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Gene name
Human disease related genes
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External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
Class
Cancers
Cardiovascular diseases
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Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
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Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
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THE PROJECT
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RELEASE HISTORY
826 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
MYEF2
ENSSSCG00000004661
ENSG00000104177
Myelin expression factor 2
Low tissue specificity
Detected in many
na
ENSSSCG00000000952
ENSG00000186908
Low tissue specificity
Detected in all
na
ENSSSCG00000001216
Low tissue specificity
Detected in many
na
ENSSSCG00000001762
ENSG00000136425
Tissue enhanced
Detected in many
brain:
56.5
na
ENSSSCG00000002379
ENSG00000119640
Acylphosphatase-1 isoform 1
Low tissue specificity
Detected in all
na
ENSSSCG00000002637
ENSG00000003249
Tissue enhanced
Detected in many
brain:
24.3
lens:
36.0
na
ENSSSCG00000002720
ENSG00000140839,ENSG00000157322,ENSG00000157335
Tissue enhanced
Detected in some
choroid plexus:
102.5
kidney:
65.9
na
ENSSSCG00000002921
ENSG00000105270
Tissue enhanced
Detected in many
brain:
48.9
lens:
46.1
pineal gland:
35.0
na
ENSSSCG00000002937
Low tissue specificity
Detected in all
na
ENSSSCG00000002938
ENSG00000196967,ENSG00000245680
Low tissue specificity
Detected in all
na
ENSSSCG00000003240
Low tissue specificity
Detected in all
na
ENSSSCG00000003326
ENSG00000198300
Tissue enhanced
Detected in all
brain:
42.8
kidney:
27.9
pituitary gland:
36.3
na
ENSSSCG00000003935
ENSG00000117419
Tissue enhanced
Detected in many
brain:
19.5
cartilage:
27.1
pineal gland:
17.9
retina:
14.8
na
ENSSSCG00000004224
ENSG00000111906
Low tissue specificity
Detected in all
na
ENSSSCG00000004656
ENSG00000255302
Low tissue specificity
Detected in all
na
ENSSSCG00000004674
Tissue enriched
Detected in many
brain:
57.1
na
ENSSSCG00000004836
ENSG00000179455
Tissue enhanced
Detected in many
brain:
13.1
lens:
11.9
na
ENSSSCG00000005257
ENSG00000083067
Tissue enhanced
Detected in many
choroid plexus:
72.7
lens:
49.2
na
ENSSSCG00000005326
Tissue enhanced
Detected in many
brain:
8.7
na
ENSSSCG00000006149
ENSG00000184672
Tissue enhanced
Detected in some
brain:
24.8
lens:
27.6
pineal gland:
21.7
retina:
10.6
na
ENSSSCG00000006179
Tissue enhanced
Detected in all
brain:
46.6
na
ENSSSCG00000006773
ENSG00000184599
Tissue enhanced
Detected in all
brain:
18.9
na
ENSSSCG00000006985
Tissue enhanced
Detected in many
lens:
14.6
liver:
29.5
na
ENSSSCG00000007314
ENSG00000088367
Tissue enhanced
Detected in all
lens:
57.2
na
ENSSSCG00000007421
ENSG00000124116
Tissue enhanced
Detected in many
lens:
15.7
testis:
25.9
na
ENSSSCG00000007435
ENSG00000100979
Phospholipid transfer protein precursor
Tissue enhanced
Detected in many
adrenal gland:
223.5
ovary:
87.8
synovial tissue:
57.6
na
ENSSSCG00000007692
ENSG00000170027
Tissue enhanced
Detected in all
brain:
70.0
na
ENSSSCG00000007728
ENSG00000185274
Tissue enhanced
Detected in many
brain:
33.7
cornea:
40.9
vagus nerve:
25.4
na
ENSSSCG00000008250
ENSG00000066032
Group enriched
Detected in many
brain:
27.9
lens:
85.1
pineal gland:
27.0
na
ENSSSCG00000008254
Group enriched
Detected in many
brain:
31.5
lens:
105.5
pineal gland:
34.4
na
ENSSSCG00000009000
Tissue enriched
Detected in some
pineal gland:
34.1
na
ENSSSCG00000009500
Claudin-10 precursor
Tissue enhanced
Detected in many
esophagus:
80.3
fallopian tube:
22.7
kidney:
25.1
upper respiratory system:
25.0
na
ENSSSCG00000010212
ENSG00000151150
Tissue enhanced
Detected in all
vagus nerve:
64.8
na
ENSSSCG00000010855
ENSG00000143811
Low tissue specificity
Detected in all
na
ENSSSCG00000011267
ENSG00000168314
Tissue enriched
Detected in some
brain:
414.6
na
ENSSSCG00000012100
ENSG00000006757
Patatin-like phospholipase domain-containing protein 4 precursor
Tissue enhanced
Detected in many
lens:
9.5
na
ENSSSCG00000012126
Tissue enhanced
Detected in many
brain:
107.7
vagus nerve:
58.1
na
ENSSSCG00000012319
Tissue enhanced
Detected in many
brain:
53.6
na
ENSSSCG00000012350
Tissue enhanced
Detected in many
ductus deferens:
20.8
epididymis:
42.4
na
ENSSSCG00000012517
Group enriched
Detected in some
brain:
13.0
pineal gland:
25.1
na
ENSSSCG00000012529
Low tissue specificity
Detected in many
na
ENSSSCG00000012530
Transcription elongation factor A protein-like 2
Tissue enhanced
Detected in many
ductus deferens:
31.3
epididymis:
16.2
pituitary gland:
21.3
na
ENSSSCG00000012627
Tissue enhanced
Detected in many
kidney:
12.2
testis:
12.3
na
ENSSSCG00000013341
ENSG00000187398
Group enriched
Detected in some
brain:
40.0
testis:
48.5
na
ENSSSCG00000013571
ENSG00000198723
Group enriched
Detected in some
brain:
11.0
testis:
15.2
upper respiratory system:
4.9
na
ENSSSCG00000013922
Tissue enriched
Detected in many
brain:
47.7
na
ENSSSCG00000013928
ENSG00000130283,ENSG00000223802
Tissue enhanced
Detected in many
brain:
43.4
vagus nerve:
18.8
na
ENSSSCG00000013990
ENSG00000143774
Tissue enhanced
Detected in all
retina:
114.9
na
ENSSSCG00000014143
Tissue enhanced
Detected in some
brain:
4.1
na
ENSSSCG00000014251
Tissue enhanced
Detected in all
brain:
23.9
ovary:
24.6
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