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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
Cardiovascular diseases
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Endocrine and metabolic diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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2285 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
HNRNPA2B1
ENSSSCG00000036350
ENSG00000122566
Heterogeneous nuclear ribonucleoprotein A2/B1
Low tissue specificity
Detected in all
HNRNPH1
ENSSSCG00000014022
ENSG00000169045
Heterogeneous nuclear ribonucleoprotein H1
Low tissue specificity
Detected in all
HNRNPH3
ENSSSCG00000010238
ENSG00000096746
Heterogeneous nuclear ribonucleoprotein H3
Low tissue specificity
Detected in all
HNRNPM
ENSSSCG00000013602
ENSG00000099783
Heterogeneous nuclear ribonucleoprotein M
Low tissue specificity
Detected in all
HNRNPU
ENSSSCG00000010877
ENSG00000153187
Heterogeneous nuclear ribonucleoprotein U
Low tissue specificity
Detected in all
HNRNPUL1
ENSSSCG00000030049
ENSG00000105323
Heterogeneous nuclear ribonucleoprotein U like 1
Low tissue specificity
Detected in all
HPS1
ENSSSCG00000010534
ENSG00000107521
Hermansky-Pudlak syndrome 1 protein
Low tissue specificity
Detected in all
HPS4
ENSSSCG00000009960
ENSG00000100099
Hermansky-Pudlak syndrome 4 protein
Low tissue specificity
Detected in all
HS1BP3
ENSSSCG00000030115
ENSG00000118960
HCLS1 binding protein 3
Low tissue specificity
Detected in all
HSPBAP1
ENSSSCG00000011873
ENSG00000169087
HSPB1 associated protein 1
Low tissue specificity
Detected in all
HTT
ENSSSCG00000008697
ENSG00000197386
Huntingtin
Low tissue specificity
Detected in all
HUS1
ENSSSCG00000028523
ENSG00000136273
Checkpoint protein HUS1
Low tissue specificity
Detected in all
HUWE1
ENSSSCG00000012328
ENSG00000086758
HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase
Low tissue specificity
Detected in all
ICE2
ENSSSCG00000004577
ENSG00000128915
Interactor of little elongation complex ELL subunit 2
Low tissue specificity
Detected in all
ICK
ENSSSCG00000002628
ENSG00000112144
Intestinal cell kinase
Low tissue specificity
Detected in all
IFT88
ENSSSCG00000009270
ENSG00000032742
Intraflagellar transport 88
Low tissue specificity
Detected in all
IGF2R
ENSSSCG00000004044
ENSG00000197081
Cation-independent mannose-6-phosphate receptor precursor
Low tissue specificity
Detected in all
IGFALS
ENSSSCG00000008013
ENSG00000099769
Insulin-like growth factor-binding protein complex acid labile subunit precursor
Tissue enriched
Detected in many
liver:
47.0
IGHMBP2
ENSSSCG00000012878
ENSG00000132740
Immunoglobulin mu binding protein 2
Low tissue specificity
Detected in all
IK
ENSSSCG00000014372
ENSG00000113141
IK cytokine
Low tissue specificity
Detected in all
IKBKG
ENSSSCG00000012825
ENSG00000269335
NF-kappa-B essential modulator
Low tissue specificity
Detected in all
IKZF5
ENSSSCG00000023565
ENSG00000095574
IKAROS family zinc finger 5
Low tissue specificity
Detected in all
IL9R
ENSSSCG00000007973
ENSG00000124334
Interleukin 9 receptor
Tissue enhanced
Detected in many
epididymis:
12.4
male glands:
18.2
ILF3
ENSSSCG00000013638
ENSG00000129351
Interleukin enhancer binding factor 3
Low tissue specificity
Detected in all
ILKAP
ENSSSCG00000016339
ENSG00000132323
ILK associated serine/threonine phosphatase
Low tissue specificity
Detected in all
IMPA2
ENSSSCG00000024162
ENSG00000141401
Inositol monophosphatase 2
Tissue enhanced
Detected in many
salivary gland:
40.1
IMPDH2
ENSSSCG00000011372
ENSG00000178035
Inosine monophosphate dehydrogenase 2
Low tissue specificity
Detected in all
INAFM1
ENSSSCG00000037986
ENSG00000257704
InaF motif containing 1
Low tissue specificity
Detected in many
ING1
ENSSSCG00000034818
ENSG00000153487
Inhibitor of growth family member 1
Low tissue specificity
Detected in all
ING5
ENSSSCG00000032505
ENSG00000168395
Inhibitor of growth family member 5
Low tissue specificity
Detected in all
INO80
ENSSSCG00000004753
ENSG00000128908
INO80 complex subunit
Low tissue specificity
Detected in all
INO80D
ENSSSCG00000016125
ENSG00000114933
INO80 complex subunit D
Low tissue specificity
Detected in all
INO80E
ENSSSCG00000032921
ENSG00000169592
INO80 complex subunit E
Low tissue specificity
Detected in all
INPP4B
ENSSSCG00000009050
ENSG00000109452
Inositol polyphosphate-4-phosphatase type II B
Low tissue specificity
Detected in all
INPP5K
ENSSSCG00000030707
ENSG00000132376
Inositol polyphosphate 5-phosphatase K
Low tissue specificity
Detected in all
INPPL1
ENSSSCG00000014811
ENSG00000165458
Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2
Low tissue specificity
Detected in all
INTS1
ENSSSCG00000007558
ENSG00000164880
Integrator complex subunit 1
Low tissue specificity
Detected in all
INTS11
ENSSSCG00000003339
ENSG00000127054
Integrator complex subunit 11
Low tissue specificity
Detected in all
INTS12
ENSSSCG00000030617
ENSG00000138785
Integrator complex subunit 12
Low tissue specificity
Detected in all
INTS13
ENSSSCG00000030443
ENSG00000064102
Protein asunder homolog
Tissue enriched
Detected in all
lens:
78.8
INTS14
ENSSSCG00000004936
ENSG00000138614
Integrator complex subunit 14
Low tissue specificity
Detected in all
INTS6
ENSSSCG00000009384
ENSG00000102786
Integrator complex subunit 6
Low tissue specificity
Detected in all
INTS7
ENSSSCG00000015602
ENSG00000143493
Integrator complex subunit 7
Low tissue specificity
Detected in all
INTS8
ENSSSCG00000006096
ENSG00000164941
Integrator complex subunit 8
Low tissue specificity
Detected in all
IQANK1
ENSSSCG00000034987
ENSG00000203499
IQ motif and ankyrin repeat containing 1
Tissue enhanced
Detected in many
cartilage:
18.5
epididymis:
14.0
IQCE
ENSSSCG00000007568
ENSG00000106012
IQ motif containing E
Tissue enhanced
Detected in all
testis:
75.9
IRAK1
ENSSSCG00000012795
ENSG00000184216
Interleukin 1 receptor associated kinase 1
Low tissue specificity
Detected in all
IRF3
ENSSSCG00000003178
ENSG00000126456
Interferon regulatory factor 3
Low tissue specificity
Detected in all
ISOC2
ENSSSCG00000003289
ENSG00000063241
Isochorismatase domain containing 2
Low tissue specificity
Detected in all
ITGA2B
ENSSSCG00000017357
ENSG00000186566
Integrin alpha-IIb precursor
Low tissue specificity
Detected in all
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