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Gene name
Human disease related genes
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Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
Class
Cancers
Cardiovascular diseases
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Endocrine and metabolic diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
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THE PROJECT
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RELEASE HISTORY
836 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000011003
ENSG00000165264
NADH dehydrogenase
Tissue enhanced
Detected in all
skeletal muscle:
60.4
na
ENSSSCG00000011764
ENSG00000136521
Tissue enhanced
Detected in all
skeletal muscle:
29.8
na
ENSSSCG00000011893
Low tissue specificity
Detected in all
na
ENSSSCG00000012046
ENSG00000205670,ENSG00000273590
Tissue enhanced
Detected in all
lens:
46.7
skeletal muscle:
58.1
na
ENSSSCG00000012174
ENSG00000184831
Low tissue specificity
Detected in all
na
ENSSSCG00000012578
Low tissue specificity
Detected in all
na
ENSSSCG00000012961
Low tissue specificity
Detected in all
na
ENSSSCG00000013038
ENSG00000110011
Low tissue specificity
Detected in all
na
ENSSSCG00000013436
ENSG00000127540
Tissue enhanced
Detected in all
heart:
76.9
skeletal muscle:
85.2
na
ENSSSCG00000013596
ENSG00000267855
Tissue enhanced
Detected in all
lens:
122.1
na
ENSSSCG00000013721
ENSG00000105583
Protein Asterix
Tissue enhanced
Detected in all
lens:
56.7
na
ENSSSCG00000014013
ENSG00000113269
Low tissue specificity
Detected in all
na
ENSSSCG00000014060
ENSG00000122203
Putative monooxygenase p33MONOX
Tissue enhanced
Detected in all
male glands:
113.7
na
ENSSSCG00000014250
ENSG00000164241
Low tissue specificity
Detected in all
na
ENSSSCG00000014296
Voltage-dependent anion-selective channel protein 1
Tissue enhanced
Detected in all
skeletal muscle:
117.6
na
ENSSSCG00000014371
ENSG00000131495
Low tissue specificity
Detected in all
na
ENSSSCG00000014540
Ferritin heavy chain
Low tissue specificity
Detected in all
na
ENSSSCG00000015040
ENSG00000150787
Low tissue specificity
Detected in all
na
ENSSSCG00000015066
ENSG00000109917
Low tissue specificity
Detected in all
na
ENSSSCG00000016100
ENSG00000119013
Low tissue specificity
Detected in all
na
ENSSSCG00000016211
ENSG00000198925
Autophagy-related protein 9A
Tissue enhanced
Detected in all
testis:
89.5
na
ENSSSCG00000016982
ENSG00000145919,ENSG00000228075
Low tissue specificity
Detected in all
na
ENSSSCG00000017239
ENSG00000172809
Tissue enhanced
Detected in all
male glands:
300.6
na
ENSSSCG00000017544
ENSG00000159199
ATP synthase F(0) complex subunit C1, mitochondrial
Tissue enhanced
Detected in all
heart:
72.2
skeletal muscle:
72.6
na
ENSSSCG00000017796
ENSG00000108578
Low tissue specificity
Detected in all
na
ENSSSCG00000017928
ENSG00000161939,ENSG00000258315
Low tissue specificity
Detected in all
na
ENSSSCG00000018034
Tissue enriched
Detected in all
testis:
105.1
na
ENSSSCG00000020934
ENSG00000176797,ENSG00000177243
Prepro-beta-defensin 3 precursor
Tissue enhanced
Detected in many
testis:
15.9
na
ENSSSCG00000021325
ENSG00000180398
Low tissue specificity
Detected in all
na
ENSSSCG00000021427
ENSG00000132912
Dynactin subunit 4
Low tissue specificity
Detected in all
na
ENSSSCG00000021941
ENSG00000166529
Low tissue specificity
Detected in all
na
ENSSSCG00000022032
ENSG00000153936,ENSG00000267561
Low tissue specificity
Detected in all
na
ENSSSCG00000022058
ENSG00000138085
Low tissue specificity
Detected in all
na
ENSSSCG00000022164
ENSG00000160207
Tissue enhanced
Detected in all
testis:
52.4
na
ENSSSCG00000022358
ENSG00000157869
Ras-related protein Rab-28
Low tissue specificity
Detected in all
na
ENSSSCG00000022864
ENSG00000242372
Eukaryotic translation initiation factor 6
Low tissue specificity
Detected in all
na
ENSSSCG00000023091
Low tissue specificity
Detected in all
na
ENSSSCG00000023139
ENSG00000181038
Tissue enhanced
Detected in all
lens:
36.1
na
ENSSSCG00000023263
ENSG00000278845
Tissue enriched
Detected in all
lens:
89.4
na
ENSSSCG00000023277
ENSG00000125356
Tissue enhanced
Detected in all
pineal gland:
87.3
na
ENSSSCG00000023643
ENSG00000131828
Tissue enhanced
Detected in all
kidney:
136.6
skeletal muscle:
65.8
na
ENSSSCG00000023818
ENSG00000113048
Low tissue specificity
Detected in all
na
ENSSSCG00000024242
ENSG00000183617
Tissue enhanced
Detected in all
lens:
48.0
na
ENSSSCG00000024313
Cytochrome c oxidase subunit NDUFA4
Tissue enhanced
Detected in all
heart:
113.1
skeletal muscle:
155.2
na
ENSSSCG00000025060
ENSG00000106591
Low tissue specificity
Detected in all
na
ENSSSCG00000025192
60S ribosomal protein L9
Low tissue specificity
Detected in all
na
ENSSSCG00000025673
ENSG00000101363
Low tissue specificity
Detected in all
na
ENSSSCG00000026229
Low tissue specificity
Detected in all
na
ENSSSCG00000027085
ENSG00000169021
Tissue enhanced
Detected in all
heart:
85.5
skeletal muscle:
90.3
na
ENSSSCG00000027491
ENSG00000106603
Low tissue specificity
Detected in all
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