We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
406 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 9 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
C8B
ENSSSCG00000003834
ENSG00000021852
Complement component C8 beta chain precursor
Tissue enriched
Detected in many
liver:
121.4
C8G
ENSSSCG00000005840
ENSG00000176919
Complement component C8 gamma chain precursor
Tissue enriched
Detected in some
liver:
111.8
CA5A
ENSSSCG00000035629
ENSG00000174990
Carbonic anhydrase 5A
Tissue enriched
Detected in some
liver:
65.5
CCL16
ENSSSCG00000040940
ENSG00000275152
C-C motif chemokine ligand 16
Tissue enriched
Detected in many
liver:
145.0
CDKL1
ENSSSCG00000034516
ENSG00000100490
Cyclin dependent kinase like 1
Tissue enhanced
Detected in all
kidney:
48.2
CHRD
ENSSSCG00000025270
ENSG00000090539
Chordin
Tissue enriched
Detected in many
liver:
64.9
CLDN14
ENSSSCG00000020680
ENSG00000159261
Claudin-14
Tissue enriched
Detected in some
liver:
60.1
CLEC4F
ENSSSCG00000023258
ENSG00000152672
C-type lectin domain family 4 member F
Group enriched
Detected in some
liver:
24.3
lymphoid tissue:
18.0
retina:
19.2
CLEC4G
ENSSSCG00000039007
ENSG00000182566
C-type lectin domain family 4 member G
Group enriched
Detected in all
liver:
53.4
lymphoid tissue:
26.1
COLEC10
ENSSSCG00000029324
ENSG00000184374
Collectin subfamily member 10
Tissue enriched
Detected in many
liver:
42.0
COLEC11
ENSSSCG00000025629
ENSG00000118004
Collectin subfamily member 11
Tissue enriched
Detected in all
liver:
41.1
CPB2
ENSSSCG00000009413
ENSG00000080618
Carboxypeptidase B2
Tissue enriched
Detected in some
liver:
136.6
CPN2
ENSSSCG00000025128
ENSG00000178772
Carboxypeptidase N subunit 2
Group enriched
Detected in some
adrenal gland:
19.1
liver:
37.0
testis:
11.5
CRIP3
ENSSSCG00000001672
ENSG00000146215
Cysteine rich protein 3
Group enriched
Detected in many
heart:
6.8
liver:
20.1
lymphoid tissue:
11.2
testis:
15.1
CRP
ENSSSCG00000006403
ENSG00000132693
C-reactive protein precursor
Tissue enhanced
Detected in all
liver:
48.4
CYB5A
ENSSSCG00000004875
ENSG00000166347
Cytochrome b5
Tissue enhanced
Detected in all
ovary:
184.6
testis:
159.0
CYP1A2
ENSSSCG00000001901
ENSG00000140505
Cytochrome P450 1A2
Tissue enriched
Detected in some
liver:
135.1
CYP2C49
ENSSSCG00000010488
Cytochrome P450 2C49 precursor
Tissue enriched
Detected in some
liver:
115.3
CYP2D25
ENSSSCG00000000046
ENSG00000100197
Vitamin D(3) 25-hydroxylase
Group enriched
Detected in some
kidney:
72.5
liver:
215.7
CYP2E1
ENSSSCG00000010780
ENSG00000130649
Cytochrome P450 2E1
Tissue enriched
Detected in some
liver:
200.9
CYP3A39
ENSSSCG00000023320
Sus scrofa cytochrome P450 3A39 (CYP3A39), mRNA.
Tissue enriched
Detected in many
liver:
376.2
CYP4A24
ENSSSCG00000003891
Taurochenodeoxycholic 6 alpha-hydroxylase
Group enriched
Detected in some
kidney:
154.6
liver:
127.4
CYP7A1
ENSSSCG00000006238
ENSG00000167910
Cholesterol 7-alpha-monooxygenase
Tissue enriched
Detected in many
liver:
82.5
DHCR7
ENSSSCG00000021181
ENSG00000172893
7-dehydrocholesterol reductase
Tissue enhanced
Detected in all
liver:
65.5
ovary:
37.3
DHTKD1
ENSSSCG00000039539
ENSG00000181192
Dehydrogenase E1 and transketolase domain containing 1
Tissue enhanced
Detected in all
liver:
53.8
DIO1
ENSSSCG00000028896
ENSG00000211452
Type I iodothyronine deiodinase
Group enriched
Detected in some
kidney:
41.6
liver:
32.0
DMBX1
ENSSSCG00000003900
ENSG00000197587
Diencephalon/mesencephalon homeobox 1
Group enriched
Detected in some
brain:
7.0
liver:
24.2
DMGDH
ENSSSCG00000014110
ENSG00000132837
Dimethylglycine dehydrogenase
Group enriched
Detected in some
kidney:
50.6
liver:
81.6
DPYS
ENSSSCG00000006040
ENSG00000147647
Dihydropyrimidinase
Tissue enriched
Detected in some
liver:
91.5
ERG28
ENSSSCG00000036494
ENSG00000133935
Probable ergosterol biosynthetic protein 28 precursor
Tissue enhanced
Detected in all
liver:
79.3
ESPNL
ENSSSCG00000016335
ENSG00000144488
Espin like
Tissue enhanced
Detected in many
liver:
8.0
lymphoid tissue:
7.2
ETNK2
ENSSSCG00000015276
ENSG00000143845
Ethanolamine kinase 2
Tissue enriched
Detected in many
liver:
106.4
EVA1A
ENSSSCG00000035958
ENSG00000115363
Eva-1 homolog A, regulator of programmed cell death
Group enriched
Detected in all
liver:
81.2
male glands:
20.9
F10
ENSSSCG00000009558
ENSG00000126218
Coagulation factor X precursor
Tissue enriched
Detected in many
liver:
84.8
F12
ENSSSCG00000031274
ENSG00000131187
Coagulation factor XII precursor
Tissue enriched
Detected in many
liver:
125.1
F13B
ENSSSCG00000023301
ENSG00000143278
Coagulation factor XIII B chain
Tissue enriched
Detected in all
liver:
46.6
F2
ENSSSCG00000013252
ENSG00000180210
Prothrombin precursor
Tissue enriched
Detected in some
liver:
165.9
F9
ENSSSCG00000012711
ENSG00000101981
Coagulation factor IX
Tissue enriched
Detected in some
liver:
146.3
FBP1
ENSSSCG00000031174
ENSG00000165140
Fructose-1,6-bisphosphatase 1
Tissue enhanced
Detected in all
kidney:
61.0
liver:
48.3
FETUB
ENSSSCG00000011800
ENSG00000090512
Fetuin B
Tissue enriched
Detected in some
liver:
101.9
FGB
ENSSSCG00000008997
ENSG00000171564
Fibrinogen beta chain precursor
Tissue enriched
Detected in some
liver:
413.6
FGG
ENSSSCG00000024314
ENSG00000171557
Fibrinogen gamma chain precursor
Tissue enriched
Detected in some
liver:
270.2
FGL1
ENSSSCG00000035335
ENSG00000104760
Fibrinogen like 1
Tissue enriched
Detected in some
liver:
105.5
FOXRED1
ENSSSCG00000030017
ENSG00000110074
FAD-dependent oxidoreductase domain-containing protein 1
Tissue enhanced
Detected in all
liver:
63.9
FTCD
ENSSSCG00000027926
Formimidoyltransferase-cyclodeaminase
Group enriched
Detected in some
kidney:
44.3
liver:
100.5
G6PC
ENSSSCG00000036449
ENSG00000131482
Glucose-6-phosphatase
Group enriched
Detected in many
kidney:
43.9
liver:
87.0
GC
ENSSSCG00000027609
ENSG00000145321
GC, vitamin D binding protein
Tissue enriched
Detected in some
liver:
361.7
GCGR
ENSSSCG00000034891
ENSG00000215644
Glucagon receptor
Tissue enriched
Detected in some
liver:
135.9
GCKR
ENSSSCG00000028672
ENSG00000084734
Glucokinase regulator
Tissue enhanced
Detected in all
liver:
49.1
GLYATL2
ENSSSCG00000013148
ENSG00000156689
Glycine-N-acyltransferase like 2
Tissue enhanced
Detected in some
cartilage:
10.4
liver:
16.4
skin:
8.9
« prev
| Page
of 9 |
next »