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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Subclass
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Biological process
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Keyword
Chromosome
1
2
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6
7
8
9
10
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12
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
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Lymphoid tissue
Male glands
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Mouth
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
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TECHNICAL DATA
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RELEASE HISTORY
826 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000039001
Tissue enhanced
Detected in many
thyroid gland:
17.9
na
ENSSSCG00000039142
Tissue enhanced
Detected in some
brain:
9.1
retina:
1.9
testis:
3.1
na
ENSSSCG00000039351
Tissue enhanced
Detected in all
brain:
65.2
na
ENSSSCG00000039374
Low tissue specificity
Detected in all
na
ENSSSCG00000039473
ENSG00000170832
Tissue enhanced
Detected in all
retina:
53.8
na
ENSSSCG00000039482
ENSG00000238210,ENSG00000283644
Tissue enriched
Detected in many
testis:
85.4
na
ENSSSCG00000039545
Low tissue specificity
Detected in all
na
ENSSSCG00000039562
ENSG00000180190
Testis development-related protein
Tissue enhanced
Detected in many
choroid plexus:
53.4
na
ENSSSCG00000039637
Group enriched
Detected in many
brain:
15.5
lens:
39.2
na
ENSSSCG00000039646
Group enriched
Detected in some
brain:
66.9
pineal gland:
18.4
na
ENSSSCG00000039680
Group enriched
Detected in many
brain:
16.5
pineal gland:
9.6
synovial tissue:
4.9
vagus nerve:
5.8
na
ENSSSCG00000039689
Tissue enhanced
Detected in many
brain:
15.3
vagus nerve:
19.5
na
ENSSSCG00000039860
Tissue enhanced
Detected in many
brain:
26.8
na
ENSSSCG00000040101
Low tissue specificity
Detected in all
na
ENSSSCG00000040159
Tissue enhanced
Detected in all
brain:
60.7
na
ENSSSCG00000040387
Tissue enhanced
Detected in many
brain:
15.4
lymphoid tissue:
15.1
pineal gland:
12.7
retina:
16.3
na
ENSSSCG00000040422
Tissue enhanced
Detected in all
brain:
28.1
na
ENSSSCG00000040515
Tissue enhanced
Detected in many
brain:
17.8
ductus deferens:
29.2
male glands:
47.1
vagus nerve:
19.8
na
ENSSSCG00000040778
ENSG00000170113
Tissue enriched
Detected in many
brain:
44.8
na
ENSSSCG00000040787
Tissue enhanced
Detected in some
brain:
6.0
pineal gland:
4.2
retina:
4.5
vagus nerve:
6.5
na
ENSSSCG00000040953
Tissue enhanced
Detected in many
choroid plexus:
19.1
NACAD
ENSSSCG00000016733
ENSG00000136274
NAC alpha domain containing
Tissue enriched
Detected in many
brain:
42.4
NAP1L3
ENSSSCG00000012504
ENSG00000186310
Nucleosome assembly protein 1 like 3
Tissue enhanced
Detected in many
brain:
52.8
NAPEPLD
ENSSSCG00000022903
ENSG00000161048
N-acyl phosphatidylethanolamine phospholipase D
Tissue enhanced
Detected in all
thyroid gland:
74.2
NAPG
ENSSSCG00000038533
ENSG00000134265
NSF attachment protein gamma
Low tissue specificity
Detected in all
NBEA
ENSSSCG00000034348
ENSG00000172915
Neurobeachin
Low tissue specificity
Detected in all
NCAM1
ENSSSCG00000015045
ENSG00000149294
Neural cell adhesion molecule 1
Tissue enhanced
Detected in many
brain:
63.8
lens:
39.5
NCS1
ENSSSCG00000039311
ENSG00000107130
Neuronal calcium sensor 1
Tissue enhanced
Detected in many
brain:
59.6
NDFIP1
ENSSSCG00000025295
ENSG00000131507
NEDD4 family-interacting protein 1 precursor
Tissue enhanced
Detected in all
brain:
74.5
NDP
ENSSSCG00000029656
ENSG00000124479
Norrin precursor
Tissue enhanced
Detected in many
brain:
31.8
pineal gland:
14.7
NDRG4
ENSSSCG00000021911
ENSG00000103034
NDRG family member 4
Tissue enhanced
Detected in many
brain:
86.8
cervix:
82.2
NDST4
ENSSSCG00000033834
ENSG00000138653
N-deacetylase and N-sulfotransferase 4
Tissue enhanced
Detected in some
brain:
32.2
ovary:
9.1
NEDD4L
ENSSSCG00000004919
ENSG00000049759
Neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
Low tissue specificity
Detected in all
NFASC
ENSSSCG00000022951
ENSG00000163531
Neurofascin
Tissue enhanced
Detected in some
brain:
47.9
pineal gland:
18.3
vagus nerve:
46.6
NIF3L1
ENSSSCG00000039654
ENSG00000196290
NGG1 interacting factor 3 like 1
Low tissue specificity
Detected in all
NIPAL3
ENSSSCG00000003543
ENSG00000001461
NIPA like domain containing 3
Low tissue specificity
Detected in all
NKAIN2
ENSSSCG00000036607
ENSG00000188580
Sodium/potassium transporting ATPase interacting 2
Tissue enriched
Detected in some
brain:
44.6
NKAIN3
ENSSSCG00000034894
ENSG00000185942
Sodium/potassium transporting ATPase interacting 3
Tissue enhanced
Detected in all
brain:
28.0
NKIRAS1
ENSSSCG00000024296
ENSG00000197885
NFKB inhibitor interacting Ras like 1
Tissue enhanced
Detected in all
brain:
37.2
lens:
30.9
NLGN3
ENSSSCG00000027465
ENSG00000196338
Neuroligin 3
Tissue enhanced
Detected in many
brain:
23.8
vagus nerve:
10.8
NMNAT2
ENSSSCG00000015557
ENSG00000157064
Nicotinamide nucleotide adenylyltransferase 2
Tissue enhanced
Detected in many
brain:
44.6
pituitary gland:
18.1
NNAT
ENSSSCG00000007336
ENSG00000053438
Neuronatin
Tissue enriched
Detected in many
pituitary gland:
708.6
NPAS3
ENSSSCG00000001964
ENSG00000151322
Neuronal PAS domain protein 3
Tissue enhanced
Detected in many
brain:
18.5
cartilage:
25.9
NR2F1
ENSSSCG00000014157
ENSG00000175745
Nuclear receptor subfamily 2 group F member 1
Low tissue specificity
Detected in many
NRCAM
ENSSSCG00000015445
ENSG00000091129
Neuronal cell adhesion molecule
Group enriched
Detected in many
brain:
39.3
epididymis:
51.9
lens:
124.8
NT5C3B
ENSSSCG00000034779
ENSG00000141698
5'-nucleotidase, cytosolic IIIB
Tissue enhanced
Detected in all
brain:
32.1
NTRK2
ENSSSCG00000010959
ENSG00000148053
Neurotrophic receptor tyrosine kinase 2
Tissue enhanced
Detected in many
brain:
63.2
cornea:
45.4
NTSR2
ENSSSCG00000008625
ENSG00000169006
Neurotensin receptor 2
Tissue enriched
Detected in some
brain:
20.1
NUDT16
ENSSSCG00000032424
ENSG00000198585
Nudix hydrolase 16
Low tissue specificity
Detected in all
NUDT3
ENSSSCG00000031593
ENSG00000272325
Nudix hydrolase 3
Low tissue specificity
Detected in all
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