We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
850 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
Page
of 17 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
AARS2
ENSSSCG00000001706
ENSG00000124608
Alanyl-tRNA synthetase 2, mitochondrial
Low tissue specificity
Detected in all
ABCA4
ENSSSCG00000006890
ENSG00000198691
ATP binding cassette subfamily A member 4
Tissue enriched
Detected in some
retina:
95.8
ABHD12
ENSSSCG00000040449
ENSG00000100997
Abhydrolase domain containing 12
Tissue enhanced
Detected in all
epididymis:
34.9
lens:
116.2
ACO2
ENSSSCG00000000064
ENSG00000100412
Aconitate hydratase, mitochondrial precursor
Tissue enhanced
Detected in all
heart:
137.6
skeletal muscle:
155.2
ACTG1
ENSSSCG00000028355
ENSG00000184009
Actin gamma 1
Low tissue specificity
Detected in all
ADAM22
ENSSSCG00000015297
ENSG00000008277
ADAM metallopeptidase domain 22
Tissue enriched
Detected in many
brain:
51.4
ADAM9
ENSSSCG00000015808
ENSG00000168615
ADAM metallopeptidase domain 9
Low tissue specificity
Detected in all
ADCY1
ENSSSCG00000016726
ENSG00000164742
Adenylate cyclase 1
Group enriched
Detected in some
brain:
51.5
lens:
21.6
retina:
23.4
ADCY5
ENSSSCG00000027952
ENSG00000173175
Adenylate cyclase 5
Tissue enriched
Detected in many
brain:
73.5
ADD3
ENSSSCG00000010621
ENSG00000148700
Adducin 3
Low tissue specificity
Detected in all
ADGRV1
ENSSSCG00000035025
ENSG00000164199
Adhesion G protein-coupled receptor V1
Tissue enhanced
Detected in many
choroid plexus:
71.4
pineal gland:
18.8
retina:
25.8
AFG3L2
ENSSSCG00000022947
ENSG00000141385
AFG3 like matrix AAA peptidase subunit 2
Low tissue specificity
Detected in all
AGBL5
ENSSSCG00000008558
ENSG00000084693
ATP/GTP binding protein like 5
Tissue enriched
Detected in all
testis:
123.7
AGK
ENSSSCG00000016492
ENSG00000006530
Acylglycerol kinase, mitochondrial
Low tissue specificity
Detected in all
AGRN
ENSSSCG00000022204
ENSG00000188157
Agrin
Low tissue specificity
Detected in all
AIFM1
ENSSSCG00000012657
ENSG00000156709
Apoptosis-inducing factor 1, mitochondrial
Low tissue specificity
Detected in all
AIPL1
ENSSSCG00000022026
ENSG00000129221
Aryl hydrocarbon receptor interacting protein like 1
Tissue enriched
Detected in some
retina:
79.2
ALDH18A1
ENSSSCG00000010495
ENSG00000059573
Aldehyde dehydrogenase 18 family member A1
Tissue enhanced
Detected in many
male glands:
70.8
ALDH7A1
ENSSSCG00000014247
ENSG00000164904
Aldehyde dehydrogenase 7 family member A1
Tissue enhanced
Detected in all
liver:
72.6
ALG13
ENSSSCG00000012586
ENSG00000101901
ALG13, UDP-N-acetylglucosaminyltransferase subunit
Low tissue specificity
Detected in all
ALG14
ENSSSCG00000006885
ENSG00000172339
ALG14, UDP-N-acetylglucosaminyltransferase subunit
Low tissue specificity
Detected in all
ALG2
ENSSSCG00000005383
ENSG00000119523
Alpha-1,3/1,6-mannosyltransferase ALG2
Tissue enriched
Detected in all
male glands:
68.2
ALS2
ENSSSCG00000016109
ENSG00000003393
ALS2, alsin Rho guanine nucleotide exchange factor
Tissue enhanced
Detected in all
brain:
52.3
lens:
46.4
AMPD2
ENSSSCG00000031125
ENSG00000116337
Adenosine monophosphate deaminase 2
Low tissue specificity
Detected in all
ANG
ENSSSCG00000031538
ENSG00000214274
Angiogenin
Tissue enhanced
Detected in many
liver:
105.2
ANO10
ENSSSCG00000011296
ENSG00000160746
Anoctamin 10
Low tissue specificity
Detected in all
ANO3
ENSSSCG00000013339
ENSG00000134343
Anoctamin 3
Group enriched
Detected in many
brain:
65.0
ovary:
30.2
AP3B2
ENSSSCG00000001807
ENSG00000103723
Adaptor related protein complex 3 beta 2 subunit
Tissue enhanced
Detected in many
brain:
22.5
pineal gland:
16.2
retina:
13.5
AP4B1
ENSSSCG00000006762
ENSG00000134262
Adaptor related protein complex 4 beta 1 subunit
Low tissue specificity
Detected in all
AP4E1
ENSSSCG00000004634
ENSG00000081014
Adaptor related protein complex 4 epsilon 1 subunit
Low tissue specificity
Detected in all
AP4M1
ENSSSCG00000034288
ENSG00000221838
Adaptor related protein complex 4 mu 1 subunit
Low tissue specificity
Detected in all
AP4S1
ENSSSCG00000001972
ENSG00000100478
AP-4 complex subunit sigma-1
Low tissue specificity
Detected in all
AP5Z1
ENSSSCG00000007577
ENSG00000242802
AP-5 complex subunit zeta-1
Low tissue specificity
Detected in all
APOA1
ENSSSCG00000030921
ENSG00000118137
Apolipoprotein A-I preproprotein
Group enriched
Detected in many
liver:
330.7
vagus nerve:
134.4
APOE
ENSSSCG00000003088
ENSG00000130203
Apolipoprotein E precursor
Tissue enriched
Detected in many
liver:
755.1
APP
ENSSSCG00000012022
ENSG00000142192
Amyloid-beta A4 protein N-APP Soluble APP-alpha Soluble APP-beta C99 Amyloid-beta protein 42 amyloid-beta protein 40 C83 P3(42) P3(40) C80 Gamma-secretase C-terminal fragment 59 Gamma-secretase C-terminal fragment 57 Gamma-secretase C-terminal fragment 50 C31
Low tissue specificity
Detected in all
APTX
ENSSSCG00000011001
ENSG00000137074
Aprataxin
Low tissue specificity
Detected in all
AQP4
ENSSSCG00000035965
ENSG00000171885
Aquaporin-4
Group enriched
Detected in some
brain:
138.1
pineal gland:
88.9
AR
ENSSSCG00000012371
ENSG00000169083
Androgen receptor
Tissue enhanced
Detected in many
cervix:
42.8
ARHGEF9
ENSSSCG00000012362
ENSG00000131089
Cdc42 guanine nucleotide exchange factor 9
Tissue enhanced
Detected in many
brain:
38.2
pineal gland:
35.1
ARL2BP
ENSSSCG00000002819
ENSG00000102931
ADP ribosylation factor like GTPase 2 binding protein
Low tissue specificity
Detected in all
ARL6
ENSSSCG00000027278
ENSG00000113966
ADP ribosylation factor like GTPase 6
Low tissue specificity
Detected in all
ARR3
ENSSSCG00000012379
ENSG00000120500
Arrestin-C
Tissue enriched
Detected in single
retina:
137.5
ARV1
ENSSSCG00000010179
ENSG00000173409
Protein ARV1
Tissue enhanced
Detected in all
brain:
33.1
ARX
ENSSSCG00000020801
ENSG00000004848
Aristaless related homeobox
Group enriched
Detected in some
brain:
19.5
ovary:
19.2
skeletal muscle:
16.1
ASB10
ENSSSCG00000029241
ENSG00000146926
Ankyrin repeat and SOCS box containing 10
Tissue enhanced
Detected in some
heart:
26.0
skeletal muscle:
45.9
ASCL1
ENSSSCG00000034557
ENSG00000139352
Achaete-scute family bHLH transcription factor 1
Tissue enhanced
Detected in some
brain:
17.4
liver:
10.7
pituitary gland:
40.4
thyroid gland:
11.5
ASPA
ENSSSCG00000017861
ENSG00000108381
Aspartoacylase
Tissue enhanced
Detected in many
brain:
56.0
kidney:
19.8
vagus nerve:
32.5
ATAD1
ENSSSCG00000010438
ENSG00000138138
ATPase family, AAA domain containing 1
Low tissue specificity
Detected in all
ATCAY
ENSSSCG00000026754
ENSG00000167654
ATCAY, caytaxin
Group enriched
Detected in some
brain:
33.1
pineal gland:
17.0
pituitary gland:
12.7
retina:
11.3
Page
of 17 |
next »
MENU
