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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Other congenital disorders
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Subclass
Class
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Disease
Keyword
Chromosome
1
2
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6
7
8
9
10
11
12
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
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Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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1159 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
KIAA1143
ENSSSCG00000032344
ENSG00000163807
Uncharacterized
Low tissue specificity
Detected in all
KISS1
ENSSSCG00000038350
ENSG00000170498
Metastasis-suppressor KiSS-1 precursor
Low tissue specificity
Detected in all
KLF17
ENSSSCG00000024191
ENSG00000171872
Krueppel-like factor 17
Tissue enhanced
Detected in all
testis:
13.2
KLK11
ENSSSCG00000038283
ENSG00000167757
Kallikrein related peptidase 11
Low tissue specificity
Detected in all
KLK12
ENSSSCG00000032280
ENSG00000186474
Kallikrein related peptidase 12
Low tissue specificity
Detected in all
KLK14
ENSSSCG00000036362
ENSG00000129437
Kallikrein related peptidase 14
Low tissue specificity
Detected in all
KLK5
ENSSSCG00000034792
ENSG00000167754
Kallikrein related peptidase 5
Tissue enhanced
Detected in all
skin:
37.3
KLRB1
ENSSSCG00000039708
ENSG00000111796
Killer cell lectin like receptor B1
Low tissue specificity
Detected in all
KLRG2
ENSSSCG00000016506
ENSG00000188883
Killer cell lectin like receptor G2
Low tissue specificity
Detected in all
KRI1
ENSSSCG00000013644
ENSG00000129347
KRI1 homolog
Low tissue specificity
Detected in all
L2HGDH
ENSSSCG00000005016
ENSG00000087299
L-2-hydroxyglutarate dehydrogenase
Low tissue specificity
Detected in all
LEMD1
ENSSSCG00000015291
ENSG00000186007
LEM domain containing 1
Low tissue specificity
Detected in all
LIPI
ENSSSCG00000012004
ENSG00000188992
Lipase I
Low tissue specificity
Detected in all
LIPN
ENSSSCG00000031373
ENSG00000204020
Lipase family member N
Low tissue specificity
Detected in all
LRIG2
ENSSSCG00000034581
ENSG00000198799
Leucine rich repeats and immunoglobulin like domains 2
Low tissue specificity
Detected in all
LRIT1
ENSSSCG00000034402
ENSG00000148602
Leucine rich repeat, Ig-like and transmembrane domains 1
Tissue enriched
Detected in all
retina:
50.8
LRRC14B
ENSSSCG00000033375
ENSG00000185028
Leucine rich repeat containing 14B
Low tissue specificity
Detected in all
LRRC25
ENSSSCG00000036963
ENSG00000175489
Leucine rich repeat containing 25
Low tissue specificity
Detected in all
LRRC31
ENSSSCG00000032225
ENSG00000114248
Leucine rich repeat containing 31
Low tissue specificity
Detected in all
LRRC66
ENSSSCG00000008832
ENSG00000188993
Leucine rich repeat containing 66
Low tissue specificity
Detected in all
LSMEM1
ENSSSCG00000040053
ENSG00000181016
Leucine rich single-pass membrane protein 1
Low tissue specificity
Detected in all
LYG2
ENSSSCG00000034542
ENSG00000185674
Lysozyme g2
Tissue enriched
Detected in many
skin:
20.9
LYPD5
ENSSSCG00000003073
ENSG00000159871
LY6/PLAUR domain containing 5
Low tissue specificity
Detected in all
MAD2L1
ENSSSCG00000036256
ENSG00000164109
Mitotic arrest deficient 2 like 1
Low tissue specificity
Detected in all
MAP1LC3C
ENSSSCG00000034838
ENSG00000197769
Microtubule associated protein 1 light chain 3 gamma
Low tissue specificity
Detected in all
MAPKAPK5
ENSSSCG00000009890
ENSG00000089022
MAP kinase-activated protein kinase 5
Low tissue specificity
Detected in all
MARCO
ENSSSCG00000015716
ENSG00000019169
Macrophage receptor MARCO
Low tissue specificity
Detected in all
MASTL
ENSSSCG00000011065
ENSG00000120539
Microtubule associated serine/threonine kinase like
Low tissue specificity
Detected in all
MBOAT4
ENSSSCG00000015847
ENSG00000177669
Ghrelin O-acyltransferase
Low tissue specificity
Detected in all
MCEE
ENSSSCG00000035696
ENSG00000124370
Methylmalonyl-CoA epimerase, mitochondrial
Low tissue specificity
Detected in all
MCTS1
ENSSSCG00000030833
ENSG00000232119
MCTS1, re-initiation and release factor
Low tissue specificity
Detected in many
MDFIC2
ENSSSCG00000040266
ENSG00000242120
MyoD family inhibitor domain containing 2
Tissue enhanced
Detected in all
smooth muscle:
32.8
MDH1B
ENSSSCG00000016133
ENSG00000138400
Malate dehydrogenase 1B
Low tissue specificity
Detected in all
MED30
ENSSSCG00000033577
ENSG00000164758
Mediator complex subunit 30
Low tissue specificity
Detected in all
MGAT5
ENSSSCG00000015701
ENSG00000152127
Mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase
Tissue enhanced
Detected in all
male glands:
101.7
MICU1
ENSSSCG00000010289
ENSG00000107745
Calcium uptake protein 1, mitochondrial
Low tissue specificity
Detected in all
MILR1
ENSSSCG00000032612
ENSG00000271605
Mast cell immunoglobulin like receptor 1
Low tissue specificity
Detected in all
MNDA
ENSSSCG00000037532
ENSG00000163563
Myeloid cell nuclear differentiation antigen
Low tissue specificity
Detected in all
MOCOS
ENSSSCG00000003744
ENSG00000075643
Molybdenum cofactor sulfurase
Tissue enhanced
Detected in all
epididymis:
29.0
MOS
ENSSSCG00000006248
ENSG00000172680
Proto-oncogene serine/threonine-protein kinase mos
Low tissue specificity
Detected in all
MPIG6B
ENSSSCG00000034664
ENSG00000204420
Megakaryocyte and platelet inhibitory receptor G6b
Low tissue specificity
Detected in all
MPST
ENSSSCG00000038190
ENSG00000128309
Mercaptopyruvate sulfurtransferase
Low tissue specificity
Detected in all
MR1
ENSSSCG00000015540
ENSG00000153029
Major histocompatibility complex, class I-related
Low tissue specificity
Detected in all
MS4A7
ENSSSCG00000013102
ENSG00000166927
Membrane-spanning 4-domains subfamily A member 7
Low tissue specificity
Detected in all
MSANTD1
ENSSSCG00000040111
ENSG00000188981
Myb/SANT DNA binding domain containing 1
Low tissue specificity
Detected in all
MSH2
ENSSSCG00000008428
ENSG00000095002
DNA mismatch repair protein Msh2
Low tissue specificity
Detected in all
MSS51
ENSSSCG00000010300
ENSG00000166343
MSS51 mitochondrial translational activator
Tissue enriched
Detected in all
skeletal muscle:
61.1
MTERF2
ENSSSCG00000039109
ENSG00000120832
Mitochondrial transcription termination factor 2
Low tissue specificity
Detected in all
MTERF3
ENSSSCG00000006090
ENSG00000156469
Mitochondrial transcription termination factor 3
Low tissue specificity
Detected in all
MUTYH
ENSSSCG00000003919
ENSG00000132781
MutY DNA glycosylase
Low tissue specificity
Detected in all
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