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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Other congenital disorders
Other diseases
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Subclass
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Disease
Keyword
Chromosome
1
2
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7
8
9
10
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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544 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
TTLL12
ENSSSCG00000000034
ENSG00000100304
Tubulin tyrosine ligase like 12
Low tissue specificity
Detected in all
TUBGCP2
ENSSSCG00000010773
ENSG00000130640
Tubulin gamma complex associated protein 2
Low tissue specificity
Detected in all
UBAP2L
ENSSSCG00000006553
ENSG00000143569
Ubiquitin associated protein 2 like
Low tissue specificity
Detected in all
UBE2J2
ENSSSCG00000003334
ENSG00000160087
Ubiquitin conjugating enzyme E2 J2
Low tissue specificity
Detected in all
UBE3C
ENSSSCG00000016409
ENSG00000009335
Ubiquitin protein ligase E3C
Low tissue specificity
Detected in all
UBTD1
ENSSSCG00000010521
ENSG00000165886
Ubiquitin domain containing 1
Low tissue specificity
Detected in all
UCK1
ENSSSCG00000005717
ENSG00000130717
Uridine-cytidine kinase 1
Low tissue specificity
Detected in all
ULK1
ENSSSCG00000009742
ENSG00000177169
Unc-51 like autophagy activating kinase 1
Low tissue specificity
Detected in all
USP10
ENSSSCG00000002670
ENSG00000103194
Ubiquitin specific peptidase 10
Tissue enhanced
Detected in all
lens:
103.5
VARS
ENSSSCG00000038950
ENSG00000204394
Valine--tRNA ligase
Tissue enriched
Detected in all
testis:
76.7
VAT1
ENSSSCG00000024059
ENSG00000108828
Vesicle amine transport 1
Low tissue specificity
Detected in all
VEGFB
ENSSSCG00000013037
ENSG00000173511
Vascular endothelial growth factor B
Low tissue specificity
Detected in all
VKORC1
ENSSSCG00000035364
ENSG00000167397
Vitamin K epoxide reductase complex subunit 1
Low tissue specificity
Detected in all
VPS54
ENSSSCG00000027509
ENSG00000143952
VPS54, GARP complex subunit
Low tissue specificity
Detected in all
WASHC1
ENSSSCG00000000746
ENSG00000181404
WASH complex subunit 1
Low tissue specificity
Detected in all
WBP4
ENSSSCG00000031627
ENSG00000120688
WW domain binding protein 4
Low tissue specificity
Detected in all
WDR34
ENSSSCG00000005655
ENSG00000119333
WD repeat domain 34
Low tissue specificity
Detected in all
WFIKKN1
ENSSSCG00000037013
ENSG00000127578
WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1
Tissue enhanced
Detected in many
ovary:
13.4
WIPI2
ENSSSCG00000007580
ENSG00000157954
WD repeat domain phosphoinositide-interacting protein 2
Low tissue specificity
Detected in all
XAB2
ENSSSCG00000013582
ENSG00000076924
XPA binding protein 2
Low tissue specificity
Detected in all
XPO6
ENSSSCG00000007812
ENSG00000169180
Exportin 6
Low tissue specificity
Detected in all
YBX1
ENSSSCG00000028485
ENSG00000065978
Y-box binding protein 1
Tissue enhanced
Detected in all
lens:
296.5
YTHDF1
ENSSSCG00000040086
ENSG00000149658
YTH N6-methyladenosine RNA binding protein 1
Low tissue specificity
Detected in all
YY1
ENSSSCG00000037558
ENSG00000100811
YY1 transcription factor
Low tissue specificity
Detected in all
ZBED3
ENSSSCG00000014095
ENSG00000132846
Zinc finger BED-type containing 3
Low tissue specificity
Detected in all
ZBTB10
ENSSSCG00000006155
ENSG00000205189
Zinc finger and BTB domain containing 10
Low tissue specificity
Detected in all
ZBTB12
ENSSSCG00000001421
ENSG00000204366
Zinc finger and BTB domain-containing protein 12
Low tissue specificity
Detected in all
ZBTB20
ENSSSCG00000026113
ENSG00000181722
Zinc finger and BTB domain containing 20
Low tissue specificity
Detected in all
ZBTB43
ENSSSCG00000032752
ENSG00000169155
Zinc finger and BTB domain containing 43
Low tissue specificity
Detected in all
ZFAND2A
ENSSSCG00000007554
ENSG00000178381
Zinc finger AN1-type containing 2A
Low tissue specificity
Detected in all
ZFAND3
ENSSSCG00000039952
ENSG00000156639
Zinc finger AN1-type containing 3
Low tissue specificity
Detected in all
ZFPL1
ENSSSCG00000013007
ENSG00000162300
Zinc finger protein like 1
Low tissue specificity
Detected in all
ZFYVE21
ENSSSCG00000040945
ENSG00000100711
Zinc finger FYVE-type containing 21
Low tissue specificity
Detected in all
ZGPAT
ENSSSCG00000036595
ENSG00000197114
Zinc finger CCCH-type and G-patch domain containing
Low tissue specificity
Detected in all
ZHX2
ENSSSCG00000021586
ENSG00000178764
Zinc fingers and homeoboxes 2
Low tissue specificity
Detected in all
ZNF444
ENSSSCG00000035770
ENSG00000167685
Zinc finger protein 444
Low tissue specificity
Detected in all
ZNF462
ENSSSCG00000031592
ENSG00000148143
Zinc finger protein 462
Low tissue specificity
Detected in all
ZNF524
ENSSSCG00000024661
ENSG00000171443
Zinc finger protein 524
Low tissue specificity
Detected in all
ZNF579
ENSSSCG00000025138
ENSG00000218891
Zinc finger protein 579
Low tissue specificity
Detected in all
ZNF652
ENSSSCG00000017546
ENSG00000198740
Zinc finger protein 652
Low tissue specificity
Detected in all
ZNF688
ENSSSCG00000037875
ENSG00000229809
Zinc finger protein 688
Low tissue specificity
Detected in all
ZNF697
ENSSSCG00000006718
ENSG00000143067
Zinc finger protein 697
Tissue enhanced
Detected in many
salivary gland:
31.3
ZNF703
ENSSSCG00000015828
ENSG00000183779
Zinc finger protein 703
Low tissue specificity
Detected in all
ZNHIT2
ENSSSCG00000013003
ENSG00000174276
Zinc finger HIT-type containing 2
Tissue enhanced
Detected in all
testis:
51.9
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