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Gene name
Human disease related genes
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External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
Class
Cancers
Cardiovascular diseases
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Endocrine and metabolic diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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2003 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000008383
Low tissue specificity
Detected in all
na
ENSSSCG00000008433
Tissue enhanced
Detected in all
brain:
178.2
male glands:
222.0
na
ENSSSCG00000008898
ENSG00000171476
Homeodomain-only protein
Tissue enhanced
Detected in many
cornea:
62.1
lens:
122.1
na
ENSSSCG00000009069
ENSG00000151470
Low tissue specificity
Detected in all
na
ENSSSCG00000009241
ENSG00000138663
COP9 signalosome complex subunit 4
Low tissue specificity
Detected in all
na
ENSSSCG00000009746
Tissue enhanced
Detected in all
lens:
77.2
na
ENSSSCG00000009770
ENSG00000111361
Low tissue specificity
Detected in all
na
ENSSSCG00000009772
ENSG00000086598
Tissue enhanced
Detected in all
male glands:
135.4
na
ENSSSCG00000009775
Cyclin-dependent kinase 2-associated protein 1
Low tissue specificity
Detected in all
na
ENSSSCG00000009788
ENSG00000139726
Low tissue specificity
Detected in all
na
ENSSSCG00000009851
Tissue enhanced
Detected in all
lens:
129.1
na
ENSSSCG00000009967
ENSG00000180957
Low tissue specificity
Detected in all
na
ENSSSCG00000010029
Low tissue specificity
Detected in all
na
ENSSSCG00000010064
Glutathione S-transferase theta-1
Tissue enhanced
Detected in many
epididymis:
65.1
male glands:
32.3
na
ENSSSCG00000010440
Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN
Low tissue specificity
Detected in all
na
ENSSSCG00000010489
Low tissue specificity
Detected in all
na
ENSSSCG00000010560
ENSG00000055950
Low tissue specificity
Detected in all
na
ENSSSCG00000010669
ENSG00000165650
Low tissue specificity
Detected in all
na
ENSSSCG00000010674
ENSG00000165669
Protein FAM204A
Low tissue specificity
Detected in all
na
ENSSSCG00000010734
ENSG00000065154
Ornithine aminotransferase, mitochondrial
Low tissue specificity
Detected in all
na
ENSSSCG00000011077
ENSG00000148450
Low tissue specificity
Detected in all
na
ENSSSCG00000011081
ENSG00000168283,ENSG00000269897
Polycomb complex protein BMI-1
Low tissue specificity
Detected in all
na
ENSSSCG00000011290
Tissue enhanced
Detected in all
brain:
37.1
pineal gland:
44.4
na
ENSSSCG00000011410
ENSG00000114395
Low tissue specificity
Detected in all
na
ENSSSCG00000011465
ENSG00000174840
Low tissue specificity
Detected in all
na
ENSSSCG00000011506
ENSG00000144744
Low tissue specificity
Detected in all
na
ENSSSCG00000011531
ENSG00000170364
Low tissue specificity
Detected in all
na
ENSSSCG00000011565
Low tissue specificity
Detected in all
na
ENSSSCG00000011567
ENSG00000134086
Low tissue specificity
Detected in all
na
ENSSSCG00000011601
U6 snRNA-associated Sm-like protein LSm3
Low tissue specificity
Detected in all
na
ENSSSCG00000011676
ENSG00000069849
Tissue enhanced
Detected in all
lens:
73.1
na
ENSSSCG00000011772
ENSG00000058063
Low tissue specificity
Detected in all
na
ENSSSCG00000011803
Eukaryotic initiation factor 4A-II
Low tissue specificity
Detected in all
na
ENSSSCG00000011903
ENSG00000121578
Low tissue specificity
Detected in many
na
ENSSSCG00000012166
Tissue enhanced
Detected in all
pineal gland:
90.7
na
ENSSSCG00000012348
ENSG00000169188
Low tissue specificity
Detected in all
na
ENSSSCG00000012382
ENSG00000089289,ENSG00000266826
Tissue enhanced
Detected in all
lens:
47.9
na
ENSSSCG00000012470
Tissue enhanced
Detected in all
lens:
45.7
na
ENSSSCG00000012508
ENSG00000198960
Low tissue specificity
Detected in all
na
ENSSSCG00000012523
ENSG00000180964
Low tissue specificity
Detected in all
na
ENSSSCG00000012560
ENSG00000229937
Low tissue specificity
Detected in all
na
ENSSSCG00000012686
ENSG00000101928
Motile sperm domain-containing protein 1
Tissue enhanced
Detected in all
choroid plexus:
44.7
male glands:
52.0
na
ENSSSCG00000012746
ENSG00000160131
Low tissue specificity
Detected in all
na
ENSSSCG00000012757
ENSG00000147400
Low tissue specificity
Detected in all
na
ENSSSCG00000012811
Prefoldin subunit 3
Low tissue specificity
Detected in all
na
ENSSSCG00000013046
ENSG00000176340
Low tissue specificity
Detected in all
na
ENSSSCG00000013052
ENSG00000133318
Tissue enhanced
Detected in all
brain:
84.1
na
ENSSSCG00000013155
ENSG00000186660
Low tissue specificity
Detected in all
na
ENSSSCG00000013232
ENSG00000109919
Low tissue specificity
Detected in all
na
ENSSSCG00000013315
ENSG00000149100
Low tissue specificity
Detected in all
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