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Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
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16
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
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Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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570 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
C7orf50
ENSSSCG00000038777
ENSG00000146540
Chromosome 7 open reading frame 50
Low tissue specificity
Detected in all
CA2
ENSSSCG00000006140
ENSG00000104267
Carbonic anhydrase 2
Tissue enhanced
Detected in many
choroid plexus:
70.9
stomach:
149.1
CABLES1
ENSSSCG00000003705
ENSG00000134508
Cdk5 and Abl enzyme substrate 1
Low tissue specificity
Detected in many
CACNA1C
ENSSSCG00000027725
ENSG00000151067
Calcium voltage-gated channel subunit alpha1 C
Tissue enhanced
Detected in many
heart:
35.8
smooth muscle:
38.1
CADPS2
ENSSSCG00000016611
ENSG00000081803
Calcium dependent secretion activator 2
Tissue enhanced
Detected in many
brain:
78.6
CAMKK2
ENSSSCG00000009815
ENSG00000110931
Calcium/calmodulin dependent protein kinase kinase 2
Tissue enhanced
Detected in many
brain:
47.9
CAMSAP1
ENSSSCG00000005753
ENSG00000130559
Calmodulin regulated spectrin associated protein 1
Low tissue specificity
Detected in all
CAMSAP2
ENSSSCG00000027314
ENSG00000118200
Calmodulin regulated spectrin associated protein family member 2
Low tissue specificity
Detected in all
CAMTA2
ENSSSCG00000017902
ENSG00000108509
Calmodulin binding transcription activator 2
Low tissue specificity
Detected in all
CARMIL1
ENSSSCG00000001100
ENSG00000079691
Capping protein regulator and myosin 1 linker 1
Low tissue specificity
Detected in all
CARMIL2
ENSSSCG00000022722
ENSG00000159753
Capping protein regulator and myosin 1 linker 2
Tissue enhanced
Detected in many
lymphoid tissue:
40.8
CASP1
ENSSSCG00000028711
ENSG00000137752
Caspase-1
Tissue enhanced
Detected in many
large intestine:
31.0
small intestine:
29.7
CBX7
ENSSSCG00000000090
ENSG00000100307
Chromobox 7
Low tissue specificity
Detected in all
CCDC149
ENSSSCG00000023001
ENSG00000181982
Coiled-coil domain containing 149
Tissue enhanced
Detected in all
male glands:
56.4
CCDC28B
ENSSSCG00000031514
ENSG00000160050
Coiled-coil domain containing 28B
Low tissue specificity
Detected in all
CCNJL
ENSSSCG00000017036
ENSG00000135083
Cyclin J like
Tissue enhanced
Detected in many
fallopian tube:
14.6
lymphoid tissue:
18.6
CCR5
ENSSSCG00000024344
ENSG00000160791
C-C chemokine receptor type 5
Low tissue specificity
Detected in many
CCRL2
ENSSSCG00000023557
ENSG00000121797
Chemokine C-C motif receptor-like 2
Low tissue specificity
Detected in many
CD247
ENSSSCG00000006309
ENSG00000198821
T-cell surface glycoprotein CD3 zeta chain precursor
Tissue enhanced
Detected in many
lymphoid tissue:
72.3
testis:
28.8
CD83
ENSSSCG00000021576
ENSG00000112149
CD83 molecule
Low tissue specificity
Detected in all
CDH11
ENSSSCG00000002795
ENSG00000140937
Cadherin-11 preproprotein
Tissue enhanced
Detected in many
dura mater:
51.5
CDK16
ENSSSCG00000012269
ENSG00000102225
Cyclin dependent kinase 16
Low tissue specificity
Detected in all
CDS1
ENSSSCG00000009231
ENSG00000163624
Phosphatidate cytidylyltransferase 1
Low tissue specificity
Detected in many
CHDH
ENSSSCG00000011456
ENSG00000016391
Choline dehydrogenase
Tissue enhanced
Detected in many
liver:
44.2
CHRM3
ENSSSCG00000026176
ENSG00000133019
Muscarinic acetylcholine receptor M3
Tissue enhanced
Detected in many
salivary gland:
36.8
smooth muscle:
32.6
CLCN3
ENSSSCG00000009713
ENSG00000109572
Chloride voltage-gated channel 3
Low tissue specificity
Detected in all
CLCN5
ENSSSCG00000023026
ENSG00000171365
H(+)/Cl(-) exchange transporter 5
Tissue enhanced
Detected in many
kidney:
46.2
CLPB
ENSSSCG00000036887
ENSG00000162129
ClpB homolog, mitochondrial AAA ATPase chaperonin
Tissue enriched
Detected in all
testis:
84.4
CMIP
ENSSSCG00000002689
ENSG00000153815
C-Maf inducing protein
Low tissue specificity
Detected in all
CNDP1
ENSSSCG00000004869
ENSG00000150656
Beta-Ala-His dipeptidase
Tissue enhanced
Detected in many
brain:
15.7
epididymis:
26.7
kidney:
52.6
CPT1A
ENSSSCG00000012880
ENSG00000110090
Carnitine O-palmitoyltransferase 1, liver isoform
Low tissue specificity
Detected in all
CSF1R
ENSSSCG00000014441
ENSG00000182578
Colony stimulating factor 1 receptor
Tissue enhanced
Detected in many
lymphoid tissue:
74.4
synovial tissue:
55.6
CTPS1
ENSSSCG00000003973
ENSG00000171793
CTP synthase 1
Tissue enhanced
Detected in all
lymphoid tissue:
27.8
CTTNBP2NL
ENSSSCG00000006781
ENSG00000143079
CTTNBP2 N-terminal like
Low tissue specificity
Detected in all
CYSLTR1
ENSSSCG00000039203
ENSG00000173198
Cysteinyl leukotriene receptor 1
Tissue enhanced
Detected in many
lymphoid tissue:
17.1
CYSRT1
ENSSSCG00000005857
ENSG00000197191
Cysteine rich tail 1
Tissue enriched
Detected in many
mouth:
59.0
DAGLA
ENSSSCG00000013079
ENSG00000134780
Diacylglycerol lipase alpha
Low tissue specificity
Detected in many
DCT
ENSSSCG00000009490
ENSG00000080166
L-dopachrome tautomerase
Tissue enhanced
Detected in all
male glands:
23.5
DDC
ENSSSCG00000022009
ENSG00000132437
Dopa decarboxylase
Group enriched
Detected in some
brain:
23.8
kidney:
83.0
pineal gland:
80.8
DDX58
ENSSSCG00000030408
ENSG00000107201
Probable ATP-dependent RNA helicase DDX58
Low tissue specificity
Detected in all
DEAF1
ENSSSCG00000012850
ENSG00000177030
DEAF1, transcription factor
Low tissue specificity
Detected in all
DENND1A
ENSSSCG00000005585
ENSG00000119522
DENN domain containing 1A
Low tissue specificity
Detected in all
DGKH
ENSSSCG00000009431
ENSG00000102780
Diacylglycerol kinase eta
Tissue enhanced
Detected in all
ductus deferens:
44.1
DGKZ
ENSSSCG00000013259
ENSG00000149091
Diacylglycerol kinase zeta
Low tissue specificity
Detected in all
DHRS13
ENSSSCG00000017778
ENSG00000167536
Dehydrogenase/reductase 13
Low tissue specificity
Detected in all
DHX57
ENSSSCG00000008479
ENSG00000163214
DExH-box helicase 57
Low tissue specificity
Detected in all
DLG3
ENSSSCG00000012375
ENSG00000082458
Discs large MAGUK scaffold protein 3
Tissue enhanced
Detected in many
male glands:
43.5
DLGAP4
ENSSSCG00000007317
ENSG00000080845
DLG associated protein 4
Low tissue specificity
Detected in all
DLK2
ENSSSCG00000001682
ENSG00000171462
Protein delta homolog 2
Tissue enhanced
Detected in many
esophagus:
16.7
male glands:
13.9
mouth:
26.2
skin:
14.7
DMWD
ENSSSCG00000038738
ENSG00000185800
DM1 locus, WD repeat containing
Low tissue specificity
Detected in all
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