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Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Chromosome
1
2
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8
9
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Male glands
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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2003 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
YWHAQ
ENSSSCG00000008638
ENSG00000134308
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta
Tissue enhanced
Detected in all
brain:
86.5
ZBED5
ENSSSCG00000033411
ENSG00000236287
Zinc finger BED-type containing 5
Low tissue specificity
Detected in all
ZBED8
ENSSSCG00000038662
ENSG00000221886
Zinc finger BED-type containing 8
Low tissue specificity
Detected in all
ZBTB26
ENSSSCG00000032575
ENSG00000171448
Zinc finger and BTB domain containing 26
Low tissue specificity
Detected in all
ZBTB33
ENSSSCG00000012608
ENSG00000177485
Zinc finger and BTB domain containing 33
Low tissue specificity
Detected in all
ZBTB44
ENSSSCG00000015247
ENSG00000196323
Zinc finger and BTB domain containing 44
Low tissue specificity
Detected in all
ZBTB6
ENSSSCG00000005576
ENSG00000186130
Zinc finger and BTB domain containing 6
Low tissue specificity
Detected in all
ZC3H15
ENSSSCG00000016026
ENSG00000065548
Zinc finger CCCH-type containing 15
Low tissue specificity
Detected in all
ZC3H6
ENSSSCG00000008096
ENSG00000188177
Zinc finger CCCH-type containing 6
Low tissue specificity
Detected in all
ZCCHC17
ENSSSCG00000031639
ENSG00000121766
Zinc finger CCHC-type containing 17
Low tissue specificity
Detected in all
ZDHHC2
ENSSSCG00000006982
ENSG00000104219
Zinc finger DHHC-type containing 2
Tissue enhanced
Detected in many
brain:
33.2
lens:
45.5
male glands:
35.6
vagus nerve:
31.8
ZDHHC21
ENSSSCG00000035730
ENSG00000175893
Zinc finger DHHC-type containing 21
Tissue enhanced
Detected in many
brain:
24.9
ZDHHC6
ENSSSCG00000010635
ENSG00000023041
Zinc finger DHHC-type containing 6
Tissue enhanced
Detected in all
male glands:
53.8
ZFAND1
ENSSSCG00000024780
ENSG00000104231
Zinc finger AN1-type containing 1
Low tissue specificity
Detected in all
ZFR
ENSSSCG00000027681
ENSG00000056097
Zinc finger RNA binding protein
Low tissue specificity
Detected in all
ZHX1
ENSSSCG00000005984
ENSG00000165156
Zinc fingers and homeoboxes 1
Low tissue specificity
Detected in all
ZKSCAN8
ENSSSCG00000001201
ENSG00000198315
Zinc finger with KRAB and SCAN domains 8
Low tissue specificity
Detected in all
ZMAT2
ENSSSCG00000029158
ENSG00000146007
Zinc finger matrin-type 2
Low tissue specificity
Detected in all
ZMAT3
ENSSSCG00000033860
ENSG00000172667
Zinc finger matrin-type 3
Tissue enhanced
Detected in all
brain:
28.4
ZMPSTE24
ENSSSCG00000027902
ENSG00000084073
Zinc metallopeptidase STE24
Low tissue specificity
Detected in all
ZMYM4
ENSSSCG00000003627
ENSG00000146463
Zinc finger MYM-type containing 4
Low tissue specificity
Detected in all
ZNF10
ENSSSCG00000033616
ENSG00000256223
Zinc finger protein 10
Low tissue specificity
Detected in all
ZNF112
ENSSSCG00000003077
ENSG00000062370
Zinc finger protein 112
Low tissue specificity
Detected in all
ZNF134
ENSSSCG00000003984
ENSG00000213762
Zinc finger protein 134
Low tissue specificity
Detected in all
ZNF140
ENSSSCG00000032144
ENSG00000196387
Zinc finger protein 140
Low tissue specificity
Detected in all
ZNF148
ENSSSCG00000011858
ENSG00000163848
Zinc finger protein 148
Low tissue specificity
Detected in all
ZNF189
ENSSSCG00000034239
ENSG00000136870
Zinc finger protein 189
Tissue enhanced
Detected in all
brain:
34.1
ZNF24
ENSSSCG00000023276
ENSG00000172466
Zinc finger protein 24
Low tissue specificity
Detected in all
ZNF260
ENSSSCG00000002930
ENSG00000254004
Zinc finger protein 260
Low tissue specificity
Detected in all
ZNF317
ENSSSCG00000032506
ENSG00000130803
Zinc finger protein 317
Low tissue specificity
Detected in all
ZNF32
ENSSSCG00000010416
ENSG00000169740
Zinc finger protein 32
Low tissue specificity
Detected in all
ZNF322
ENSSSCG00000001156
ENSG00000181315
Zinc finger protein 322
Low tissue specificity
Detected in all
ZNF326
ENSSSCG00000038253
ENSG00000162664
Zinc finger protein 326
Low tissue specificity
Detected in all
ZNF35
ENSSSCG00000032080
ENSG00000169981
Zinc finger protein 35
Low tissue specificity
Detected in all
ZNF383
ENSSSCG00000021946
ENSG00000188283
Zinc finger protein 383
Low tissue specificity
Detected in all
ZNF404
ENSSSCG00000003071
ENSG00000176222
Zinc finger protein 404
Low tissue specificity
Detected in all
ZNF527
ENSSSCG00000021741
ENSG00000189164
Zinc finger protein 527
Low tissue specificity
Detected in all
ZNF558
ENSSSCG00000029035
ENSG00000167785
Zinc finger protein 558
Low tissue specificity
Detected in all
ZNF570
ENSSSCG00000031612
ENSG00000171827
Zinc finger protein 570
Low tissue specificity
Detected in all
ZNF580
ENSSSCG00000031349
ENSG00000213015
Zinc finger protein 580
Low tissue specificity
Detected in all
ZNF599
ENSSSCG00000035876
ENSG00000153896
Zinc finger protein 599
Low tissue specificity
Detected in many
ZNF638
ENSSSCG00000022708
ENSG00000075292
Zinc finger protein 638
Low tissue specificity
Detected in all
ZNF639
ENSSSCG00000038443
ENSG00000121864
Zinc finger protein 639
Low tissue specificity
Detected in all
ZNF644
ENSSSCG00000022534
ENSG00000122482
Zinc finger protein 644
Low tissue specificity
Detected in all
ZNF649
ENSSSCG00000038927
ENSG00000198093
Zinc finger protein 649
Low tissue specificity
Detected in all
ZNF654
ENSSSCG00000036885
ENSG00000175105
Zinc finger protein 654
Low tissue specificity
Detected in all
ZNF664
ENSSSCG00000032962
ENSG00000179195
Zinc finger protein 664
Low tissue specificity
Detected in all
ZNF706
ENSSSCG00000006061
ENSG00000120963
Zinc finger protein 706
Low tissue specificity
Detected in all
ZNF770
ENSSSCG00000004799
ENSG00000198146
Zinc finger protein 770
Low tissue specificity
Detected in all
ZNF791
ENSSSCG00000029347
ENSG00000173875
Zinc finger protein 791
Tissue enhanced
Detected in all
liver:
24.0
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