We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
161 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 4 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000037584
Tissue enhanced
Detected in some
ovary:
3.9
na
ENSSSCG00000037889
Group enriched
Detected in some
brain:
26.3
choroid plexus:
7.8
na
ENSSSCG00000037966
Low tissue specificity
Detected in many
na
ENSSSCG00000038101
ENSG00000186094
Tissue enhanced
Detected in many
brain:
11.2
choroid plexus:
12.8
pituitary gland:
12.2
retina:
10.5
testis:
16.5
na
ENSSSCG00000038183
ENSG00000186458
Tissue enriched
Detected in some
choroid plexus:
73.3
na
ENSSSCG00000038818
Tissue enhanced
Detected in many
choroid plexus:
39.6
fallopian tube:
33.7
lymphoid tissue:
34.4
testis:
35.8
na
ENSSSCG00000038827
Tissue enhanced
Detected in many
skin:
13.7
na
ENSSSCG00000038981
Tissue enhanced
Detected in some
brain:
3.6
pineal gland:
4.0
pituitary gland:
2.1
upper respiratory system:
2.6
na
ENSSSCG00000038997
Group enriched
Detected in some
brain:
10.1
choroid plexus:
6.6
dura mater:
7.8
pineal gland:
3.1
skeletal muscle:
2.8
na
ENSSSCG00000039140
Tissue enhanced
Detected in many
choroid plexus:
15.4
na
ENSSSCG00000039145
Tissue enriched
Detected in some
epididymis:
242.1
na
ENSSSCG00000039827
Tissue enhanced
Detected in some
brain:
3.3
choroid plexus:
3.1
cornea:
2.1
dura mater:
2.6
pineal gland:
2.8
na
ENSSSCG00000039879
Tissue enhanced
Detected in some
brain:
6.9
lung:
9.8
stomach:
18.2
testis:
14.7
na
ENSSSCG00000040040
Tissue enhanced
Detected in many
testis:
17.3
na
ENSSSCG00000040338
Tissue enriched
Detected in some
choroid plexus:
40.2
na
ENSSSCG00000040416
ENSG00000174483,ENSG00000256349
Low tissue specificity
Detected in all
na
ENSSSCG00000040892
Tissue enhanced
Detected in many
brain:
8.2
choroid plexus:
20.4
NEK4
ENSSSCG00000011446
ENSG00000114904
NIMA related kinase 4
Low tissue specificity
Detected in all
NKAPL
ENSSSCG00000001205
ENSG00000189134
NFKB activating protein like
Tissue enriched
Detected in some
testis:
43.1
NME5
ENSSSCG00000027997
ENSG00000112981
NME/NM23 family member 5
Tissue enhanced
Detected in many
choroid plexus:
23.6
fallopian tube:
22.8
pineal gland:
25.4
NPHP1
ENSSSCG00000008111
ENSG00000144061
Nephrocystin 1
Tissue enhanced
Detected in all
testis:
55.1
NPM2
ENSSSCG00000009610
ENSG00000158806
Nucleoplasmin-2
Tissue enhanced
Detected in many
epididymis:
11.0
OSCP1
ENSSSCG00000036709
ENSG00000116885
Organic solute carrier partner 1
Tissue enhanced
Detected in many
choroid plexus:
26.6
OTX1
ENSSSCG00000037564
ENSG00000115507
Orthodenticle homeobox 1
Tissue enhanced
Detected in some
cornea:
21.2
mouth:
13.5
upper respiratory system:
24.4
P2RX2
ENSSSCG00000009735
ENSG00000187848
Purinergic receptor P2X 2
Tissue enhanced
Detected in many
male glands:
19.7
pituitary gland:
24.4
PACRG
ENSSSCG00000038153
ENSG00000112530
Parkin coregulated
Tissue enhanced
Detected in many
testis:
37.0
PACRGL
ENSSSCG00000008750
ENSG00000163138
Parkin coregulated like
Tissue enhanced
Detected in all
testis:
29.2
PCM1
ENSSSCG00000006994
ENSG00000078674
Pericentriolar material 1
Low tissue specificity
Detected in all
PCNX4
ENSSSCG00000005082
ENSG00000126773
Pecanex homolog 4
Low tissue specificity
Detected in all
QPCT
ENSSSCG00000008491
ENSG00000115828
Glutaminyl-peptide cyclotransferase
Tissue enhanced
Detected in many
adrenal gland:
70.4
pituitary gland:
28.7
RAB36
ENSSSCG00000010048
ENSG00000100228
RAB36, member RAS oncogene family
Low tissue specificity
Detected in many
RFX3
ENSSSCG00000005225
ENSG00000080298
Regulatory factor X3
Tissue enhanced
Detected in all
brain:
40.2
RNASE10
ENSSSCG00000002134
ENSG00000182545
Inactive ribonuclease-like protein 10
Group enriched
Detected in many
brain:
7.1
choroid plexus:
5.0
epididymis:
20.0
fallopian tube:
12.0
RSG1
ENSSSCG00000003473
ENSG00000132881
REM2 and RAB like small GTPase 1
Tissue enhanced
Detected in many
choroid plexus:
15.0
lens:
18.4
SEMA3E
ENSSSCG00000015399
ENSG00000170381
Semaphorin 3E
Tissue enhanced
Detected in many
choroid plexus:
35.4
SESN2
ENSSSCG00000029438
ENSG00000130766
Sestrin 2
Low tissue specificity
Detected in all
SIAE
ENSSSCG00000015196
ENSG00000110013
Sialic acid acetylesterase
Low tissue specificity
Detected in all
SLC29A4
ENSSSCG00000027768
ENSG00000164638
Solute carrier family 29 member 4
Tissue enhanced
Detected in many
adrenal gland:
17.6
brain:
17.6
SLC2A8
ENSSSCG00000005610
ENSG00000136856
Solute carrier family 2 member 8
Tissue enhanced
Detected in all
epididymis:
25.8
testis:
28.2
SLC39A3
ENSSSCG00000033968
ENSG00000141873
Solute carrier family 39 member 3
Tissue enhanced
Detected in all
epididymis:
53.8
SLC9C2
ENSSSCG00000015489
ENSG00000162753
Solute carrier family 9 member C2 (putative)
Tissue enhanced
Detected in many
epididymis:
16.9
testis:
34.2
SOX12
ENSSSCG00000021920
ENSG00000177732
SRY-box 12
Tissue enhanced
Detected in many
epididymis:
44.5
SPATA7
ENSSSCG00000002424
ENSG00000042317
Spermatogenesis-associated protein 7
Tissue enriched
Detected in all
testis:
114.1
STK31
ENSSSCG00000016719
ENSG00000196335
Serine/threonine kinase 31
Tissue enhanced
Detected in many
testis:
30.1
STRA6
ENSSSCG00000001909
ENSG00000137868
Stimulated by retinoic acid 6
Tissue enhanced
Detected in many
kidney:
79.5
lens:
35.1
STRBP
ENSSSCG00000005582
ENSG00000165209
Spermatid perinuclear RNA binding protein
Low tissue specificity
Detected in all
TCTN1
ENSSSCG00000009826
ENSG00000204852
Tectonic family member 1
Tissue enhanced
Detected in all
choroid plexus:
36.2
TMEM138
ENSSSCG00000037843
ENSG00000149483
Transmembrane protein 138
Low tissue specificity
Detected in all
TMEM17
ENSSSCG00000026713
ENSG00000186889
Transmembrane protein 17
Tissue enhanced
Detected in all
choroid plexus:
25.1
TMEM67
ENSSSCG00000006108
ENSG00000164953
Transmembrane protein 67
Low tissue specificity
Detected in all
« prev
| Page
of 4 |
next »
MENU
