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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
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5
6
7
8
9
10
11
12
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14
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
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Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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2285 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
ZBTB49
ENSSSCG00000008728
ENSG00000168826
Zinc finger and BTB domain containing 49
Low tissue specificity
Detected in all
ZBTB7A
ENSSSCG00000029236
ENSG00000178951
Zinc finger and BTB domain containing 7A
Low tissue specificity
Detected in all
ZBTB7B
ENSSSCG00000028606
ENSG00000160685
Zinc finger and BTB domain containing 7B
Tissue enhanced
Detected in all
stomach:
101.5
ZC3H13
ENSSSCG00000009414
ENSG00000123200
Zinc finger CCCH-type containing 13
Low tissue specificity
Detected in all
ZC3H14
ENSSSCG00000002426
ENSG00000100722
Zinc finger CCCH-type containing 14
Low tissue specificity
Detected in all
ZC3H18
ENSSSCG00000035967
ENSG00000158545
Zinc finger CCCH-type containing 18
Low tissue specificity
Detected in all
ZC3H3
ENSSSCG00000006956
ENSG00000014164
Zinc finger CCCH-type containing 3
Low tissue specificity
Detected in all
ZC3H4
ENSSSCG00000003110
ENSG00000130749
Zinc finger CCCH-type containing 4
Low tissue specificity
Detected in all
ZC3H7A
ENSSSCG00000007895
ENSG00000122299
Zinc finger CCCH-type containing 7A
Low tissue specificity
Detected in all
ZC3H7B
ENSSSCG00000033036
ENSG00000100403
Zinc finger CCCH-type containing 7B
Low tissue specificity
Detected in all
ZC3HAV1L
ENSSSCG00000032786
ENSG00000146858
Zinc finger CCCH-type containing, antiviral 1 like
Low tissue specificity
Detected in all
ZC3HC1
ENSSSCG00000016565
ENSG00000091732
Zinc finger C3HC-type containing 1
Low tissue specificity
Detected in all
ZCCHC11
ENSSSCG00000003859
ENSG00000134744
Zinc finger CCHC-type containing 11
Low tissue specificity
Detected in all
ZCCHC14
ENSSSCG00000002656
ENSG00000140948
Zinc finger CCHC-type containing 14
Low tissue specificity
Detected in all
ZCCHC2
ENSSSCG00000004897
ENSG00000141664
Zinc finger CCHC-type containing 2
Low tissue specificity
Detected in all
ZCCHC6
ENSSSCG00000010952
ENSG00000083223
Zinc finger CCHC-type containing 6
Tissue enhanced
Detected in all
liver:
108.0
ZCCHC7
ENSSSCG00000005346
ENSG00000147905
Zinc finger CCHC-type containing 7
Low tissue specificity
Detected in all
ZCCHC8
ENSSSCG00000009792
ENSG00000033030
Zinc finger CCHC domain-containing protein 8
Low tissue specificity
Detected in all
ZCCHC9
ENSSSCG00000014129
ENSG00000131732
Zinc finger CCHC domain-containing protein 9
Low tissue specificity
Detected in all
ZDHHC4
ENSSSCG00000039719
ENSG00000136247
Zinc finger DHHC-type containing 4
Low tissue specificity
Detected in all
ZDHHC7
ENSSSCG00000002667
ENSG00000153786
Zinc finger DHHC-type containing 7
Low tissue specificity
Detected in all
ZFAT
ENSSSCG00000030947
ENSG00000066827
Zinc finger and AT-hook domain containing
Low tissue specificity
Detected in all
ZFC3H1
ENSSSCG00000000509
ENSG00000133858
Zinc finger C3H1-type containing
Low tissue specificity
Detected in all
ZFP1
ENSSSCG00000022668
ENSG00000184517
ZFP1 zinc finger protein
Low tissue specificity
Detected in all
ZFP2
ENSSSCG00000029380
ENSG00000198939
ZFP2 zinc finger protein
Low tissue specificity
Detected in all
ZFP28
ENSSSCG00000027774
ENSG00000196867
ZFP28 zinc finger protein
Low tissue specificity
Detected in all
ZFP30
ENSSSCG00000029408
ENSG00000120784
ZFP30 zinc finger protein
Low tissue specificity
Detected in all
ZFP62
ENSSSCG00000014539
ENSG00000196670
ZFP62 zinc finger protein
Low tissue specificity
Detected in all
ZFP64
ENSSSCG00000007481
ENSG00000020256
Zinc finger protein 64
Low tissue specificity
Detected in all
ZFP90
ENSSSCG00000032372
ENSG00000184939
ZFP90 zinc finger protein
Low tissue specificity
Detected in all
ZFPM1
ENSSSCG00000040875
ENSG00000179588
Zinc finger protein, FOG family member 1
Tissue enhanced
Detected in many
gallbladder:
33.0
liver:
31.7
stomach:
72.9
ZFYVE1
ENSSSCG00000002337
ENSG00000165861
Zinc finger FYVE-type containing 1
Low tissue specificity
Detected in all
ZFYVE26
ENSSSCG00000002298
ENSG00000072121
Zinc finger FYVE-type containing 26
Low tissue specificity
Detected in all
ZMIZ1
ENSSSCG00000010329
ENSG00000108175
Zinc finger MIZ-type containing 1
Low tissue specificity
Detected in all
ZMYM1
ENSSSCG00000034292
ENSG00000197056
Zinc finger MYM-type containing 1
Low tissue specificity
Detected in all
ZMYM2
ENSSSCG00000021814
ENSG00000121741
Zinc finger MYM-type containing 2
Low tissue specificity
Detected in all
ZNF12
ENSSSCG00000034517
ENSG00000164631
Zinc finger protein 12
Low tissue specificity
Detected in all
ZNF131
ENSSSCG00000040959
ENSG00000172262
Zinc finger protein 131
Low tissue specificity
Detected in all
ZNF133
ENSSSCG00000007093
ENSG00000125846
Zinc finger protein 133
Low tissue specificity
Detected in all
ZNF135
ENSSSCG00000021888
ENSG00000176293
Zinc finger protein 135
Low tissue specificity
Detected in all
ZNF142
ENSSSCG00000016191
ENSG00000115568
Zinc finger protein 142
Low tissue specificity
Detected in all
ZNF143
ENSSSCG00000022070
ENSG00000166478
Zinc finger protein 143
Low tissue specificity
Detected in all
ZNF146
ENSSSCG00000025355
ENSG00000167635
Zinc finger protein 146
Low tissue specificity
Detected in all
ZNF16
ENSSSCG00000034031
ENSG00000170631
Zinc finger protein 16
Low tissue specificity
Detected in all
ZNF174
ENSSSCG00000007958
ENSG00000103343
Zinc finger protein 174
Low tissue specificity
Detected in all
ZNF18
ENSSSCG00000018014
ENSG00000154957
Zinc finger protein 18
Low tissue specificity
Detected in all
ZNF182
ENSSSCG00000012284
ENSG00000147118
Zinc finger protein 182
Low tissue specificity
Detected in all
ZNF184
ENSSSCG00000001164
ENSG00000096654
Zinc finger protein 184
Low tissue specificity
Detected in all
ZNF197
ENSSSCG00000011304
ENSG00000186448
Zinc finger protein 197
Low tissue specificity
Detected in all
ZNF2
ENSSSCG00000008117
ENSG00000275111
Zinc finger protein 2
Low tissue specificity
Detected in all
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