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Human disease related genes
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Keyword
Chromosome
1
2
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6
7
8
9
10
11
12
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Lymphoid tissue
Male glands
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Skin
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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912 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
EVC2
ENSSSCG00000024399
ENSG00000173040
EvC ciliary complex subunit 2
Tissue enhanced
Detected in all
kidney:
32.2
EXPH5
ENSSSCG00000015010
ENSG00000110723
Exophilin 5
Tissue enhanced
Detected in many
liver:
32.8
skin:
45.3
EXT1
ENSSSCG00000006009
ENSG00000182197
Exostosin glycosyltransferase 1
Low tissue specificity
Detected in all
EXT2
ENSSSCG00000013281
ENSG00000151348
Exostosin glycosyltransferase 2
Low tissue specificity
Detected in all
EYA1
ENSSSCG00000040728
ENSG00000104313
EYA transcriptional coactivator and phosphatase 1
Tissue enhanced
Detected in many
pituitary gland:
30.6
upper respiratory system:
37.1
EZH2
ENSSSCG00000028840
ENSG00000106462
Histone-lysine N-methyltransferase EZH2
Tissue enhanced
Detected in all
lymphoid tissue:
51.5
testis:
48.3
FAM111A
ENSSSCG00000033703
ENSG00000166801
Family with sequence similarity 111 member A
Low tissue specificity
Detected in many
FAM20C
ENSSSCG00000020813
ENSG00000177706
FAM20C, golgi associated secretory pathway kinase
Tissue enhanced
Detected in all
cartilage:
47.3
FAR1
ENSSSCG00000021170
ENSG00000197601
Fatty acyl-CoA reductase 1
Tissue enhanced
Detected in all
male glands:
76.8
FAT4
ENSSSCG00000036155
ENSG00000196159
FAT atypical cadherin 4
Low tissue specificity
Detected in many
FBLN1
ENSSSCG00000000010
ENSG00000077942
Fibulin 1
Tissue enhanced
Detected in all
cartilage:
101.9
FBLN5
ENSSSCG00000002444
ENSG00000140092
Fibulin 5
Tissue enhanced
Detected in many
ovary:
46.7
FBN1
ENSSSCG00000004658
ENSG00000166147
Fibrillin-1 precursor
Tissue enhanced
Detected in many
mesothelial tissue:
106.5
FBN2
ENSSSCG00000014256
ENSG00000138829
Fibrillin 2
Tissue enhanced
Detected in many
cartilage:
18.2
ductus deferens:
24.9
pituitary gland:
20.0
FBXL3
ENSSSCG00000009472
ENSG00000005812
F-box and leucine rich repeat protein 3
Low tissue specificity
Detected in all
FDPS
ENSSSCG00000006512
ENSG00000160752
Farnesyl pyrophosphate synthase precursor
Low tissue specificity
Detected in all
FGD1
ENSSSCG00000012335
ENSG00000102302
FYVE, RhoGEF and PH domain containing 1
Low tissue specificity
Detected in all
FGF10
ENSSSCG00000016878
ENSG00000070193
Fibroblast growth factor 10
Tissue enhanced
Detected in many
adipose tissue:
19.1
cornea:
40.9
FGF16
ENSSSCG00000022833
ENSG00000196468
Fibroblast growth factor 16
Tissue enhanced
Detected in some
adipose tissue:
4.7
heart:
7.4
mesothelial tissue:
4.2
FGF20
ENSSSCG00000006980
ENSG00000078579
Fibroblast growth factor 20
Tissue enhanced
Detected in some
brain:
8.6
pituitary gland:
1.8
stomach:
1.7
upper respiratory system:
2.2
FGF3
ENSSSCG00000012872
ENSG00000186895
Fibroblast growth factor 3
Tissue enhanced
Detected in some
lymphoid tissue:
4.0
small intestine:
1.7
upper respiratory system:
3.2
FGF9
ENSSSCG00000009278
ENSG00000102678
Fibroblast growth factor 9
Tissue enhanced
Detected in many
adrenal gland:
30.5
kidney:
21.7
FGFR1
ENSSSCG00000015815
ENSG00000077782
Fibroblast growth factor receptor 1
Tissue enhanced
Detected in all
cartilage:
88.1
FGFR2
ENSSSCG00000010698
ENSG00000066468
Fibroblast growth factor receptor 2 precursor
Tissue enhanced
Detected in many
cartilage:
96.5
lens:
85.2
FGFR3
ENSSSCG00000030827
ENSG00000068078
Fibroblast growth factor receptor 3
Tissue enhanced
Detected in many
lens:
40.2
male glands:
41.9
FIBP
ENSSSCG00000012969
ENSG00000172500
Acidic fibroblast growth factor intracellular-binding protein
Low tissue specificity
Detected in all
FIG4
ENSSSCG00000004405
ENSG00000112367
Polyphosphoinositide phosphatase
Low tissue specificity
Detected in all
FKBP10
ENSSSCG00000017422
ENSG00000141756
Peptidyl-prolyl cis-trans isomerase FKBP10 precursor
Tissue enhanced
Detected in many
cartilage:
54.7
FKBP14
ENSSSCG00000037575
ENSG00000106080
Peptidyl-prolyl cis-trans isomerase FKBP14 precursor
Low tissue specificity
Detected in all
FKRP
ENSSSCG00000003103
ENSG00000181027
Fukutin related protein
Low tissue specificity
Detected in all
FKTN
ENSSSCG00000005427
ENSG00000106692
Fukutin
Low tissue specificity
Detected in all
FLNB
ENSSSCG00000011471
ENSG00000136068
Filamin B
Low tissue specificity
Detected in all
FLT4
ENSSSCG00000014007
ENSG00000037280
Fms related tyrosine kinase 4
Low tissue specificity
Detected in many
FN1
ENSSSCG00000016174
ENSG00000115414
Fibronectin 1
Tissue enhanced
Detected in many
adipose tissue:
168.3
male glands:
433.9
synovial tissue:
420.5
FOXC1
ENSSSCG00000039756
ENSG00000054598
Forkhead box C1
Tissue enhanced
Detected in many
cartilage:
121.3
salivary gland:
38.6
FOXC2
ENSSSCG00000029296
ENSG00000176692
Forkhead box C2
Tissue enhanced
Detected in many
cartilage:
61.3
penis:
46.1
vagus nerve:
63.1
FOXE3
ENSSSCG00000003884
ENSG00000186790
Forkhead box E3
Tissue enriched
Detected in some
lens:
18.8
FRAS1
ENSSSCG00000008991
ENSG00000138759
Fraser extracellular matrix complex subunit 1
Tissue enhanced
Detected in many
heart:
40.1
FREM1
ENSSSCG00000039025
ENSG00000164946
FRAS1 related extracellular matrix 1
Tissue enhanced
Detected in many
choroid plexus:
30.0
kidney:
39.0
FREM2
ENSSSCG00000009364
ENSG00000150893
FRAS1 related extracellular matrix protein 2
Tissue enhanced
Detected in many
choroid plexus:
53.6
kidney:
23.0
thyroid gland:
23.4
FRMD4A
ENSSSCG00000011056
ENSG00000151474
FERM domain containing 4A
Low tissue specificity
Detected in all
FTO
ENSSSCG00000035949
ENSG00000140718
Alpha-ketoglutarate-dependent dioxygenase FTO
Low tissue specificity
Detected in all
FZD2
ENSSSCG00000029838
ENSG00000180340
Frizzled-2 precursor
Tissue enhanced
Detected in many
vagus nerve:
45.7
G6PC3
ENSSSCG00000017365
ENSG00000141349
Glucose-6-phosphatase catalytic subunit 3
Low tissue specificity
Detected in all
GANAB
ENSSSCG00000030653
ENSG00000089597
Neutral alpha-glucosidase AB precursor
Low tissue specificity
Detected in all
GATA3
ENSSSCG00000011125
ENSG00000107485
Trans-acting T-cell-specific transcription factor GATA-3
Tissue enhanced
Detected in many
kidney:
50.6
male glands:
129.9
skin:
97.0
urinary bladder:
53.3
GATA5
ENSSSCG00000007538
ENSG00000130700
GATA binding protein 5
Tissue enhanced
Detected in many
adipose tissue:
32.2
mesothelial tissue:
60.4
small intestine:
29.7
stomach:
45.3
GATA6
ENSSSCG00000003702
ENSG00000141448
Transcription factor GATA-6
Tissue enhanced
Detected in many
adrenal gland:
48.9
heart:
39.4
ovary:
36.9
stomach:
41.6
GDF3
ENSSSCG00000000669
ENSG00000184344
Growth differentiation factor 3
Group enriched
Detected in some
testis:
4.7
thyroid gland:
5.6
GDF5
ENSSSCG00000023261
ENSG00000125965
Growth/differentiation factor 5 precursor
Tissue enriched
Detected in some
cartilage:
61.3
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