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Gene name
Human disease related genes
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Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
Class
Cancers
Cardiovascular diseases
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Endocrine and metabolic diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
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Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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2285 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000039606
Low tissue specificity
Detected in all
na
ENSSSCG00000039624
ENSG00000184271
Low tissue specificity
Detected in many
na
ENSSSCG00000039688
Low tissue specificity
Detected in all
na
ENSSSCG00000039699
Tissue enhanced
Detected in many
small intestine:
10.6
stomach:
8.9
na
ENSSSCG00000039712
Low tissue specificity
Detected in all
na
ENSSSCG00000039736
ENSG00000284526
Tissue enriched
Detected in many
testis:
193.4
na
ENSSSCG00000039775
Low tissue specificity
Detected in many
na
ENSSSCG00000039819
Low tissue specificity
Detected in many
na
ENSSSCG00000039830
ENSG00000177239
Low tissue specificity
Detected in all
na
ENSSSCG00000039833
Low tissue specificity
Detected in all
na
ENSSSCG00000039865
Tissue enhanced
Detected in all
thyroid gland:
44.7
na
ENSSSCG00000039876
ENSG00000119707
RNA-binding protein 25
Low tissue specificity
Detected in all
na
ENSSSCG00000040018
Low tissue specificity
Detected in all
na
ENSSSCG00000040236
ENSG00000142544
Low tissue specificity
Detected in many
na
ENSSSCG00000040264
Tissue enhanced
Detected in many
cartilage:
36.3
stomach:
28.3
na
ENSSSCG00000040392
Low tissue specificity
Detected in all
na
ENSSSCG00000040426
ENSG00000237489
Low tissue specificity
Detected in all
na
ENSSSCG00000040446
Low tissue specificity
Detected in many
na
ENSSSCG00000040448
Low tissue specificity
Detected in all
na
ENSSSCG00000040482
Tissue enhanced
Detected in many
skin:
7.9
small intestine:
4.3
vagus nerve:
5.1
na
ENSSSCG00000040692
Low tissue specificity
Detected in many
na
ENSSSCG00000040739
Low tissue specificity
Detected in all
na
ENSSSCG00000040864
Low tissue specificity
Detected in all
na
ENSSSCG00000040897
ENSG00000160298
Tissue enhanced
Detected in many
fallopian tube:
31.1
na
ENSSSCG00000040968
ENSG00000141994
Tissue enhanced
Detected in all
testis:
39.3
na
ENSSSCG00000040974
Low tissue specificity
Detected in all
NAA16
ENSSSCG00000009435
ENSG00000172766
N(alpha)-acetyltransferase 16, NatA auxiliary subunit
Low tissue specificity
Detected in all
NAA25
ENSSSCG00000009887
ENSG00000111300
N(alpha)-acetyltransferase 25, NatB auxiliary subunit
Low tissue specificity
Detected in all
NAA35
ENSSSCG00000010956
ENSG00000135040
N(alpha)-acetyltransferase 35, NatC auxiliary subunit
Low tissue specificity
Detected in all
NAA60
ENSSSCG00000021065
ENSG00000122390
N(alpha)-acetyltransferase 60, NatF catalytic subunit
Low tissue specificity
Detected in all
NADK
ENSSSCG00000038967
ENSG00000008130
NAD kinase
Tissue enhanced
Detected in all
stomach:
63.1
NADSYN1
ENSSSCG00000012859
ENSG00000172890
NAD synthetase 1
Low tissue specificity
Detected in all
NAGPA
ENSSSCG00000007925
ENSG00000103174
N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase precursor
Low tissue specificity
Detected in all
NAIF1
ENSSSCG00000005630
ENSG00000171169
Nuclear apoptosis inducing factor 1
Low tissue specificity
Detected in all
NAMPT
ENSSSCG00000015435
ENSG00000105835
Nicotinamide phosphoribosyltransferase
Tissue enriched
Detected in all
lens:
169.3
NANP
ENSSSCG00000039380
ENSG00000170191
N-acetylneuraminic acid phosphatase
Low tissue specificity
Detected in all
NANS
ENSSSCG00000005373
ENSG00000095380
Sialic acid synthase
Low tissue specificity
Detected in all
NAPRT
ENSSSCG00000031825
ENSG00000147813
Nicotinate phosphoribosyltransferase
Tissue enhanced
Detected in all
kidney:
50.4
NARFL
ENSSSCG00000008002
ENSG00000103245
Nuclear prelamin A recognition factor like
Low tissue specificity
Detected in all
NARS2
ENSSSCG00000014893
ENSG00000137513
Asparaginyl-tRNA synthetase 2, mitochondrial
Low tissue specificity
Detected in all
NAT10
ENSSSCG00000013304
ENSG00000135372
N-acetyltransferase 10
Low tissue specificity
Detected in all
NAT9
ENSSSCG00000017231
ENSG00000109065
N-acetyltransferase 9
Low tissue specificity
Detected in all
NAXD
ENSSSCG00000029502
ENSG00000213995
ATP-dependent (S)-NAD(P)H-hydrate dehydratase isoform 1
Low tissue specificity
Detected in all
NBEAL2
ENSSSCG00000011330
ENSG00000160796
Neurobeachin like 2
Tissue enhanced
Detected in many
stomach:
75.0
NCAPD2
ENSSSCG00000000693
ENSG00000010292
Non-SMC condensin I complex subunit D2
Low tissue specificity
Detected in all
NCBP3
ENSSSCG00000017870
ENSG00000074356
Nuclear cap binding subunit 3
Low tissue specificity
Detected in all
NCL
ENSSSCG00000016275
ENSG00000115053
Nucleolin
Low tissue specificity
Detected in all
NCLN
ENSSSCG00000013475
ENSG00000125912
Nicalin
Low tissue specificity
Detected in all
NCOA2
ENSSSCG00000006194
ENSG00000140396
Nuclear receptor coactivator 2
Low tissue specificity
Detected in all
NCOA3
ENSSSCG00000007458
ENSG00000124151
Nuclear receptor coactivator 3
Low tissue specificity
Detected in all
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