We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
850 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 17 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
SYNJ1
ENSSSCG00000012035
ENSG00000159082
Synaptojanin 1
Tissue enhanced
Detected in all
brain:
43.7
SYT14
ENSSSCG00000015610
ENSG00000143469
Synaptotagmin 14
Tissue enhanced
Detected in some
brain:
15.0
pineal gland:
13.4
pituitary gland:
14.0
retina:
21.4
SYT2
ENSSSCG00000010926
ENSG00000143858
Synaptotagmin 2
Tissue enriched
Detected in some
brain:
29.0
SZT2
ENSSSCG00000003941
ENSG00000198198
SZT2, KICSTOR complex subunit
Low tissue specificity
Detected in all
TACSTD2
ENSSSCG00000003832
ENSG00000184292
Tumor associated calcium signal transducer 2
Tissue enhanced
Detected in many
cornea:
60.8
upper respiratory system:
52.2
urinary bladder:
76.7
TBCD
ENSSSCG00000017136
ENSG00000141556
Tubulin-specific chaperone D
Low tissue specificity
Detected in all
TBK1
ENSSSCG00000031103
ENSG00000183735
Serine/threonine-protein kinase TBK1
Low tissue specificity
Detected in all
TCF4
ENSSSCG00000004535
ENSG00000196628
Transcription factor 4
Tissue enhanced
Detected in all
cartilage:
122.8
TDP1
ENSSSCG00000002431
ENSG00000042088
Tyrosyl-DNA phosphodiesterase 1
Low tissue specificity
Detected in all
TDP2
ENSSSCG00000001092
ENSG00000111802
Tyrosyl-DNA phosphodiesterase 2
Low tissue specificity
Detected in all
TDRD7
ENSSSCG00000005364
ENSG00000196116
Tudor domain containing 7
Tissue enriched
Detected in many
lens:
392.7
TEAD1
ENSSSCG00000013399
ENSG00000187079
Transcriptional enhancer factor TEF-1
Tissue enhanced
Detected in all
skeletal muscle:
79.7
TECPR2
ENSSSCG00000002528
ENSG00000196663
Tectonin beta-propeller repeat containing 2
Low tissue specificity
Detected in all
TECTA
ENSSSCG00000023728
ENSG00000109927
Tectorin alpha
Low tissue specificity
Detected in all
TENM4
ENSSSCG00000014894
ENSG00000149256
Teneurin transmembrane protein 4
Low tissue specificity
Detected in many
TFG
ENSSSCG00000011961
ENSG00000114354
TRK-fused gene
Low tissue specificity
Detected in all
TGFBI
ENSSSCG00000014316
ENSG00000120708
Transforming growth factor beta induced
Tissue enhanced
Detected in many
cartilage:
147.5
cornea:
213.4
TGM6
ENSSSCG00000034528
ENSG00000166948
Transglutaminase 6
Tissue enriched
Detected in some
skin:
19.3
TH
ENSSSCG00000039767
ENSG00000180176
Tyrosine hydroxylase
Group enriched
Detected in some
adrenal gland:
80.4
brain:
136.9
THAP1
ENSSSCG00000039969
ENSG00000131931
THAP domain containing 1
Low tissue specificity
Detected in all
TIMM8A
ENSSSCG00000012494
ENSG00000126953
Translocase of inner mitochondrial membrane 8A
Low tissue specificity
Detected in all
TIMP3
ENSSSCG00000031866
ENSG00000100234
TIMP metallopeptidase inhibitor 3
Low tissue specificity
Detected in all
TLR4
ENSSSCG00000005503
ENSG00000136869
Toll-like receptor 4 isoform 1 precursor
Tissue enhanced
Detected in many
male glands:
40.1
TMC1
ENSSSCG00000005266
ENSG00000165091
Transmembrane channel like 1
Tissue enhanced
Detected in many
epididymis:
15.6
fallopian tube:
16.3
testis:
11.7
TMEM240
ENSSSCG00000038530
ENSG00000205090
Transmembrane protein 240
Tissue enhanced
Detected in many
brain:
11.1
TMIE
ENSSSCG00000038857
ENSG00000181585
Transmembrane inner ear
Group enriched
Detected in some
brain:
23.0
pituitary gland:
30.2
TMPRSS3
ENSSSCG00000022568
ENSG00000160183
Transmembrane serine protease 3
Tissue enriched
Detected in some
stomach:
21.2
TNC
ENSSSCG00000005494
ENSG00000041982
Tenascin precursor
Tissue enhanced
Detected in many
cartilage:
169.5
smooth muscle:
64.2
synovial tissue:
56.1
TNFRSF1A
ENSSSCG00000000708
ENSG00000067182
Tumor necrosis factor receptor superfamily member 1A precursor
Low tissue specificity
Detected in all
TNRC6A
ENSSSCG00000038870
ENSG00000090905
Trinucleotide repeat containing 6A
Low tissue specificity
Detected in all
TOE1
ENSSSCG00000003918
ENSG00000132773
Target of EGR1, exonuclease
Low tissue specificity
Detected in all
TOPORS
ENSSSCG00000011004
ENSG00000197579
TOP1 binding arginine/serine rich protein
Low tissue specificity
Detected in all
TOR1A
ENSSSCG00000034518
ENSG00000136827
Torsin-1A precursor
Low tissue specificity
Detected in all
TP53
ENSSSCG00000017950
ENSG00000141510
Cellular tumor antigen p53
Low tissue specificity
Detected in all
TPP1
ENSSSCG00000023080
ENSG00000166340
Tripeptidyl peptidase 1
Low tissue specificity
Detected in all
TPRN
ENSSSCG00000036027
ENSG00000176058
Taperin
Tissue enhanced
Detected in all
stomach:
34.0
TREX1
ENSSSCG00000011358
ENSG00000213689
Three prime repair exonuclease 1
Tissue enhanced
Detected in all
lens:
42.0
TRIM2
ENSSSCG00000029200
ENSG00000109654
Tripartite motif containing 2
Low tissue specificity
Detected in all
TRPC3
ENSSSCG00000009092
ENSG00000138741
Short transient receptor potential channel 3
Tissue enhanced
Detected in many
brain:
12.6
lymphoid tissue:
10.3
TRPM1
ENSSSCG00000004843
ENSG00000134160
Transient receptor potential cation channel subfamily M member 1
Tissue enriched
Detected in single
retina:
50.8
TRPM7
ENSSSCG00000004636
ENSG00000092439
Transient receptor potential cation channel subfamily M member 7
Low tissue specificity
Detected in all
TRPV4
ENSSSCG00000009929
ENSG00000111199
Transient receptor potential cation channel subfamily V member 4
Tissue enriched
Detected in many
cartilage:
99.6
TSC2
ENSSSCG00000008040
ENSG00000103197
TSC complex subunit 2
Low tissue specificity
Detected in all
TSEN2
ENSSSCG00000011580
ENSG00000154743
TRNA splicing endonuclease subunit 2
Low tissue specificity
Detected in all
TSEN34
ENSSSCG00000003268
ENSG00000170892
TRNA splicing endonuclease subunit 34
Low tissue specificity
Detected in all
TSEN54
ENSSSCG00000036852
ENSG00000182173
TRNA splicing endonuclease subunit 54
Low tissue specificity
Detected in all
TSPAN12
ENSSSCG00000016620
ENSG00000106025
Tetraspanin-12
Tissue enhanced
Detected in all
heart:
63.7
TSPEAR
ENSSSCG00000022988
ENSG00000175894
Thrombospondin type laminin G domain and EAR repeats
Tissue enhanced
Detected in some
lymphoid tissue:
5.9
mouth:
8.0
skin:
6.6
upper respiratory system:
5.2
TSPYL1
ENSSSCG00000004438
ENSG00000189241
TSPY like 1
Low tissue specificity
Detected in all
TTBK2
ENSSSCG00000004718
ENSG00000128881
Tau tubulin kinase 2
Low tissue specificity
Detected in all
« prev
| Page
of 17 |
next »