
Cartilage oligomeric matrix protein
Tissue enriched
Detected in some
cartilage:
691.8
COPZ2
ENSSSCG00000017526
ENSG00000005243
Coatomer protein complex subunit zeta 2
Low tissue specificity
Detected in all
COX4I2
ENSSSCG00000038384
ENSG00000131055
Cytochrome c oxidase subunit 4I2
Tissue enhanced
Detected in many
cartilage:
113.6
CPNE3
ENSSSCG00000006135
ENSG00000085719
Copine 3
Low tissue specificity
Detected in all
CPXM1
ENSSSCG00000007170
ENSG00000088882
Carboxypeptidase X, M14 family member 1
Tissue enhanced
Detected in many
cartilage:
29.8
CPXM2
ENSSSCG00000010728
ENSG00000121898
Carboxypeptidase X, M14 family member 2
Tissue enhanced
Detected in all
cornea:
87.2
CPZ
ENSSSCG00000032151
ENSG00000109625
Carboxypeptidase Z
Tissue enhanced
Detected in many
cartilage:
27.7
skin:
25.7
CRABP2
ENSSSCG00000006472
ENSG00000143320
Cellular retinoic acid-binding protein 2
Tissue enhanced
Detected in many
brain:
53.9
cartilage:
35.4
mouth:
67.3
CREB5
ENSSSCG00000016690
ENSG00000146592
CAMP responsive element binding protein 5
Tissue enhanced
Detected in many
cartilage:
153.5
synovial tissue:
46.5
CRIM1
ENSSSCG00000008504
ENSG00000150938
Cysteine rich transmembrane BMP regulator 1
Tissue enhanced
Detected in all
cartilage:
107.8
lens:
90.0
CRISPLD1
ENSSSCG00000006171
ENSG00000121005
Cysteine rich secretory protein LCCL domain containing 1
Group enriched
Detected in many
cartilage:
26.9
cornea:
12.9
dura mater:
44.0
CRTAP
ENSSSCG00000039054
ENSG00000170275
Cartilage associated protein
Low tissue specificity
Detected in all
CSGALNACT1
ENSSSCG00000007005
ENSG00000147408
Chondroitin sulfate N-acetylgalactosaminyltransferase 1
Tissue enhanced
Detected in many
cartilage:
57.9
CSPG4
ENSSSCG00000001873
ENSG00000173546
Chondroitin sulfate proteoglycan 4
Tissue enhanced
Detected in many
cartilage:
77.1
penis:
30.9
CSRP1
ENSSSCG00000020976
ENSG00000159176
Cysteine and glycine rich protein 1
Tissue enhanced
Detected in all
smooth muscle:
335.7
CTGF
ENSSSCG00000004192
ENSG00000118523
Connective tissue growth factor
Tissue enriched
Detected in many
cartilage:
384.2
CTNS
ENSSSCG00000017865
ENSG00000040531
Cystinosin, lysosomal cystine transporter
Tissue enhanced
Detected in all
vagus nerve:
43.2
CUL7
ENSSSCG00000001657
ENSG00000044090
Cullin 7
Low tissue specificity
Detected in all
CYB5R3
ENSSSCG00000000038
ENSG00000100243
Cytochrome b5 reductase 3
Low tissue specificity
Detected in all
CYP1B1
ENSSSCG00000033844
ENSG00000138061
Cytochrome P450 family 1 subfamily B member 1
Tissue enhanced
Detected in many
dura mater:
50.8
ovary:
77.7
CYP26B1
ENSSSCG00000008311
ENSG00000003137
Cytochrome P450 family 26 subfamily B member 1
Tissue enhanced
Detected in many
cartilage:
68.0
penis:
20.0
skin:
17.6
CYTH3
ENSSSCG00000034768
ENSG00000008256
Cytohesin 3
Low tissue specificity
Detected in all
DAG1
ENSSSCG00000034357
ENSG00000173402
Dystroglycan 1
Tissue enhanced
Detected in all
vagus nerve:
122.6
DCBLD2
ENSSSCG00000011977
ENSG00000057019
Discoidin, CUB and LCCL domain containing 2
Tissue enhanced
Detected in all
ovary:
62.9
DDAH2
ENSSSCG00000038514
ENSG00000213722
Dimethylarginine dimethylaminohydrolase 2
Low tissue specificity
Detected in all
DDR2
ENSSSCG00000006338
ENSG00000162733
Discoidin domain receptor tyrosine kinase 2
Tissue enhanced
Detected in many
cartilage:
103.4
cervix:
79.1
DHH
ENSSSCG00000000188
ENSG00000139549
Desert hedgehog
Tissue enriched
Detected in some
vagus nerve:
39.7
DHRS3
ENSSSCG00000003439
ENSG00000162496
Dehydrogenase/reductase 3
Low tissue specificity
Detected in all
DKK2
ENSSSCG00000032094
ENSG00000155011
Dickkopf WNT signaling pathway inhibitor 2
Tissue enhanced
Detected in many
cornea:
29.4
ovary:
44.1
DLX5
ENSSSCG00000038838
ENSG00000105880
Homeobox protein DLX-5
Tissue enhanced
Detected in many
cartilage:
27.8
dura mater:
19.6
endometrium:
38.9
DTWD2
ENSSSCG00000014225
ENSG00000169570
DTW domain containing 2
Low tissue specificity
Detected in all
« prev
| Page
of 9 |
next »
MENU
