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Chromosome
1
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8
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MT
Unmapped
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External id
Variability
Variable
Not variable
Tissue
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Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
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Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
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Esophagus
Fallopian tube
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Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
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477 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
NEK10
ENSSSCG00000011217
ENSG00000163491
NIMA related kinase 10
Tissue enhanced
Detected in many
fallopian tube:
24.2
lung:
17.1
testis:
14.7
upper respiratory system:
24.8
NEK11
ENSSSCG00000011181
ENSG00000114670
NIMA related kinase 11
Tissue enhanced
Detected in many
choroid plexus:
19.0
fallopian tube:
18.4
NEK5
ENSSSCG00000009380
ENSG00000197168
NIMA related kinase 5
Tissue enhanced
Detected in many
choroid plexus:
27.1
fallopian tube:
44.6
NME7
ENSSSCG00000006294
ENSG00000143156
NME/NM23 family member 7
Low tissue specificity
Detected in all
NME9
ENSSSCG00000037044
ENSG00000181322
NME/NM23 family member 9
Tissue enhanced
Detected in some
brain:
14.3
fallopian tube:
63.6
lung:
23.1
upper respiratory system:
22.5
NSUN7
ENSSSCG00000024496
ENSG00000179299
NOP2/Sun RNA methyltransferase family member 7
Tissue enhanced
Detected in some
choroid plexus:
16.3
testis:
46.9
upper respiratory system:
19.9
NUDT14
ENSSSCG00000002557
ENSG00000183828
Nudix hydrolase 14
Low tissue specificity
Detected in all
ODF3B
ENSSSCG00000000967
ENSG00000177989
Outer dense fiber protein 3B
Tissue enhanced
Detected in many
choroid plexus:
31.2
fallopian tube:
58.8
lung:
27.2
upper respiratory system:
52.3
OR10V1
ENSSSCG00000013122
ENSG00000172289
Olfactory receptor family 10 subfamily V member 1
Tissue enhanced
Detected in some
fallopian tube:
4.3
pineal gland:
2.5
OR2C1
ENSSSCG00000007959
ENSG00000168158
Olfactory receptor family 2 subfamily C member 1
Tissue enhanced
Detected in many
fallopian tube:
6.8
OVGP1
ENSSSCG00000006791
ENSG00000085465
Oviduct-specific glycoprotein precursor
Tissue enriched
Detected in single
fallopian tube:
113.4
PDCL2
ENSSSCG00000008908
ENSG00000163440
Phosducin like 2
Tissue enriched
Detected in some
testis:
56.9
PIH1D2
ENSSSCG00000015031
ENSG00000150773
PIH1 domain containing 2
Tissue enhanced
Detected in many
fallopian tube:
24.0
testis:
38.6
PIH1D3
ENSSSCG00000012558
ENSG00000080572
PIH1 domain containing 3
Tissue enhanced
Detected in some
choroid plexus:
17.1
fallopian tube:
9.3
testis:
18.0
upper respiratory system:
7.2
PIM2
ENSSSCG00000028964
ENSG00000102096
Pim-2 proto-oncogene, serine/threonine kinase
Tissue enhanced
Detected in all
ovary:
31.1
PLA2G2C
ENSSSCG00000003499
ENSG00000187980
Phospholipase A2 group IIC
Tissue enhanced
Detected in some
fallopian tube:
25.1
lung:
5.1
upper respiratory system:
6.3
POLR3G
ENSSSCG00000026233
ENSG00000113356
RNA polymerase III subunit G
Low tissue specificity
Detected in all
PPIL6
ENSSSCG00000004413
ENSG00000185250
Peptidyl-prolyl cis-trans isomerase-like 6
Tissue enhanced
Detected in some
choroid plexus:
34.3
fallopian tube:
41.8
testis:
27.2
upper respiratory system:
17.8
PPP1R32
ENSSSCG00000013081
ENSG00000162148
Protein phosphatase 1 regulatory subunit 32
Group enriched
Detected in some
testis:
85.6
upper respiratory system:
26.3
PPP1R42
ENSSSCG00000006204
ENSG00000178125
Protein phosphatase 1 regulatory subunit 42
Group enriched
Detected in many
choroid plexus:
10.5
testis:
31.6
PRSS54
ENSSSCG00000028587
ENSG00000103023
Serine protease 54
Tissue enriched
Detected in some
testis:
48.9
PTF1A
ENSSSCG00000030662
ENSG00000168267
Pancreas specific transcription factor, 1a
Tissue enhanced
Detected in some
fallopian tube:
2.4
kidney:
1.7
retina:
2.2
PUS7
ENSSSCG00000015428
ENSG00000091127
Pseudouridylate synthase 7 (putative)
Tissue enhanced
Detected in all
choroid plexus:
71.1
RARB
ENSSSCG00000011212
ENSG00000077092
Retinoic acid receptor beta
Low tissue specificity
Detected in all
RASSF9
ENSSSCG00000034948
ENSG00000198774
Ras association domain family member 9
Low tissue specificity
Detected in all
REM2
ENSSSCG00000031874
ENSG00000139890
RRAD and GEM like GTPase 2
Low tissue specificity
Detected in all
RGS22
ENSSSCG00000006069
ENSG00000132554
Regulator of G protein signaling 22
Tissue enhanced
Detected in many
testis:
50.3
upper respiratory system:
21.4
RGSL1
ENSSSCG00000015548
ENSG00000121446
Regulator of G protein signaling like 1
Group enriched
Detected in many
epididymis:
40.1
testis:
14.4
RHPN1
ENSSSCG00000006957
ENSG00000158106
Rhophilin Rho GTPase binding protein 1
Tissue enhanced
Detected in many
fallopian tube:
10.7
kidney:
15.2
small intestine:
11.2
upper respiratory system:
12.1
RIBC2
ENSSSCG00000024718
ENSG00000128408
RIB43A domain with coiled-coils 2
Tissue enhanced
Detected in some
fallopian tube:
23.1
lung:
8.4
testis:
8.2
upper respiratory system:
25.3
RIIAD1
ENSSSCG00000040872
ENSG00000178796
RIIa domain-containing protein 1
Tissue enhanced
Detected in many
choroid plexus:
19.5
pineal gland:
24.8
testis:
27.2
RLN3
ENSSSCG00000013765
ENSG00000171136
Relaxin-3 Relaxin-3 B chain Relaxin-3 A chain
Tissue enhanced
Detected in many
brain:
33.5
RNF183
ENSSSCG00000027688
ENSG00000165188
Ring finger protein 183
Tissue enhanced
Detected in many
kidney:
22.7
RNF32
ENSSSCG00000016414
ENSG00000105982
Ring finger protein 32
Tissue enriched
Detected in all
testis:
56.1
ROPN1L
ENSSSCG00000022306
ENSG00000145491
Rhophilin associated tail protein 1 like
Tissue enhanced
Detected in many
fallopian tube:
54.9
testis:
67.2
upper respiratory system:
36.0
RPGRIP1L
ENSSSCG00000031652
ENSG00000103494
RPGRIP1 like
Low tissue specificity
Detected in all
RSPH14
ENSSSCG00000010047
ENSG00000100218
Radial spoke head 14 homolog
Tissue enhanced
Detected in some
fallopian tube:
16.3
lung:
13.4
testis:
12.2
upper respiratory system:
39.2
RSPH6A
ENSSSCG00000040714
ENSG00000104941
Radial spoke head 6 homolog A
Tissue enriched
Detected in some
testis:
48.2
RSPH9
ENSSSCG00000001691
ENSG00000172426
Radial spoke head 9 homolog
Tissue enhanced
Detected in many
testis:
31.1
RUVBL2
ENSSSCG00000003152
ENSG00000183207
RuvB-like 2
Low tissue specificity
Detected in all
SAMD15
ENSSSCG00000002400
ENSG00000100583
Sterile alpha motif domain containing 15
Tissue enhanced
Detected in many
fallopian tube:
29.3
testis:
46.2
upper respiratory system:
21.6
SAXO2
ENSSSCG00000031963
ENSG00000188659
Stabilizer of axonemal microtubules 2
Tissue enhanced
Detected in all
fallopian tube:
25.3
upper respiratory system:
26.2
SCGB3A1
ENSSSCG00000014008
ENSG00000161055
Secretoglobin family 3A member 1
Group enriched
Detected in some
lung:
32.5
upper respiratory system:
88.8
SEC14L3
ENSSSCG00000010008
ENSG00000100012
SEC14 like lipid binding 3
Group enriched
Detected in some
liver:
95.0
lung:
24.7
upper respiratory system:
44.8
SEC14L4
ENSSSCG00000038709
ENSG00000133488
SEC14 like lipid binding 4
Tissue enhanced
Detected in some
fallopian tube:
5.6
liver:
15.9
lung:
15.4
SERPINI2
ENSSSCG00000011737
ENSG00000114204
Serpin family I member 2
Tissue enhanced
Detected in some
brain:
9.4
fallopian tube:
39.2
upper respiratory system:
13.2
vagus nerve:
10.0
SHISAL2A
ENSSSCG00000034127
ENSG00000182183
Shisa like 2A
Tissue enhanced
Detected in many
kidney:
12.5
testis:
44.1
SIX3
ENSSSCG00000039283
ENSG00000138083
SIX homeobox 3
Group enriched
Detected in some
brain:
16.8
lens:
51.1
pituitary gland:
42.1
retina:
28.4
upper respiratory system:
33.6
SLC47A1
ENSSSCG00000033329
ENSG00000142494
Solute carrier family 47 member 1
Tissue enhanced
Detected in all
dura mater:
44.3
kidney:
26.8
SMKR1
ENSSSCG00000025967
ENSG00000240204
Small lysine rich protein 1
Tissue enriched
Detected in many
testis:
165.1
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