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Gene name
Human disease related genes
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UMAP gene cluster
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Keyword
Chromosome
1
2
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9
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MT
Unmapped
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Male glands
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
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THE PROJECT
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RELEASE HISTORY
836 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
UNC119B
ENSSSCG00000020716
ENSG00000175970
Unc-119 lipid binding chaperone B
Low tissue specificity
Detected in all
UQCC1
ENSSSCG00000038237
ENSG00000101019
Ubiquinol-cytochrome c reductase complex chaperone CBP3 homolog
Low tissue specificity
Detected in all
UQCC2
ENSSSCG00000030668
ENSG00000137288
Uncharacterized protein LOC100153818
Tissue enhanced
Detected in all
skeletal muscle:
46.1
UQCR10
ENSSSCG00000024550
ENSG00000184076
Cytochrome b-c1 complex subunit 9
Tissue enhanced
Detected in all
skeletal muscle:
106.0
UQCRC1
ENSSSCG00000011356
ENSG00000010256
Ubiquinol-cytochrome c reductase core protein 1
Tissue enhanced
Detected in all
heart:
101.2
skeletal muscle:
104.1
UQCRC2
ENSSSCG00000007845
ENSG00000140740
Ubiquinol-cytochrome c reductase core protein 2
Tissue enhanced
Detected in all
skeletal muscle:
72.0
UQCRQ
ENSSSCG00000014289
ENSG00000164405
Ubiquinol-cytochrome c reductase complex III subunit VII
Tissue enhanced
Detected in all
choroid plexus:
69.6
heart:
66.3
skeletal muscle:
67.5
URM1
ENSSSCG00000005649
ENSG00000167118
Ubiquitin-related modifier 1
Low tissue specificity
Detected in all
UROS
ENSSSCG00000010742
ENSG00000188690
Uroporphyrinogen-III synthase isoform 2
Low tissue specificity
Detected in all
USE1
ENSSSCG00000013875
ENSG00000053501
Unconventional SNARE in the ER 1
Low tissue specificity
Detected in all
USF2
ENSSSCG00000002885
ENSG00000105698
Upstream transcription factor 2, c-fos interacting
Low tissue specificity
Detected in all
UVRAG
ENSSSCG00000028979
ENSG00000198382
UV radiation resistance associated
Tissue enhanced
Detected in all
adrenal gland:
75.3
UXS1
ENSSSCG00000008143
ENSG00000115652
UDP-glucuronic acid decarboxylase 1 isoform a
Low tissue specificity
Detected in all
VAPA
ENSSSCG00000038465
ENSG00000101558
VAMP associated protein A
Tissue enhanced
Detected in all
skeletal muscle:
82.1
VAPB
ENSSSCG00000007514
ENSG00000124164
Vesicle-associated membrane protein-associated protein B
Low tissue specificity
Detected in all
VCP
ENSSSCG00000005300
ENSG00000165280
Transitional endoplasmic reticulum ATPase
Low tissue specificity
Detected in all
VDAC3
ENSSSCG00000007026
ENSG00000078668
Voltage-dependent anion-selective channel protein 3
Tissue enhanced
Detected in all
skeletal muscle:
79.2
testis:
70.9
VPS11
ENSSSCG00000015107
ENSG00000160695
VPS11, CORVET/HOPS core subunit
Low tissue specificity
Detected in all
VPS51
ENSSSCG00000013005
ENSG00000149823
VPS51, GARP complex subunit
Low tissue specificity
Detected in all
VPS72
ENSSSCG00000031869
ENSG00000163159
Vacuolar protein sorting 72 homolog
Low tissue specificity
Detected in all
WDFY1
ENSSSCG00000025174
ENSG00000085449
WD repeat and FYVE domain-containing protein 1
Low tissue specificity
Detected in all
WWP1
ENSSSCG00000006137
ENSG00000123124
WW domain containing E3 ubiquitin protein ligase 1
Tissue enhanced
Detected in all
skeletal muscle:
59.8
XPNPEP1
ENSSSCG00000010620
ENSG00000108039
X-prolyl aminopeptidase 1
Low tissue specificity
Detected in all
YIF1B
ENSSSCG00000002952
ENSG00000167645
Protein YIF1B
Low tissue specificity
Detected in all
ZBTB5
ENSSSCG00000036340
ENSG00000168795
Zinc finger and BTB domain containing 5
Low tissue specificity
Detected in all
ZCCHC4
ENSSSCG00000028581
ENSG00000168228
Zinc finger CCHC-type containing 4
Low tissue specificity
Detected in all
ZKSCAN1
ENSSSCG00000031461
ENSG00000106261
Zinc finger with KRAB and SCAN domains 1
Tissue enhanced
Detected in all
cartilage:
82.8
salivary gland:
59.8
ZMAT5
ENSSSCG00000024279
ENSG00000100319
Zinc finger matrin-type 5
Low tissue specificity
Detected in all
ZMYND19
ENSSSCG00000039592
ENSG00000165724
Zinc finger MYND-type containing 19
Low tissue specificity
Detected in all
ZNF106
ENSSSCG00000004725
ENSG00000103994
Zinc finger protein 106
Group enriched
Detected in all
heart:
118.8
lens:
48.1
skeletal muscle:
102.3
ZNF227
ENSSSCG00000033420
ENSG00000131115
Zinc finger protein 227
Low tissue specificity
Detected in all
ZNF277
ENSSSCG00000025910
ENSG00000198839
Zinc finger protein 277
Low tissue specificity
Detected in all
ZNF329
ENSSSCG00000023027
ENSG00000181894
Zinc finger protein 329
Low tissue specificity
Detected in all
ZNF358
ENSSSCG00000025078
ENSG00000198816
Zinc finger protein 358
Low tissue specificity
Detected in all
ZNF574
ENSSSCG00000003037
ENSG00000105732
Zinc finger protein 574
Tissue enhanced
Detected in all
testis:
52.4
ZNHIT1
ENSSSCG00000033982
ENSG00000106400
Zinc finger HIT-type containing 1
Low tissue specificity
Detected in all
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